AGICode | AT1G59560 |
Description | E3 Ubiquitin ligase family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G59560 | E3 Ubiquitin ligase family protein | DIAP1-like protein 2, ZCF61 | 1 | 0.33 | -0.33 | ||
2 | AT5G01650 | Tautomerase/MIF superfamily protein | 0.82 | 0.3 | -0.31 | |||
3 | AT5G47630 | mitochondrial acyl carrier protein 3 | mitochondrial acyl carrier protein 3 |
0.79 | 0.32 | -0.31 | ||
4 | AT1G10050 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
-0.78 | 0.32 | -0.33 | |||
5 | AT5G24165 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.77 | 0.32 | -0.31 | |||
6 | AT5G09960 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.76 | 0.3 | -0.31 | |||
7 | AT4G09550 | AtGCP3 interacting protein 1 | ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1, AtGCP3 interacting protein 1 |
0.75 | 0.33 | -0.32 | ||
8 | AT5G25080 | Sas10/Utp3/C1D family | 0.75 | 0.33 | -0.32 | |||
9 | AT3G48425 | DNAse I-like superfamily protein | 0.73 | 0.32 | -0.3 | |||
10 | AT5G53940 | Yippee family putative zinc-binding protein | 0.73 | 0.32 | -0.32 | |||
11 | AT5G16870 | Peptidyl-tRNA hydrolase II (PTH2) family protein | 0.73 | 0.3 | -0.3 | |||
12 | AT5G62980 | Dihydroneopterin aldolase | FOLB2 | 0.73 | 0.31 | -0.32 | ||
13 | AT1G07880 | Protein kinase superfamily protein | ATMPK13 | 0.72 | 0.31 | -0.32 | ||
14 | AT1G21480 | Exostosin family protein | 0.72 | 0.32 | -0.3 | |||
15 | AT5G42580 | cytochrome P450, family 705, subfamily A, polypeptide 12 | cytochrome P450, family 705, subfamily A, polypeptide 12 |
-0.72 | 0.3 | -0.31 | ||
16 | AT3G14080 | Small nuclear ribonucleoprotein family protein | 0.72 | 0.32 | -0.34 | |||
17 | AT1G10230 | SKP1-like 18 | SKP1-like 18, SKP1-like 18 | 0.72 | 0.29 | -0.31 | ||
18 | AT1G60010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.71 | 0.32 | -0.32 | |||
19 | AT2G11520 | calmodulin-binding receptor-like cytoplasmic kinase 3 | calmodulin-binding receptor-like cytoplasmic kinase 3 |
-0.7 | 0.32 | -0.31 | ||
20 | AT5G23550 | Got1/Sft2-like vescicle transport protein family | 0.7 | 0.33 | -0.3 | |||
21 | AT1G24460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). |
TGN-localized SYP41 interacting protein |
-0.69 | 0.32 | -0.31 | ||
22 | AT3G25040 | endoplasmic reticulum retention defective 2B | endoplasmic reticulum retention defective 2B |
0.69 | 0.32 | -0.31 | ||
23 | AT1G49980 | DNA/RNA polymerases superfamily protein | 0.69 | 0.32 | -0.33 | |||
24 | AT2G15280 | Reticulon family protein | 0.68 | 0.31 | -0.31 | |||
25 | AT5G44200 | CAP-binding protein 20 | ATCBP20, CAP-binding protein 20 | 0.68 | 0.35 | -0.31 | ||
26 | AT4G10280 | RmlC-like cupins superfamily protein | 0.68 | 0.3 | -0.34 | |||
27 | AT5G40710 | zinc finger (C2H2 type) family protein | 0.68 | 0.3 | -0.31 | |||
28 | AT1G26450 | Carbohydrate-binding X8 domain superfamily protein | -0.67 | 0.33 | -0.3 | |||
29 | AT5G42590 | cytochrome P450, family 71, subfamily A, polypeptide 16 | cytochrome P450, family 71, subfamily A, polypeptide 16, marneral oxidase |
-0.67 | 0.32 | -0.31 | ||
30 | AT5G52430 | hydroxyproline-rich glycoprotein family protein | -0.67 | 0.32 | -0.3 | |||
31 | AT2G01880 | purple acid phosphatase 7 | PURPLE ACID PHOSPHATASE 7, purple acid phosphatase 7 |
-0.66 | 0.32 | -0.3 | ||
32 | AT1G10480 | zinc finger protein 5 | zinc finger protein 5 | -0.65 | 0.31 | -0.32 | ||
33 | AT5G22910 | cation/H+ exchanger 9 | ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 9, cation/H+ exchanger 9 |
-0.65 | 0.31 | -0.33 | ||
34 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.65 | 0.33 | -0.31 | |||
35 | AT5G65240 | Leucine-rich repeat protein kinase family protein | -0.65 | 0.32 | -0.32 | |||
36 | AT3G06540 | Rab escort protein | AthREP, Rab escort protein | -0.65 | 0.33 | -0.33 | ||
37 | AT5G09400 | K+ uptake permease 7 | K+ uptake permease 7 | -0.63 | 0.31 | -0.31 | ||
38 | AT1G72140 | Major facilitator superfamily protein | -0.63 | 0.3 | -0.32 | |||
39 | AT3G27810 | myb domain protein 21 | myb domain protein 21, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 |
-0.62 | 0.31 | -0.3 | ||
40 | AT1G20120 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.62 | 0.31 | -0.28 | |||
41 | AT1G59820 | aminophospholipid ATPase 3 | aminophospholipid ATPase 3 | -0.62 | 0.31 | -0.32 | ||
42 | AT3G60860 | SEC7-like guanine nucleotide exchange family protein | -0.62 | 0.34 | -0.31 | |||
43 | AT3G12660 | FASCICLIN-like arabinogalactan protein 14 precursor | FASCICLIN-like arabinogalactan protein 14 precursor |
-0.61 | 0.3 | -0.3 | ||
44 | AT2G27390 | proline-rich family protein | -0.61 | 0.32 | -0.31 | |||
45 | AT2G39300 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast hits to 28308 proteins in 1743 species: Archae - 734; Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants - 2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI BLink). |
-0.61 | 0.33 | -0.31 | |||
46 | AT5G50900 | ARM repeat superfamily protein | -0.61 | 0.3 | -0.32 | |||
47 | AT5G04120 | Phosphoglycerate mutase family protein | -0.6 | 0.29 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
48 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.71 | 0.32 | -0.32 |