AT1G02780 : embryo defective 2386
Query Information
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AGICode AT1G02780
Description Ribosomal protein L19e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 1 0.34 -0.33
2 AT3G09200 Ribosomal protein L10 family protein 0.94 0.3 -0.32
3 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.93 0.33 -0.31
4 AT1G67430 Ribosomal protein L22p/L17e family protein 0.92 0.29 -0.34
5 AT5G57290 60S acidic ribosomal protein family 0.92 0.31 -0.31
6 AT3G47370 Ribosomal protein S10p/S20e family protein 0.92 0.32 -0.33
7 AT5G27770 Ribosomal L22e protein family 0.92 0.31 -0.31
8 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.91 0.32 -0.32
9 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.91 0.32 -0.31
10 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.91 0.33 -0.32
11 AT2G19730 Ribosomal L28e protein family 0.91 0.33 -0.32
12 AT2G44120 Ribosomal protein L30/L7 family protein 0.9 0.33 -0.31
13 AT1G04480 Ribosomal protein L14p/L23e family protein 0.9 0.3 -0.31
14 AT5G67510 Translation protein SH3-like family protein 0.9 0.3 -0.32
15 AT5G35530 Ribosomal protein S3 family protein 0.9 0.33 -0.33
16 AT2G01250 Ribosomal protein L30/L7 family protein 0.9 0.32 -0.34
17 AT1G26880 Ribosomal protein L34e superfamily protein 0.9 0.3 -0.31
18 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.9 0.3 -0.32
19 AT5G47700 60S acidic ribosomal protein family 0.9 0.3 -0.32
20 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.9 0.3 -0.3
21 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.9 0.33 -0.32
22 AT4G16720 Ribosomal protein L23/L15e family protein 0.89 0.31 -0.3
23 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.89 0.3 -0.34
24 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.89 0.31 -0.34
25 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.89 0.31 -0.31
26 AT3G23390 Zinc-binding ribosomal protein family protein 0.89 0.31 -0.31
27 AT3G56340 Ribosomal protein S26e family protein 0.89 0.32 -0.32
28 AT3G60770 Ribosomal protein S13/S15 0.89 0.32 -0.29
29 AT3G09500 Ribosomal L29 family protein 0.89 0.3 -0.29
30 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.89 0.31 -0.32
31 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.89 0.31 -0.33
32 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.89 0.31 -0.32
33 AT2G34480 Ribosomal protein L18ae/LX family protein 0.89 0.3 -0.32
34 AT3G11510 Ribosomal protein S11 family protein 0.88 0.33 -0.33
35 AT1G34030 Ribosomal protein S13/S18 family 0.88 0.32 -0.3
36 AT2G27720 60S acidic ribosomal protein family 0.88 0.33 -0.34
37 AT3G02080 Ribosomal protein S19e family protein 0.88 0.31 -0.33
38 AT5G61170 Ribosomal protein S19e family protein 0.88 0.32 -0.31
39 AT4G15000 Ribosomal L27e protein family 0.88 0.32 -0.31
40 AT3G07110 Ribosomal protein L13 family protein 0.88 0.3 -0.34
41 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.88 0.31 -0.31
42 AT3G04920 Ribosomal protein S24e family protein 0.87 0.31 -0.32
43 AT3G53890 Ribosomal protein S21e 0.87 0.33 -0.32
44 AT4G25890 60S acidic ribosomal protein family 0.87 0.32 -0.33
45 AT3G53430 Ribosomal protein L11 family protein 0.87 0.29 -0.32
46 AT3G05560 Ribosomal L22e protein family 0.87 0.33 -0.3
47 AT5G15200 Ribosomal protein S4 0.87 0.32 -0.31
48 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.87 0.32 -0.31
49 AT5G56670 Ribosomal protein S30 family protein 0.87 0.31 -0.32
50 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.87 0.32 -0.31
51 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.87 0.31 -0.31
52 AT3G04840 Ribosomal protein S3Ae 0.87 0.3 -0.32
53 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.31 -0.32
54 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.87 0.33 -0.32
