AT1G50590 : -
Query Information
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AGICode AT1G50590
Description RmlC-like cupins superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G50590 RmlC-like cupins superfamily protein 1 0.3 -0.31
2 AT1G07610 metallothionein 1C metallothionein 1C -0.73 0.33 -0.31
3 AT3G59020 ARM repeat superfamily protein -0.7 0.3 -0.33
4 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.3 -0.33
5 AT3G09260 Glycosyl hydrolase superfamily protein BGLU23, LONG ER BODY, PSR3.1,
PYK10		 -0.67 0.31 -0.32
6 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 -0.67 0.32 -0.31
7 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 -0.67 0.29 -0.32
8 AT4G30190 H(+)-ATPase 2 H(+)-ATPase 2, H(+)-ATPase 2,
PLASMA MEMBRANE PROTON ATPASE 2		 -0.67 0.32 -0.32
9 AT2G22490 Cyclin D2;1 ATCYCD2;1, Cyclin D2;1 -0.67 0.31 -0.32
10 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 -0.66 0.34 -0.34
11 AT1G19330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits
to 145 proteins in 43 species: Archae - 0; Bacteria - 0;
Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.66 0.35 -0.31
12 AT5G07680 NAC domain containing protein 80 Arabidopsis NAC domain containing
protein 79, NAC domain containing
protein 80, ATNAC4, NAC domain
containing protein 80		 -0.66 0.31 -0.3
13 AT2G37890 Mitochondrial substrate carrier family protein -0.65 0.3 -0.3
14 AT5G26830 Threonyl-tRNA synthetase -0.65 0.31 -0.3
15 AT5G17820 Peroxidase superfamily protein -0.65 0.31 -0.31
16 AT5G53460 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase
1		 -0.65 0.36 -0.3
17 AT3G43600 aldehyde oxidase 2 aldehyde oxidase 2, aldehyde
oxidase 3, Aldehyde oxidase gamma,
Arabidopsis thaliana aldehyde
oxidase 2, Arabidopsis thaliana
aldehyde oxidase 3		 -0.64 0.32 -0.31
18 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 -0.64 0.32 -0.3
19 AT2G40750 WRKY DNA-binding protein 54 WRKY DNA-BINDING PROTEIN 54, WRKY
DNA-binding protein 54		 0.64 0.31 -0.34
20 AT3G48990 AMP-dependent synthetase and ligase family protein -0.63 0.32 -0.33
21 AT1G77840 Translation initiation factor IF2/IF5 -0.63 0.33 -0.28
22 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 -0.63 0.31 -0.31
23 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 -0.63 0.34 -0.32
24 AT3G50000 casein kinase II, alpha chain 2 ATCKA2, casein kinase II, alpha
chain 2		 -0.63 0.33 -0.31
25 AT5G61140 U5 small nuclear ribonucleoprotein helicase -0.62 0.31 -0.31
26 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 0.62 0.33 -0.31
27 AT3G06720 importin alpha isoform 1 IMPORTIN ALPHA, AT-IMP, ATKAP
ALPHA, importin alpha isoform 1,
IMPORTIN ALPHA ISOFORM 1		 -0.62 0.3 -0.32
28 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain -0.62 0.31 -0.32
29 AT1G72750 translocase inner membrane subunit 23-2 translocase inner membrane subunit
23-2, translocase inner membrane
subunit 23-2		 -0.62 0.3 -0.29
30 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.62 0.32 -0.33
31 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G 0.62 0.3 -0.31
32 AT2G07705 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G65346.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.3
33 AT5G06480 Immunoglobulin E-set superfamily protein 0.61 0.33 -0.32
34 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.31 -0.3
35 AT1G20640 Plant regulator RWP-RK family protein 0.61 0.36 -0.32
36 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 0.61 0.31 -0.32
37 AT1G74420 fucosyltransferase 3 ATFUT3, fucosyltransferase 3 0.61 0.31 -0.33
38 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 -0.61 0.31 -0.3
39 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 -0.61 0.33 -0.34
40 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 -0.61 0.32 -0.31
41 AT1G34580 Major facilitator superfamily protein 0.61 0.32 -0.3
42 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 -0.6 0.31 -0.3
43 AT5G09850 Transcription elongation factor (TFIIS) family protein -0.6 0.31 -0.32
44 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 0.6 0.33 -0.35
