AT1G56090 : -
Query Information
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AGICode AT1G56090
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.32 -0.31
2 AT3G53940 Mitochondrial substrate carrier family protein -0.84 0.32 -0.33
3 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.81 0.31 -0.3
4 AT5G58740 HSP20-like chaperones superfamily protein 0.81 0.31 -0.33
5 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.8 0.32 -0.33
6 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.3 -0.34
7 AT5G06370 NC domain-containing protein-related 0.78 0.33 -0.3
8 AT5G05230 RING/U-box superfamily protein 0.77 0.31 -0.33
9 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF -0.77 0.3 -0.32
10 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.77 0.33 -0.31
11 AT1G03610 Protein of unknown function (DUF789) 0.77 0.32 -0.3
12 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative -0.76 0.31 -0.32
13 AT3G10690 DNA GYRASE A DNA GYRASE A -0.76 0.31 -0.29
14 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.76 0.32 -0.33
15 AT4G01610 Cysteine proteinases superfamily protein 0.76 0.31 -0.29
16 AT5G16120 alpha/beta-Hydrolases superfamily protein 0.76 0.32 -0.33
17 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 0.76 0.34 -0.31
18 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 0.75 0.33 -0.29
19 AT1G50600 scarecrow-like 5 scarecrow-like 5 0.75 0.32 -0.34
20 AT5G08139 RING/U-box superfamily protein 0.75 0.32 -0.3
21 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.75 0.31 -0.31
22 AT3G23940 dehydratase family -0.74 0.31 -0.35
23 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 -0.74 0.31 -0.29
24 AT3G47160 RING/U-box superfamily protein 0.74 0.3 -0.29
25 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.32 -0.29
26 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 0.74 0.31 -0.31
27 AT2G19350 Eukaryotic protein of unknown function (DUF872) 0.74 0.34 -0.29
28 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 -0.74 0.33 -0.33
29 AT5G21090 Leucine-rich repeat (LRR) family protein 0.74 0.31 -0.29
30 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B 0.74 0.31 -0.31
31 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.74 0.32 -0.33
32 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 0.73 0.33 -0.31
33 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.73 0.31 -0.31
34 AT4G37180 Homeodomain-like superfamily protein 0.73 0.33 -0.3
35 AT1G06630 F-box/RNI-like superfamily protein 0.73 0.32 -0.31
36 AT1G52360 Coatomer, beta' subunit -0.73 0.31 -0.32
37 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.73 0.33 -0.31
38 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B -0.72 0.3 -0.33
39 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.72 0.32 -0.32
40 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.32 -0.32
41 AT4G23950 Galactose-binding protein -0.72 0.3 -0.32
42 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.72 0.31 -0.32
43 AT3G11100 sequence-specific DNA binding transcription factors 0.71 0.3 -0.31
44 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.3 -0.31
45 AT2G43330 inositol transporter 1 INOSITOL TRANSPORTER 1, inositol
transporter 1		 0.71 0.32 -0.33
46 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 0.71 0.33 -0.31
47 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE -0.71 0.29 -0.31
48 AT2G04160 Subtilisin-like serine endopeptidase family protein AUXIN-INDUCED IN ROOT CULTURES 3 0.7 0.31 -0.3
49 AT5G27330 Prefoldin chaperone subunit family protein -0.7 0.31 -0.33
50 AT2G41940 zinc finger protein 8 zinc finger protein 8 -0.7 0.3 -0.29
51 AT2G39040 Peroxidase superfamily protein -0.7 0.33 -0.31
52 AT3G01400 ARM repeat superfamily protein 0.7 0.3 -0.32
53 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.35 -0.32
54 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 -0.7 0.32 -0.3
55 AT3G06780 glycine-rich protein 0.7 0.32 -0.3
56 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 0.7 0.31 -0.34
57 AT4G29420 F-box/RNI-like superfamily protein 0.7 0.31 -0.31
58 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.3 -0.29
59 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.7 0.3 -0.31
60 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.29 -0.33
61 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 0.69 0.34 -0.32
62 AT4G19860 alpha/beta-Hydrolases superfamily protein 0.69 0.31 -0.32
63 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.34 -0.34
64 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 -0.69 0.32 -0.34
65 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.69 0.31 -0.31
66 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.33 -0.32
67 AT2G18220 Noc2p family -0.69 0.3 -0.3
68 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 -0.69 0.3 -0.32
69 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 -0.69 0.33 -0.33
70 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.32 -0.32
71 AT1G02820 Late embryogenesis abundant 3 (LEA3) family protein -0.69 0.32 -0.32
72 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 -0.69 0.33 -0.3
73 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 0.69 0.28 -0.31
74 AT4G15890 binding -0.69 0.29 -0.34
75 AT3G25910 Protein of unknown function (DUF1644) 0.69 0.32 -0.3
76 AT4G30840 Transducin/WD40 repeat-like superfamily protein -0.69 0.29 -0.3
77 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.69 0.33 -0.3
