AGICode | AT1G80020 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G80020 | transposable element gene | 1 | 0.32 | -0.3 | |||
2 | AT4G14615 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.32 | -0.32 | |||
3 | AT4G39170 | Sec14p-like phosphatidylinositol transfer family protein | 0.67 | 0.3 | -0.32 | |||
4 | AT1G64330 | myosin heavy chain-related | 0.66 | 0.31 | -0.31 | |||
5 | AT4G31880 | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink). |
0.66 | 0.32 | -0.3 | |||
6 | AT1G13560 | aminoalcoholphosphotransferase 1 | aminoalcoholphosphotransferase 1, ATAAPT1 |
0.65 | 0.31 | -0.32 | ||
7 | AT1G25490 | ARM repeat superfamily protein | ATB BETA BETA, ENHANCED ETHYLENE RESPONSE 1, ROOTS CURL IN NPA, REGA |
0.65 | 0.3 | -0.33 | ||
8 | AT1G02090 | Proteasome component (PCI) domain protein | ARABIDOPSIS THALIANA COP9 SIGNALOSOME SUBUNIT 7, CONSTITUTIVE PHOTOMORPHOGENIC 15, COP9 SIGNALOSOME SUBUNIT 7, FUSCA 5 |
0.65 | 0.32 | -0.33 | ||
9 | AT2G16940 | Splicing factor, CC1-like | 0.64 | 0.32 | -0.3 | |||
10 | AT4G29820 | homolog of CFIM-25 | ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25, homolog of CFIM-25 |
-0.63 | 0.32 | -0.33 | ||
11 | AT1G20720 | RAD3-like DNA-binding helicase protein | 0.63 | 0.32 | -0.29 | |||
12 | AT1G15280 | CASC3/Barentsz eIF4AIII binding | 0.63 | 0.32 | -0.32 | |||
13 | AT5G55000 | potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein |
FIP2 | -0.63 | 0.32 | -0.32 | ||
14 | AT3G13225 | WW domain-containing protein | 0.62 | 0.33 | -0.34 | |||
15 | AT4G21610 | lsd one like 2 | lsd one like 2 | -0.62 | 0.31 | -0.3 | ||
16 | AT5G01940 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein |
-0.62 | 0.33 | -0.32 | |||
17 | AT5G58490 | NAD(P)-binding Rossmann-fold superfamily protein | -0.61 | 0.29 | -0.3 | |||
18 | AT3G15610 | Transducin/WD40 repeat-like superfamily protein | -0.6 | 0.33 | -0.32 | |||
19 | AT5G03770 | KDO transferase A | AtKdtA, KDO transferase A | -0.6 | 0.3 | -0.32 | ||
20 | AT1G08130 | DNA ligase 1 | DNA ligase 1, DNA ligase 1 | 0.6 | 0.32 | -0.31 | ||
21 | AT1G27920 | microtubule-associated protein 65-8 | microtubule-associated protein 65-8 |
0.59 | 0.31 | -0.31 | ||
22 | AT3G61690 | nucleotidyltransferases | 0.59 | 0.31 | -0.32 | |||
23 | AT1G18150 | Protein kinase superfamily protein | ATMPK8, MPK8 | 0.59 | 0.33 | -0.32 | ||
24 | AT1G48320 | Thioesterase superfamily protein | -0.59 | 0.32 | -0.33 | |||
25 | AT4G31930 | Mitochondrial glycoprotein family protein | -0.59 | 0.34 | -0.31 | |||
26 | AT1G62050 | Ankyrin repeat family protein | 0.58 | 0.31 | -0.32 | |||
27 | AT5G55960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.57 | 0.32 | -0.32 | |||
28 | AT5G17030 | UDP-glucosyl transferase 78D3 | UDP-glucosyl transferase 78D3 | 0.57 | 0.31 | -0.29 | ||
29 | AT2G17870 | cold shock domain protein 3 | ARABIDOPSIS COLD SHOCK DOMAIN PROTEIN 3, cold shock domain protein 3 |
0.57 | 0.3 | -0.28 | ||
30 | AT1G53770 | O-fucosyltransferase family protein | -0.57 | 0.31 | -0.32 | |||
31 | AT5G63110 | histone deacetylase 6 | HISTONE DEACETYLASE 6, AXE1, histone deacetylase 6, RPD3B, RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1, SIL1 |
