AT1G35513 : -
Query Information
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AGICode AT1G35513
Description pseudogene of isochorismate synthase-related / isochorismate mutase-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 1 0.32 -0.32
2 AT5G46140 Protein of unknown function (DUF295) 0.72 0.32 -0.31
3 AT1G56290 CwfJ-like family protein -0.7 0.31 -0.3
4 AT5G30480 transposable element gene -0.68 0.33 -0.31
5 AT3G59270 FBD-like domain family protein 0.68 0.32 -0.34
6 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 0.68 0.32 -0.32
7 AT2G43150 Proline-rich extensin-like family protein 0.68 0.31 -0.31
8 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.3 -0.31
9 AT2G04490 transposable element gene 0.67 0.3 -0.33
10 AT5G05670 signal recognition particle binding -0.67 0.3 -0.32
11 AT2G38520 transposable element gene 0.67 0.32 -0.31
12 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.66 0.29 -0.32
13 AT3G18350 Plant protein of unknown function (DUF639) 0.66 0.31 -0.31
14 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.3 -0.32
15 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 -0.65 0.33 -0.33
16 AT5G51250 Galactose oxidase/kelch repeat superfamily protein 0.65 0.33 -0.3
17 AT5G63390 O-fucosyltransferase family protein 0.65 0.33 -0.29
18 AT1G15590 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.32 -0.33
19 AT4G36000 Pathogenesis-related thaumatin superfamily protein -0.64 0.32 -0.32
20 AT5G16310 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH1 -0.64 0.31 -0.31
21 AT5G41850 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.3
22 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 0.63 0.32 -0.3
23 AT3G30510 transposable element gene -0.63 0.3 -0.34
24 AT5G59460 scarecrow-like transcription factor 11 (SCL11) -0.63 0.29 -0.31
25 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 -0.63 0.33 -0.31
26 AT1G05070 Protein of unknown function (DUF1068) -0.63 0.3 -0.33
27 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 -0.62 0.32 -0.32
28 AT2G43260 F-box and associated interaction domains-containing protein -0.62 0.33 -0.31
29 AT1G01660 RING/U-box superfamily protein -0.62 0.31 -0.32
30 AT1G22970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits
to 132 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other
Eukaryotes - 10 (source: NCBI BLink).		 -0.61 0.3 -0.31
31 AT5G19790 related to AP2 11 related to AP2 11 -0.61 0.33 -0.31
32 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.33
33 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.29 -0.33
34 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.31 -0.31
35 AT2G45610 alpha/beta-Hydrolases superfamily protein 0.6 0.35 -0.33
36 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.6 0.31 -0.31
37 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.6 0.32 -0.29
38 AT5G51090 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.31
39 AT2G19130 S-locus lectin protein kinase family protein 0.59 0.31 -0.29
40 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.59 0.32 -0.3
41 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 -0.59 0.33 -0.33
42 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.34 -0.31
43 AT1G44414 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.34 -0.32
44 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.59 0.3 -0.32
45 AT5G58460 cation/H+ exchanger 25 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 25, cation/H+ exchanger
25		 0.59 0.3 -0.29
46 AT1G20135 GDSL-like Lipase/Acylhydrolase family protein 0.59 0.3 -0.3
47 AT4G38120 ARM repeat superfamily protein 0.59 0.3 -0.3
48 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 0.58 0.32 -0.34
49 AT2G32350 Ubiquitin-like superfamily protein 0.58 0.31 -0.33
50 AT3G46030 Histone superfamily protein HTB11 -0.58 0.3 -0.29
51 AT3G54080 Concanavalin A-like lectin family protein -0.58 0.32 -0.31
52 AT2G37800 Cysteine/Histidine-rich C1 domain family protein -0.58 0.33 -0.3