78 AT5G66050 Wound-responsive family protein 0.69 0.32 -0.31
79 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.68 0.32 -0.32
80 AT5G50230 Transducin/WD40 repeat-like superfamily protein 0.68 0.3 -0.31
81 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.31 -0.33
82 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.68 0.33 -0.31
83 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.68 0.3 -0.31
84 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.68 0.32 -0.31
85 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.68 0.3 -0.33
86 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 0.68 0.31 -0.3
87 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.68 0.31 -0.33
88 AT1G09660 RNA-binding KH domain-containing protein -0.67 0.33 -0.32
89 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.33 -0.32
90 AT1G19940 glycosyl hydrolase 9B5 glycosyl hydrolase 9B5, glycosyl
hydrolase 9B5		 -0.67 0.33 -0.3
91 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.67 0.3 -0.3
92 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.67 0.31 -0.32
93 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 -0.67 0.3 -0.34
94 AT1G01550 Protein of unknown function (DUF793) BYPASS 1 0.67 0.32 -0.32
95 AT4G05610 transposable element gene -0.67 0.33 -0.3
96 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.67 0.31 -0.33
97 AT3G47510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.31 -0.32
98 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.67 0.32 -0.32
99 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.29 -0.29
100 AT5G59850 Ribosomal protein S8 family protein -0.67 0.32 -0.31
101 AT4G38390 root hair specific 17 root hair specific 17 -0.67 0.32 -0.32
102 AT5G39960 GTP binding;GTP binding -0.67 0.31 -0.31
103 AT4G14650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 6 plant structures; EXPRESSED DURING: petal
differentiation and expansion stage; Has 2407 Blast hits to
1833 proteins in 310 species: Archae - 19; Bacteria - 223;
Metazoa - 708; Fungi - 285; Plants - 140; Viruses - 42;
Other Eukaryotes - 990 (source: NCBI BLink).		 -0.67 0.32 -0.31
104 AT3G12120 fatty acid desaturase 2 fatty acid desaturase 2 0.67 0.3 -0.34
105 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
106 AT1G76120 Pseudouridine synthase family protein -0.66 0.32 -0.35
107 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 0.66 0.29 -0.34
108 AT5G14390 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.3
109 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 -0.66 0.32 -0.33
110 AT1G13880 ELM2 domain-containing protein 0.66 0.31 -0.34
111 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 -0.66 0.31 -0.3
112 AT2G46260 BTB/POZ/Kelch-associated protein 0.66 0.3 -0.29
113 AT5G19860 Protein of unknown function, DUF538 0.66 0.32 -0.33
114 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.66 0.32 -0.33
115 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 -0.66 0.31 -0.31
116 AT2G26210 Ankyrin repeat family protein 0.65 0.32 -0.33
117 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.65 0.29 -0.33
118 AT5G44850 Protein with RNI-like/FBD-like domains -0.65 0.31 -0.3
119 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.65 0.33 -0.3
120 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.31 -0.32
121 AT1G72760 Protein kinase superfamily protein 0.65 0.33 -0.33
122 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.34
123 AT3G50980 dehydrin xero 1 dehydrin xero 1 0.65 0.33 -0.3
124 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.31
125 AT4G13060 F-box associated ubiquitination effector family protein -0.65 0.32 -0.32
126 AT3G19280 fucosyltransferase 11 ATFUT11, FUCT1, FUCTA,
fucosyltransferase 11		 0.65 0.32 -0.32
127 AT2G17900 SET domain group 37 ASH1-related 1, SET domain group
37		 -0.65 0.31 -0.31
128 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.65 0.3 -0.31
129 AT5G51720 2 iron, 2 sulfur cluster binding -0.65 0.32 -0.31
130 AT3G22480 prefoldin 2 prefoldin 2 -0.65 0.32 -0.31
131 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.65 0.31 -0.34
132 AT4G15290 Cellulose synthase family protein ATCSLB05, CELLULOSE SYNTHASE LIKE
5, CSLB05		 -0.65 0.34 -0.3
133 AT2G14630 transposable element gene -0.65 0.3 -0.32
134 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c 0.65 0.3 -0.33
135 AT2G14020 transposable element gene -0.65 0.31 -0.32
136 AT2G25355 PNAS-3 related -0.65 0.3 -0.31
137 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.65 0.32 -0.33
138 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.65 0.32 -0.31
139 AT3G61530 Phosphoenolpyruvate carboxylase family protein PANB2 0.65 0.32 -0.33
140 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 -0.65 0.32 -0.31
141 AT3G11964 RNA binding;RNA binding -0.65 0.3 -0.3
142 AT2G18330 AAA-type ATPase family protein -0.64 0.31 -0.31
143 AT4G38780 Pre-mRNA-processing-splicing factor -0.64 0.34 -0.31
144 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.64 0.32 -0.32
145 AT3G27230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.31 -0.32
146 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.3 -0.33
147 AT2G19380 RNA recognition motif (RRM)-containing protein -0.64 0.33 -0.32
148 AT1G16940 F-box/RNI-like/FBD-like domains-containing protein -0.64 0.31 -0.32
149 AT1G01050 pyrophosphorylase 1 pyrophosphorylase 1,
pyrophosphorylase 1		 -0.64 0.33 -0.32
150 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 -0.64 0.32 -0.31