0.57 | 0.31 | -0.3 | ||
32 | AT2G25570 | binding | -0.56 | 0.29 | -0.33 | |||
33 | AT3G61540 | alpha/beta-Hydrolases superfamily protein | -0.55 | 0.31 | -0.32 | |||
34 | AT2G35320 | EYES ABSENT homolog | EYES ABSENT homolog, EYES ABSENT homolog |
-0.55 | 0.31 | -0.32 | ||
35 | AT4G38380 | MATE efflux family protein | 0.55 | 0.31 | -0.28 | |||
36 | AT1G32310 | unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.29 | -0.3 | |||
37 | AT4G36440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.29 | |||
38 | AT3G14800 | transposable element gene | 0.54 | 0.3 | -0.31 | |||
39 | AT2G18760 | chromatin remodeling 8 | chromatin remodeling 8 | 0.54 | 0.31 | -0.3 | ||
40 | AT3G57320 | unknown protein; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.3 | -0.32 | |||
41 | AT1G20350 | translocase inner membrane subunit 17-1 | translocase inner membrane subunit 17-1, translocase inner membrane subunit 17-1 |
-0.53 | 0.33 | -0.33 | ||
42 | AT2G42780 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
-0.53 | 0.33 | -0.31 | |||
43 | AT5G02770 | unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). |
modifier of snc1, 11 | 0.53 | 0.31 | -0.32 | ||
44 | AT3G14960 | Galactosyltransferase family protein | -0.53 | 0.33 | -0.32 | |||
45 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.52 | 0.34 | -0.3 | |||
46 | AT2G35795 | Chaperone DnaJ-domain superfamily protein | -0.52 | 0.32 | -0.32 | |||
47 | AT4G08290 | nodulin MtN21 /EamA-like transporter family protein | -0.52 | 0.31 | -0.29 | |||
48 | AT4G28830 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.52 | 0.31 | -0.3 | |||
49 | AT5G58100 | unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.51 | 0.31 | -0.34 | |||
50 | AT4G36690 | U2 snRNP auxilliary factor, large subunit, splicing factor | ATU2AF65A | 0.51 | 0.34 | -0.36 | ||
51 | AT1G56200 | embryo defective 1303 | embryo defective 1303 | -0.51 | 0.32 | -0.31 | ||
52 | AT3G11930 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.51 | 0.32 | -0.32 | |||
53 | AT4G02490 | transposable element gene | -0.5 | 0.32 | -0.33 | |||
54 | AT1G06070 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.5 | 0.33 | -0.34 | |||
55 | AT1G24210 | Paired amphipathic helix (PAH2) superfamily protein | -0.5 | 0.32 | -0.29 | |||
56 | AT4G08220 | transposable element gene | -0.5 | 0.33 | -0.32 | |||
57 | AT2G07230 | transposable element gene | -0.5 | 0.31 | -0.32 | |||
58 | AT4G33640 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.5 | 0.3 | -0.31 | |||
59 | AT4G16840 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.5 | 0.34 | -0.32 | |||
60 | AT2G17030 | F-box family protein with a domain of unknown function (DUF295) |
-0.5 | 0.33 | -0.32 | |||
61 | AT3G55060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
62 | AT5G55810 | nicotinate/nicotinamide mononucleotide adenyltransferase | nicotinate/nicotinamide mononucleotide adenyltransferase, nicotinate/nicotinamide mononucleotide adenyltransferase |
-0.5 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
63 | C0212 | PR_MST_2336.8 | - | - | - | 0.56 | 0.42 | -0.46 |