53 AT3G44430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G41660.1); Has 6 Blast
hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.34
54 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.58 0.32 -0.31
55 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.58 0.33 -0.32
56 AT5G02150 Fes1C Fes1C -0.57 0.31 -0.32
57 AT2G06700 transposable element gene 0.57 0.33 -0.31
58 AT5G52340 exocyst subunit exo70 family protein A2 exocyst subunit exo70 family
protein A2, exocyst subunit exo70
family protein A2		 -0.57 0.32 -0.33
59 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.57 0.3 -0.29
60 AT5G36190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: F-box
and associated interaction domains-containing protein
(TAIR:AT5G36200.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.33 -0.34
61 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 -0.57 0.33 -0.3
62 AT3G63020 Protein of unknown function (DUF3049) 0.57 0.32 -0.3
63 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.57 0.31 -0.33
64 AT3G18910 EIN2 targeting protein2 EIN2 targeting protein2 -0.57 0.32 -0.34
65 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.57 0.28 -0.32
66 AT1G41797 transposable element gene -0.57 0.31 -0.31
67 AT1G12720 transposable element gene 0.57 0.31 -0.3
68 AT4G07600 transposable element gene -0.56 0.31 -0.32
69 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 -0.56 0.32 -0.33
70 AT5G43530 Helicase protein with RING/U-box domain -0.56 0.3 -0.34
71 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.31
72 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.3 -0.32
73 AT1G78500 Terpenoid cyclases family protein -0.56 0.32 -0.34
74 AT2G14420 transposable element gene 0.56 0.33 -0.32
75 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.56 0.32 -0.3
76 AT2G07360 SH3 domain-containing protein 0.56 0.31 -0.32
77 AT1G21230 wall associated kinase 5 wall associated kinase 5 -0.56 0.3 -0.32
78 AT4G13390 Proline-rich extensin-like family protein extensin 12 -0.55 0.33 -0.3
79 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.55 0.32 -0.33
80 AT1G74990 RING/U-box superfamily protein 0.55 0.31 -0.3
81 AT1G04100 indoleacetic acid-induced protein 10 indoleacetic acid-induced protein
10		 0.55 0.33 -0.32
82 AT2G34670 Protein of unknown function (DUF630 and DUF632) -0.55 0.31 -0.3
83 AT4G30030 Eukaryotic aspartyl protease family protein 0.55 0.32 -0.33
84 AT4G04530 transposable element gene -0.55 0.34 -0.31
85 AT5G04890 HSP20-like chaperones superfamily protein RESTRICTED TEV MOVEMENT 2 0.55 0.32 -0.32
86 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.3 -0.33
87 AT1G60980 gibberellin 20-oxidase 4 gibberellin 20-oxidase 4,
gibberellin 20-oxidase 4		 0.55 0.33 -0.3
88 AT4G20450 Leucine-rich repeat protein kinase family protein -0.54 0.3 -0.3
89 AT3G52130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.54 0.32 -0.32
90 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein -0.54 0.33 -0.33
91 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 -0.54 0.32 -0.34
92 AT3G60280 uclacyanin 3 uclacyanin 3 -0.54 0.32 -0.35
93 AT1G24240 Ribosomal protein L19 family protein -0.53 0.32 -0.32
94 AT1G04650 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.53 0.31 -0.3
95 AT2G05530 Glycine-rich protein family -0.53 0.29 -0.28
96 AT5G17800 myb domain protein 56 myb domain protein 56, myb domain
protein 56		 -0.53 0.3 -0.31
97 AT3G24630 unknown protein; Has 5348 Blast hits to 3182 proteins in
353 species: Archae - 0; Bacteria - 481; Metazoa - 1959;
Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes -
2313 (source: NCBI BLink).		 -0.53 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0264 Valine D,L-Valine L-Valine jasmonoyl-amino acid conjugates biosynthesis I,
pantothenate biosynthesis,
IAA degradation V,
valine degradation I,
valine biosynthesis,
tRNA charging,
indole-3-acetyl-amino acid biosynthesis 		0.56 0.3 -0.31 C0264