AT1G65940 : -
Query Information
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AGICode AT1G65940
Description pseudogene, similar to Dof zinc finger protein, blastp match of 61% identity and 1.7e-10 P-value to GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein {Oryza sativa}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G65940 pseudogene, similar to Dof zinc finger protein, blastp
match of 61% identity and 1.7e-10 P-value to
GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein
{Oryza sativa}		 1 0.32 -0.33
2 AT3G05490 ralf-like 22 ralf-like 22 0.75 0.31 -0.36
3 AT3G29430 Terpenoid synthases superfamily protein 0.73 0.33 -0.33
4 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 -0.73 0.31 -0.33
5 AT1G56160 myb domain protein 72 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 72, myb domain protein 72		 0.73 0.32 -0.3
6 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 0.72 0.33 -0.29
7 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.72 0.33 -0.32
8 AT4G07430 transposable element gene 0.72 0.33 -0.3
9 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 0.71 0.31 -0.31
10 AT4G07790 transposable element gene 0.71 0.32 -0.3
11 AT4G17260 Lactate/malate dehydrogenase family protein 0.71 0.3 -0.3
12 AT3G05280 Integral membrane Yip1 family protein 0.71 0.3 -0.31
13 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.7 0.3 -0.3
14 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 0.7 0.32 -0.3
15 AT2G36670 Eukaryotic aspartyl protease family protein -0.7 0.28 -0.33
16 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).		 0.7 0.32 -0.31
17 AT1G64820 MATE efflux family protein 0.7 0.31 -0.33
18 AT4G03040 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G33330.1); Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.34 -0.3
19 AT4G08490 transposable element gene -0.69 0.31 -0.31
20 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.69 0.29 -0.3
21 AT3G07330 Cellulose-synthase-like C6 ATCSLC06, Cellulose-synthase-like
C6, CELLULOSE-SYNTHASE LIKE C6,
Cellulose-synthase-like C6		 0.69 0.34 -0.31
22 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 0.68 0.33 -0.33
23 AT1G66210 Subtilisin-like serine endopeptidase family protein 0.68 0.33 -0.31
24 AT2G25820 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 2 0.68 0.34 -0.29
25 AT3G18450 PLAC8 family protein 0.68 0.29 -0.34
26 AT1G22290 14-3-3 family protein -0.68 0.3 -0.3
27 AT5G08210 MIR834a; miRNA microRNA834A -0.68 0.31 -0.33
28 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 0.68 0.31 -0.3
29 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 0.68 0.3 -0.33
30 AT1G52840 transposable element gene 0.67 0.31 -0.31
31 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 0.67 0.29 -0.3
32 AT4G03760 transposable element gene 0.67 0.29 -0.31
33 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 0.67 0.3 -0.34
34 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 -0.67 0.32 -0.3
35 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.31 -0.32
36 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.67 0.33 -0.31
37 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.67 0.33 -0.31
38 AT5G25430 HCO3- transporter family 0.67 0.31 -0.33
39 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 0.66 0.34 -0.3
40 AT5G14890 NHL domain-containing protein 0.66 0.33 -0.34
41 AT4G08620 sulphate transporter 1;1 sulphate transporter 1;1 0.66 0.31 -0.33
42 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 -0.66 0.31 -0.3
43 AT5G49945 Protein of unknown function (DUF1682) 0.66 0.31 -0.31
44 AT3G25850 Cysteine/Histidine-rich C1 domain family protein 0.66 0.31 -0.32
45 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.66 0.32 -0.31
46 AT1G25240 ENTH/VHS/GAT family protein 0.66 0.31 -0.3
47 AT3G49300 proline-rich family protein -0.66 0.32 -0.33
48 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.31 -0.3
49 AT3G62330 Zinc knuckle (CCHC-type) family protein -0.65 0.33 -0.3
50 AT1G61750 Receptor-like protein kinase-related family protein 0.65 0.31 -0.32
51 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).		 -0.65 0.32 -0.31
52 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.65 0.31 -0.34
53 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.31
54 AT4G10370 Cysteine/Histidine-rich C1 domain family protein 0.65 0.32 -0.31
55 AT3G19880 F-box and associated interaction domains-containing protein -0.64 0.31 -0.32
56 AT1G02740 MRG family protein 0.64 0.34 -0.3
57 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.64 0.31 -0.33
58 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.64 0.32 -0.31
59 AT5G58910 laccase 16 laccase 16 0.64 0.3 -0.32
60 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.31 -0.31
61 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.64 0.32 -0.31
62 AT1G64030 serpin 3 ATSRP3, serpin 3 0.64 0.3 -0.31
63 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 -0.64 0.32 -0.3
64 AT1G33900 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.33
65 AT2G37140 Terpenoid synthases superfamily protein 0.64 0.31 -0.3
66 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.63 0.3 -0.31
