AT1G56030 : -
Query Information
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AGICode AT1G56030
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56030 RING/U-box superfamily protein 1 0.33 -0.34
2 AT3G16550 DEGP protease 12 DEGP protease 12 -0.66 0.33 -0.29
3 AT3G11350 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.3
4 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 -0.65 0.32 -0.3
5 AT1G61430 S-locus lectin protein kinase family protein -0.64 0.31 -0.31
6 AT1G11920 Pectin lyase-like superfamily protein -0.64 0.29 -0.32
7 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.63 0.33 -0.34
8 AT5G57520 zinc finger protein 2 ZINC FINGER PROTEIN 2, zinc finger
protein 2		 -0.63 0.33 -0.33
9 AT3G50990 Peroxidase superfamily protein -0.62 0.31 -0.31
10 AT2G33420 Protein of unknown function (DUF810) -0.62 0.33 -0.3
11 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 0.61 0.31 -0.31
12 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 0.61 0.31 -0.3
13 AT1G61460 S-locus protein kinase, putative -0.61 0.32 -0.31
14 AT4G09290 transposable element gene -0.6 0.31 -0.31
15 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.6 0.31 -0.31
16 AT5G09490 Ribosomal protein S19 family protein -0.6 0.32 -0.3
17 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.33 -0.32
18 AT1G31960 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.32 -0.31
19 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.31 -0.31
20 AT1G28430 cytochrome P450, family 705, subfamily A, polypeptide 24 cytochrome P450, family 705,
subfamily A, polypeptide 24		 -0.59 0.32 -0.32
21 AT3G25050 xyloglucan endotransglucosylase/hydrolase 3 xyloglucan
endotransglucosylase/hydrolase 3		 0.59 0.32 -0.31
22 AT3G15390 silencing defective 5 silencing defective 5 0.59 0.3 -0.32
23 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS 0.59 0.32 -0.32
24 AT5G40680 Galactose oxidase/kelch repeat superfamily protein -0.59 0.3 -0.33
25 AT3G03360 F-box/RNI-like superfamily protein 0.59 0.29 -0.3
26 AT1G46696 Protein of unknown function, DUF601 -0.59 0.33 -0.31
27 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.58 0.31 -0.34
28 AT4G02690 Bax inhibitor-1 family protein -0.58 0.31 -0.31
29 AT1G23240 Caleosin-related family protein -0.58 0.32 -0.33
30 AT3G29775 transposable element gene -0.57 0.3 -0.31
31 AT2G34890 CTP synthase family protein -0.57 0.31 -0.3
32 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.57 0.32 -0.32
33 AT3G43970 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF295)
(TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.32
34 AT1G27520 Glycosyl hydrolase family 47 protein 0.57 0.31 -0.3
35 AT5G18810 SC35-like splicing factor 28 SC35-like splicing factor 28,
SC35-like splicing factor 28		 0.56 0.31 -0.32
36 AT3G15620 DNA photolyase family protein UV REPAIR DEFECTIVE 3 0.56 0.3 -0.31
37 AT3G23260 F-box and associated interaction domains-containing protein -0.56 0.3 -0.3
38 AT2G13950 Cysteine/Histidine-rich C1 domain family protein 0.56 0.32 -0.31
39 AT1G23680 Domain of unknown function (DUF220) 0.55 0.29 -0.31
40 AT3G03660 WUSCHEL related homeobox 11 WUSCHEL related homeobox 11 -0.55 0.33 -0.34
41 AT4G40070 RING/U-box superfamily protein -0.55 0.33 -0.33
42 AT2G37000 TCP family transcription factor 0.55 0.33 -0.33
43 AT2G22600 RNA-binding KH domain-containing protein -0.55 0.31 -0.29
44 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein 0.55 0.33 -0.29
45 AT4G14610 pseudogene, disease resistance protein (CC-NBS-LRR class),
putative, domain signature CC-NBS-LRR exists, suggestive of
a disease resistance protein.; blastp match of 45% identity
and 2.2e-162 P-value to
GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type
disease resistance protein {Poncirus trifoliata}		 0.55 0.3 -0.31
46 AT5G46320 MADS-box family protein 0.55 0.32 -0.32
47 AT1G43840 transposable element gene -0.55 0.31 -0.32
48 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.31 -0.31
49 AT2G06950 transposable element gene -0.54 0.34 -0.31
50 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.34 -0.3
51 AT5G24140 squalene monooxygenase 2 squalene monooxygenase 2 -0.54 0.31 -0.31
52 AT1G27190 Leucine-rich repeat protein kinase family protein -0.54 0.32 -0.31
53 AT3G57250 Emsy N Terminus (ENT) domain-containing protein -0.54 0.32 -0.29
54 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 -0.53 0.29 -0.3
55 AT5G46150 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 0.53 0.31 -0.32
56 AT5G55900 Sucrase/ferredoxin-like family protein 0.52 0.33 -0.33
57 AT2G15600 transposable element gene 0.52 0.32 -0.3
58 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.3
