AT1G37150 : holocarboxylase synthetase 2
Query Information
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AGICode AT1G37150
Description holocarboxylase synthetase 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 1 0.28 -0.31
2 AT1G71900 Protein of unknown function (DUF803) -0.78 0.29 -0.3
3 AT3G48920 myb domain protein 45 myb domain protein 45, myb domain
protein 45		 0.73 0.33 -0.32
4 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 -0.71 0.31 -0.34
5 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 -0.71 0.29 -0.32
6 AT5G11010 Pre-mRNA cleavage complex II protein family -0.71 0.34 -0.32
7 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 0.7 0.31 -0.31
8 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 -0.7 0.31 -0.3
9 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.34 -0.31
10 AT4G35930 F-box family protein -0.7 0.31 -0.32
11 AT4G08420 transposable element gene -0.69 0.31 -0.31
12 AT3G25400 CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase
MazG-related, RS21-C6 (InterPro:IPR011394), EAR
(InterPro:IPR009039), NTP pyrophosphohydrolase MazG,
putative catalytic core (InterPro:IPR004518); Has 1123
Blast hits to 1121 proteins in 452 species: Archae - 22;
Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83;
Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).		 0.69 0.32 -0.3
13 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 -0.69 0.32 -0.34
14 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.68 0.32 -0.31
15 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.68 0.28 -0.31
16 AT2G19060 SGNH hydrolase-type esterase superfamily protein -0.67 0.31 -0.3
17 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 -0.67 0.32 -0.33
18 AT4G10370 Cysteine/Histidine-rich C1 domain family protein -0.67 0.32 -0.32
19 AT3G62330 Zinc knuckle (CCHC-type) family protein 0.66 0.32 -0.3
20 AT1G43570 transposable element gene 0.66 0.3 -0.33
21 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 0.66 0.32 -0.32
22 AT3G17900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 45
Blast hits to 44 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.66 0.32 -0.32
23 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 -0.66 0.32 -0.31
24 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 -0.65 0.34 -0.31
25 AT1G18700 DNAJ heat shock N-terminal domain-containing protein -0.65 0.32 -0.33
26 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.31
27 AT1G78040 Pollen Ole e 1 allergen and extensin family protein -0.65 0.31 -0.33
28 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 -0.65 0.33 -0.31
29 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 -0.65 0.32 -0.34
30 AT2G23110 Late embryogenesis abundant protein, group 6 0.65 0.31 -0.3
31 AT1G03350 BSD domain-containing protein -0.64 0.31 -0.31
32 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.64 0.31 -0.3
33 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.31 -0.33
34 AT1G52910 Protein of unknown function (DUF1218) -0.64 0.3 -0.31
35 AT5G49945 Protein of unknown function (DUF1682) -0.64 0.32 -0.32
36 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 -0.64 0.33 -0.33
37 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein 0.64 0.32 -0.32
38 AT3G05280 Integral membrane Yip1 family protein -0.64 0.3 -0.34
39 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.32
40 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 -0.63 0.32 -0.29
41 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 0.63 0.31 -0.31
42 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 -0.63 0.31 -0.31
43 AT1G69570 Dof-type zinc finger DNA-binding family protein -0.63 0.33 -0.33
44 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 -0.63 0.31 -0.32
45 AT1G21230 wall associated kinase 5 wall associated kinase 5 -0.63 0.31 -0.31
46 AT3G15040 Protein of unknown function, DUF584 -0.63 0.3 -0.31
47 AT1G24170 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE-LIKE 8,
LGT9		 -0.63 0.31 -0.32
48 AT3G56230 BTB/POZ domain-containing protein -0.62 0.32 -0.31
49 AT1G48900 Signal recognition particle, SRP54 subunit protein -0.62 0.29 -0.29
50 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 -0.62 0.32 -0.32
51 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 -0.62 0.29 -0.31
52 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 -0.62 0.31 -0.31
53 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.62 0.32 -0.34
54 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 -0.62 0.3 -0.29
55 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein -0.62 0.31 -0.29
56 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.28 -0.3
57 AT5G51160 Ankyrin repeat family protein 0.62 0.32 -0.33
58 AT5G01460 LMBR1-like membrane protein -0.62 0.31 -0.31
59 AT4G32950 Protein phosphatase 2C family protein -0.62 0.31 -0.32