67 AT4G17760 damaged DNA binding;exodeoxyribonuclease IIIs 0.63 0.3 -0.32
68 AT1G21430 Flavin-binding monooxygenase family protein YUC11 -0.63 0.31 -0.32
69 AT1G72290 Kunitz family trypsin and protease inhibitor protein -0.63 0.31 -0.31
70 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.63 0.31 -0.29
71 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.29 -0.31
72 AT2G11590 transposable element gene -0.63 0.31 -0.31
73 AT5G17720 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.3
74 AT4G25800 Calmodulin-binding protein -0.63 0.33 -0.32
75 AT5G50020 DHHC-type zinc finger family protein 0.63 0.32 -0.34
76 AT1G23240 Caleosin-related family protein 0.63 0.32 -0.3
77 AT3G19020 Leucine-rich repeat (LRR) family protein 0.62 0.31 -0.32
78 AT1G23520 Domain of unknown function (DUF220) -0.62 0.32 -0.31
79 AT2G30690 Protein of unknown function, DUF593 0.62 0.31 -0.31
80 AT1G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.31 -0.3
81 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 -0.62 0.32 -0.34
82 AT1G36910 transposable element gene 0.62 0.32 -0.32
83 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.62 0.31 -0.32
84 AT3G61640 arabinogalactan protein 20 arabinogalactan protein 20,
Arabinogalactan protein 20		 0.62 0.33 -0.32
85 AT5G01690 cation/H+ exchanger 27 ARABIDOPSIS THALIANA
CATION/HYDROGEN EXCHANGER 27,
cation/H+ exchanger 27		 0.62 0.31 -0.32
86 AT3G49270 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING:
4 anthesis, C globular stage, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: proline-rich family protein (TAIR:AT3G49300.1); Has 63
Blast hits to 43 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 31; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.62 0.32 -0.31
87 AT4G32950 Protein phosphatase 2C family protein 0.62 0.33 -0.32
88 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 0.62 0.33 -0.29
89 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 0.61 0.33 -0.32
90 AT3G52310 ABC-2 type transporter family protein ATP-binding cassette G27 -0.61 0.31 -0.29
91 AT3G51760 Protein of unknown function (DUF688) 0.61 0.3 -0.32
92 AT5G35470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.3 -0.32
93 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.32 -0.32
94 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.33 -0.32
95 AT5G09430 alpha/beta-Hydrolases superfamily protein 0.61 0.3 -0.3
96 AT2G29600 Galactose oxidase/kelch repeat superfamily protein 0.61 0.3 -0.33
97 AT5G22555 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.36 -0.31
98 AT4G33020 ZIP metal ion transporter family ATZIP9, ZIP9 0.61 0.32 -0.3
99 AT1G21300 transposable element gene 0.61 0.3 -0.32
100 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 -0.61 0.31 -0.3
101 AT4G10780 LRR and NB-ARC domains-containing disease resistance
protein		 0.61 0.31 -0.34
102 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 -0.61 0.32 -0.3
103 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 0.61 0.33 -0.32
104 AT3G12950 Trypsin family protein -0.6 0.3 -0.33
105 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.32 -0.32
106 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.6 0.32 -0.32
107 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 -0.6 0.29 -0.31
108 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 -0.6 0.33 -0.31
109 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 -0.6 0.32 -0.27
110 AT4G32860 unknown protein; Has 46 Blast hits to 46 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
111 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 -0.59 0.33 -0.33
112 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.59 0.3 -0.32
113 AT1G62680 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.32 -0.31
114 AT5G48270 Plant protein of unknown function (DUF868) -0.59 0.32 -0.31
115 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase -0.59 0.34 -0.34
116 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.59 0.32 -0.3
117 AT5G66960 Prolyl oligopeptidase family protein -0.59 0.29 -0.32
118 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.59 0.31 -0.29
119 AT4G10640 IQ-domain 16 IQ-domain 16 -0.59 0.33 -0.34
120 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.59 0.33 -0.33
121 AT4G09360 NB-ARC domain-containing disease resistance protein -0.59 0.32 -0.3
122 AT2G27940 RING/U-box superfamily protein -0.58 0.31 -0.32
123 AT3G42540 transposable element gene -0.58 0.33 -0.31
124 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.58 0.31 -0.33
125 AT1G77820 transposable element gene -0.57 0.3 -0.33
126 AT2G35585 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits
to 67 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.32
127 AT1G25360 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.33
128 AT4G14820 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.3 -0.3
129 AT4G07586 transposable element gene -0.57 0.32 -0.29
130 AT3G20620 F-box family protein-related -0.57 0.32 -0.32
131 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 -0.57 0.34 -0.32
132 AT3G31360 transposable element gene -0.57 0.3 -0.31