AT1G02840 : Serine/Arginine-Rich Protein Splicing Factor 34.....
Query Information
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AGICode AT1G02840
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 1 0.28 -0.32
2 AT1G25260 Ribosomal protein L10 family protein 0.82 0.31 -0.33
3 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 0.79 0.3 -0.32
4 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.32 -0.31
5 AT5G23810 amino acid permease 7 amino acid permease 7 -0.75 0.29 -0.32
6 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.73 0.29 -0.32
7 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.72 0.33 -0.31
8 AT2G16940 Splicing factor, CC1-like 0.71 0.3 -0.34
9 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.29 -0.31
10 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.7 0.32 -0.29
11 AT3G28050 nodulin MtN21 /EamA-like transporter family protein -0.69 0.32 -0.35
12 AT2G36930 zinc finger (C2H2 type) family protein 0.69 0.31 -0.31
13 AT5G17930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.69 0.32 -0.32
14 AT5G27350 Major facilitator superfamily protein SFP1 -0.69 0.31 -0.29
15 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.68 0.31 -0.32
16 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.3
17 AT4G28710 Myosin family protein with Dil domain MYOSIN XI H, XIH -0.68 0.29 -0.3
18 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.68 0.33 -0.31
19 AT5G46160 Ribosomal protein L14p/L23e family protein 0.68 0.32 -0.31
20 AT3G19120 PIF / Ping-Pong family of plant transposases 0.67 0.33 -0.32
21 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.67 0.3 -0.31
22 AT1G78620 Protein of unknown function DUF92, transmembrane -0.67 0.32 -0.32
23 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics 0.67 0.35 -0.34
24 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.67 0.31 -0.32
25 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.67 0.3 -0.31
26 AT3G22550 Protein of unknown function (DUF581) -0.67 0.31 -0.33
27 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.67 0.31 -0.31
28 AT1G47670 Transmembrane amino acid transporter family protein 0.67 0.32 -0.31
29 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.66 0.31 -0.29
30 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 0.66 0.3 -0.31
31 AT4G03960 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP4, plant and fungi
atypical dual-specificity
phosphatase 4		 -0.66 0.32 -0.3
32 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.66 0.32 -0.32
33 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.66 0.31 -0.32
34 AT2G36290 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.31
35 AT1G16730 unknown protein 6 unknown protein 6 -0.66 0.32 -0.32
36 AT2G17220 Protein kinase superfamily protein kinase 3 -0.66 0.32 -0.32
37 AT5G51050 Mitochondrial substrate carrier family protein ATP/phosphate carrier 2 -0.66 0.32 -0.31
38 AT5G55810 nicotinate/nicotinamide mononucleotide adenyltransferase nicotinate/nicotinamide
mononucleotide adenyltransferase,
nicotinate/nicotinamide
mononucleotide adenyltransferase		 -0.66 0.31 -0.33
39 AT3G01360 Family of unknown function (DUF716) -0.65 0.31 -0.33
40 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 0.65 0.31 -0.33
41 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 0.65 0.32 -0.33
42 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 0.65 0.33 -0.32
43 AT1G80190 partner of SLD five 1 partner of SLD five 1 0.65 0.32 -0.3
44 AT2G42490 Copper amine oxidase family protein -0.65 0.32 -0.3
45 AT1G32190 alpha/beta-Hydrolases superfamily protein 0.64 0.33 -0.32
46 AT3G28940 AIG2-like (avirulence induced gene) family protein -0.64 0.33 -0.32
47 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.64 0.33 -0.3
48 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.64 0.32 -0.32
49 AT2G01680 Ankyrin repeat family protein -0.64 0.31 -0.3
50 AT1G60560 SWIM zinc finger family protein 0.64 0.32 -0.34
51 AT1G77250 RING/FYVE/PHD-type zinc finger family protein 0.64 0.31 -0.31
52 AT5G23430 Transducin/WD40 repeat-like superfamily protein 0.64 0.31 -0.29
53 AT5G55760 sirtuin 1 sirtuin 1 0.64 0.31 -0.31
54 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 -0.63 0.31 -0.33
55 AT5G53820 Late embryogenesis abundant protein (LEA) family protein -0.63 0.33 -0.34
56 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.63 0.32 -0.33
57 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS 0.63 0.31 -0.31
58 AT4G27350 Protein of unknown function (DUF1223) 0.63 0.33 -0.33
59 AT2G29980 fatty acid desaturase 3 AtFAD3, fatty acid desaturase 3 0.63 0.33 -0.31
60 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.63 0.3 -0.31
61 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 -0.63 0.3 -0.3
62 AT1G66350 RGA-like 1 RGL, RGA-like 1 -0.62 0.34 -0.3
63 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.62 0.34 -0.32
64 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.3
65 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 -0.62 0.33 -0.31
66 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.61 0.31 -0.31
67 AT1G68440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits
to 86 proteins in 29 species: Archae - 0; Bacteria - 6;
Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 -0.61 0.33 -0.34
68 AT2G44460 beta glucosidase 28 beta glucosidase 28 -0.61 0.33 -0.33
69 AT3G17790 purple acid phosphatase 17 ATACP5, ATPAP17, purple acid
phosphatase 17		 -0.61 0.32 -0.31
70 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 -0.61 0.32 -0.31
71 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.61 0.32 -0.31
72 AT5G67580 Homeodomain-like/winged-helix DNA-binding family protein ATTBP3, TELOMERE REPEAT BINDING
FACTOR 2, TELOMERE-BINDING PROTEIN
3, TRB2		 -0.6 0.31 -0.32
73 AT1G28320 protease-related DEG15 -0.6 0.33 -0.31
74 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 -0.6 0.31 -0.31
75 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.59 0.33 -0.3
76 AT2G26660 SPX domain gene 2 ARABIDOPSIS THALIANA SPX DOMAIN
GENE 2, SPX domain gene 2		 -0.59 0.32 -0.33
77 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 -0.59 0.33 -0.34
78 AT2G44760 Domain of unknown function (DUF3598) -0.59 0.33 -0.3
79 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 -0.59 0.32 -0.31
80 AT4G31330 Protein of unknown function, DUF599 -0.59 0.3 -0.33
81 AT4G35220 Cyclase family protein -0.58 0.29 -0.33