60 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 -0.62 0.29 -0.31
61 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 -0.61 0.32 -0.3
62 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.31 -0.32
63 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 -0.61 0.3 -0.33
64 AT1G30540 Actin-like ATPase superfamily protein -0.61 0.31 -0.31
65 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 -0.61 0.32 -0.33
66 AT2G02800 protein kinase 2B protein kinase 2B, kinase 2 -0.61 0.31 -0.33
67 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 -0.61 0.32 -0.32
68 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.61 0.31 -0.3
69 AT5G18120 APR-like 7 APR-like 7, APR-like 7 -0.61 0.29 -0.34
70 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit -0.61 0.32 -0.31
71 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.32 -0.32
72 AT2G21880 RAB GTPase homolog 7A RAB GTPase homolog 7A, ARABIDOPSIS
RAB GTPASE HOMOLOG G2, RAB GTPase
homolog 7A		 -0.61 0.31 -0.3
73 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.61 0.3 -0.31
74 AT1G10720 BSD domain-containing protein -0.61 0.32 -0.33
75 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 -0.61 0.3 -0.29
76 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 0.61 0.3 -0.32
77 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 -0.6 0.32 -0.3
78 AT2G20210 RNI-like superfamily protein -0.6 0.32 -0.28
79 AT3G07470 Protein of unknown function, DUF538 -0.6 0.32 -0.32
80 AT3G01340 Transducin/WD40 repeat-like superfamily protein -0.6 0.32 -0.32
81 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.6 0.3 -0.31
82 AT3G06650 ATP-citrate lyase B-1 ATP-citrate lyase B-1 -0.6 0.32 -0.3
83 AT3G54690 Sugar isomerase (SIS) family protein SETH3 -0.6 0.33 -0.33
84 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.6 0.3 -0.31
85 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A -0.6 0.31 -0.32
86 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 -0.6 0.31 -0.33
87 AT3G51360 Eukaryotic aspartyl protease family protein 0.6 0.31 -0.31
88 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 -0.6 0.31 -0.34
89 AT2G06090 Plant self-incompatibility protein S1 family -0.6 0.32 -0.29
90 AT1G55200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.59 0.31 -0.34
91 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 -0.59 0.31 -0.3
92 AT5G45830 delay of germination 1 ATDOG1, DELAY OF GERMINATION 1,
GLUCOSE SENSING QTL 5		 -0.59 0.31 -0.3
93 AT1G06060 LisH and RanBPM domains containing protein -0.59 0.33 -0.3
94 AT3G10100 transposable element gene 0.59 0.29 -0.33
95 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein -0.59 0.31 -0.32
96 AT5G19810 Proline-rich extensin-like family protein -0.59 0.32 -0.31
97 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.59 0.33 -0.33
98 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 -0.59 0.3 -0.33
99 AT3G21600 Senescence/dehydration-associated protein-related -0.59 0.32 -0.3
100 AT4G29570 Cytidine/deoxycytidylate deaminase family protein -0.59 0.31 -0.33
101 AT3G07330 Cellulose-synthase-like C6 ATCSLC06, Cellulose-synthase-like
C6, CELLULOSE-SYNTHASE LIKE C6,
Cellulose-synthase-like C6		 -0.59 0.3 -0.32
102 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA -0.59 0.32 -0.31
103 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 -0.59 0.32 -0.3
104 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.59 0.31 -0.31
105 AT4G29610 Cytidine/deoxycytidylate deaminase family protein -0.59 0.31 -0.33
106 AT1G33900 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.3 -0.31
107 AT5G06700 Plant protein of unknown function (DUF828) TBR, TRICHOME BIREFRINGENCE -0.59 0.32 -0.31
108 AT2G21490 dehydrin LEA dehydrin LEA 0.58 0.31 -0.3
109 AT1G79330 metacaspase 5 AMC6, metacaspase 5, metacaspase
2b, metacaspase 5, metacaspase 2b		 0.58 0.3 -0.33
110 AT5G61310 Cytochrome c oxidase subunit Vc family protein 0.57 0.3 -0.34
111 AT5G05340 Peroxidase superfamily protein 0.57 0.29 -0.31
112 AT5G52390 PAR1 protein 0.56 0.31 -0.32
113 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 0.56 0.32 -0.31
114 AT2G19210 Leucine-rich repeat transmembrane protein kinase protein 0.56 0.31 -0.32
115 AT4G17585 Aluminium activated malate transporter family protein 0.55 0.31 -0.31
116 AT4G14465 AT-hook motif nuclear-localized protein 20 AT-hook motif nuclear-localized
protein 20		 0.55 0.31 -0.31
117 AT4G09360 NB-ARC domain-containing disease resistance protein 0.55 0.31 -0.32
118 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 0.54 0.3 -0.31
119 AT2G35920 RNA helicase family protein 0.54 0.35 -0.32
120 AT5G55900 Sucrase/ferredoxin-like family protein 0.53 0.32 -0.31
121 AT1G04330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.73 0.49 -0.5 C0199