59 AT1G34240 transposable element gene 0.52 0.31 -0.32
60 AT3G58290 TRAF-like superfamily protein 0.52 0.31 -0.35
61 AT3G30840 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.3 -0.33
62 AT5G17970 Disease resistance protein (TIR-NBS-LRR class) family 0.52 0.32 -0.3
63 AT5G60110 pumilio 18 pumilio 18, pumilio 18 -0.52 0.32 -0.3
64 AT3G26040 HXXXD-type acyl-transferase family protein -0.52 0.31 -0.32
65 AT2G01890 purple acid phosphatase 8 PURPLE ACID PHOSPHATASE 8, purple
acid phosphatase 8		 -0.52 0.37 -0.32
66 AT1G17310 MADS-box transcription factor family protein -0.51 0.34 -0.3
67 AT2G11110 transposable element gene 0.51 0.31 -0.3
68 AT2G40530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, inflorescence
meristem, petal, flower; EXPRESSED DURING: 4 anthesis,
petal differentiation and expansion stage; Has 5 Blast hits
to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.32 -0.32
69 AT3G02980 MEIOTIC CONTROL OF CROSSOVERS1 MEIOTIC CONTROL OF CROSSOVERS1 0.51 0.32 -0.33
70 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A 0.51 0.31 -0.32
71 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 -0.51 0.33 -0.31
72 AT3G42830 RING/U-box superfamily protein 0.51 0.32 -0.33
73 AT4G22100 beta glucosidase 2 beta glucosidase 2 -0.51 0.3 -0.3
74 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.51 0.31 -0.31
75 AT2G38100 proton-dependent oligopeptide transport (POT) family
protein		 -0.5 0.31 -0.31
76 AT2G31470 F-box and associated interaction domains-containing protein DROUGHT TOLERANCE REPRESSOR 0.5 0.3 -0.34
77 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 0.5 0.32 -0.31
78 AT2G06180 transposable element gene 0.5 0.32 -0.33
79 AT1G51520 RNA-binding (RRM/RBD/RNP motifs) family protein 0.5 0.31 -0.28
80 AT1G51000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51020.1); Has 19 Blast hits
to 16 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.31 -0.31
81 AT1G43950 auxin response factor 23 auxin response factor 23 -0.5 0.32 -0.32
82 AT3G04150 RmlC-like cupins superfamily protein -0.5 0.32 -0.31
83 AT5G61120 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.5 0.31 -0.31
84 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.5 0.31 -0.33
85 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.5 0.3 -0.3
86 AT1G18030 Protein phosphatase 2C family protein 0.5 0.3 -0.29
87 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 0.5 0.31 -0.32
88 AT2G05960 transposable element gene -0.49 0.31 -0.3
89 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 0.49 0.3 -0.34
90 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.49 0.34 -0.31
91 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein 0.49 0.3 -0.32
92 AT3G18720 F-box family protein -0.49 0.3 -0.3
93 AT1G67070 Mannose-6-phosphate isomerase, type I DARK INDUCIBLE 9, PHOSPHOMANNOSE
ISOMERASE 2		 -0.49 0.32 -0.33
94 AT1G02490 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.49 0.32 -0.32
95 AT3G58790 galacturonosyltransferase 15 galacturonosyltransferase 15 -0.49 0.31 -0.29
96 AT2G16840 transposable element gene 0.48 0.31 -0.32
97 AT3G29791 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.32 -0.34
98 AT5G07230 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.48 0.31 -0.33
99 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2		 0.48 0.32 -0.31
100 AT1G01480 1-amino-cyclopropane-1-carboxylate synthase 2 1-amino-cyclopropane-1-carboxylate
synthase 2, AT-ACC2		 0.48 0.3 -0.34
101 AT3G60470 Plant protein of unknown function (DUF247) 0.48 0.35 -0.32
102 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.47 0.32 -0.3
103 AT1G11880 transferases, transferring hexosyl groups 0.47 0.31 -0.32
104 AT5G53810 O-methyltransferase family protein 0.47 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.69 0.49 -0.51 C0247
106 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.66 0.46 -0.51 C0085
107 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		0.6 0.44 -0.48 C0108
108 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.53 0.32 -0.34
109 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.53 0.32 -0.35
110 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.53 0.33 -0.34 C0246
111 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.52 0.32 -0.3
112 C0206 Phosphatidylglycerol-34:4 - Phosphatidylglycerol-34:4 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.51 0.36 -0.34
113 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.49 0.34 -0.34
114 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.49 0.31 -0.33
115 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.49 0.34 -0.33