45 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 -0.6 0.3 -0.32
46 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 0.6 0.33 -0.31
47 AT3G02710 ARM repeat superfamily protein -0.59 0.31 -0.32
48 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 0.59 0.32 -0.28
49 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 -0.59 0.29 -0.31
50 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 0.59 0.32 -0.31
51 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 -0.59 0.32 -0.31
52 AT2G38010 Neutral/alkaline non-lysosomal ceramidase 0.59 0.32 -0.32
53 AT4G21140 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.59 0.29 -0.31
54 AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.59 0.32 -0.32
55 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 0.59 0.32 -0.3
56 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.31 -0.31
57 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein -0.58 0.32 -0.3
58 AT5G06610 Protein of unknown function (DUF620) 0.58 0.3 -0.32
59 AT4G20840 FAD-binding Berberine family protein -0.58 0.32 -0.34
60 AT5G13110 glucose-6-phosphate dehydrogenase 2 glucose-6-phosphate dehydrogenase
2		 -0.58 0.32 -0.32
61 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 0.58 0.3 -0.32
62 AT1G36060 Integrase-type DNA-binding superfamily protein -0.58 0.32 -0.32
63 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 0.58 0.31 -0.3
64 AT1G23280 MAK16 protein-related -0.58 0.33 -0.32
65 AT4G05390 root FNR 1 root FNR 1, root FNR 1 -0.58 0.32 -0.3
66 AT5G08230 Tudor/PWWP/MBT domain-containing protein 0.58 0.33 -0.32
67 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 -0.58 0.3 -0.32
68 AT1G75800 Pathogenesis-related thaumatin superfamily protein 0.58 0.33 -0.32
69 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 -0.58 0.31 -0.31
70 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 -0.57 0.32 -0.3
71 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.32
72 AT4G29100 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.57 0.34 -0.3
73 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 -0.57 0.3 -0.31
74 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.3
75 AT5G09220 amino acid permease 2 amino acid permease 2 0.56 0.29 -0.32
76 AT4G25160 U-box domain-containing protein kinase family protein -0.56 0.33 -0.31
77 AT1G17960 Threonyl-tRNA synthetase -0.56 0.31 -0.32
78 AT4G10090 elongator protein 6 elongator protein 6 -0.56 0.31 -0.32
79 AT5G52540 Protein of unknown function (DUF819) 0.56 0.29 -0.29
80 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 -0.56 0.33 -0.32
81 AT2G28200 C2H2-type zinc finger family protein -0.56 0.3 -0.32
82 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.36 -0.31
83 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.3
84 AT1G55570 SKU5 similar 12 SKU5 similar 12 0.55 0.3 -0.32
85 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 -0.55 0.3 -0.29
86 AT3G45610 Dof-type zinc finger DNA-binding family protein DOF transcription factor 6 0.54 0.3 -0.31
87 AT5G01720 RNI-like superfamily protein -0.54 0.32 -0.32
88 AT2G41830 Uncharacterized protein -0.54 0.31 -0.34
89 AT1G05370 Sec14p-like phosphatidylinositol transfer family protein 0.54 0.31 -0.31
90 AT5G11900 Translation initiation factor SUI1 family protein -0.54 0.34 -0.33
91 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 -0.54 0.32 -0.29
92 AT2G05600 F-box associated ubiquitination effector family protein 0.53 0.34 -0.34
93 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.3 -0.31
94 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 0.53 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.76 0.46 -0.45 C0010
96 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.73 0.45 -0.44 C0003
97 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.67 0.46 -0.47 C0016
98 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.67 0.43 -0.45 C0252
99 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.65 0.44 -0.45 C0035
100 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.63 0.47 -0.51 C0197