55 AT1G29250 Alba DNA/RNA-binding protein 0.87 0.3 -0.33
56 AT3G06680 Ribosomal L29e protein family 0.87 0.32 -0.3
57 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.87 0.32 -0.32
58 AT3G16940 calmodulin binding;transcription regulators -0.86 0.33 -0.33
59 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.86 0.3 -0.31
60 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.86 0.32 -0.33
61 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.86 0.33 -0.3
62 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.86 0.32 -0.33
63 AT2G39390 Ribosomal L29 family protein 0.86 0.3 -0.33
64 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.86 0.3 -0.33
65 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.85 0.32 -0.3
66 AT2G33370 Ribosomal protein L14p/L23e family protein 0.85 0.33 -0.31
67 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.85 0.31 -0.3
68 AT4G31985 Ribosomal protein L39 family protein 0.85 0.32 -0.3
69 AT5G23900 Ribosomal protein L13e family protein 0.85 0.31 -0.31
70 AT2G25210 Ribosomal protein L39 family protein 0.85 0.32 -0.33
71 AT1G75560 zinc knuckle (CCHC-type) family protein 0.85 0.31 -0.3
72 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.85 0.34 -0.33
73 AT2G20450 Ribosomal protein L14 0.85 0.33 -0.33
74 AT3G16780 Ribosomal protein L19e family protein 0.85 0.31 -0.3
75 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.85 0.3 -0.33
76 AT1G18540 Ribosomal protein L6 family protein 0.85 0.31 -0.28
77 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.85 0.29 -0.32
78 AT3G02560 Ribosomal protein S7e family protein 0.85 0.3 -0.32
79 AT2G32380 Transmembrane protein 97, predicted 0.85 0.31 -0.32
80 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.84 0.31 -0.32
81 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.84 0.33 -0.32
82 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.84 0.29 -0.31
83 AT1G01100 60S acidic ribosomal protein family 0.84 0.29 -0.32
84 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.84 0.32 -0.3
85 AT5G27700 Ribosomal protein S21e 0.84 0.31 -0.3
86 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.84 0.32 -0.32
87 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.84 0.3 -0.31
88 AT3G60245 Zinc-binding ribosomal protein family protein 0.84 0.3 -0.3
89 AT3G62940 Cysteine proteinases superfamily protein 0.84 0.32 -0.32
90 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.84 0.3 -0.33
91 AT3G09630 Ribosomal protein L4/L1 family 0.84 0.31 -0.32
92 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.84 0.3 -0.33
93 AT2G27710 60S acidic ribosomal protein family 0.83 0.3 -0.32
94 AT2G36160 Ribosomal protein S11 family protein 0.83 0.31 -0.32
95 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.83 0.34 -0.32
96 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.83 0.34 -0.3
97 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 0.83 0.31 -0.33
98 AT3G11250 Ribosomal protein L10 family protein 0.83 0.31 -0.34
99 AT5G22440 Ribosomal protein L1p/L10e family 0.83 0.33 -0.33
100 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.83 0.28 -0.31
101 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.83 0.31 -0.33
102 AT1G04340 HR-like lesion-inducing protein-related 0.82 0.33 -0.31
103 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.82 0.32 -0.33
104 AT1G27400 Ribosomal protein L22p/L17e family protein 0.82 0.32 -0.34
105 AT4G29390 Ribosomal protein S30 family protein 0.82 0.31 -0.3
106 AT1G14980 chaperonin 10 chaperonin 10 0.82 0.3 -0.3
107 AT4G13170 Ribosomal protein L13 family protein 0.82 0.32 -0.32
108 AT5G23290 prefoldin 5 prefoldin 5 0.82 0.32 -0.32
109 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.82 0.3 -0.3
110 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.82 0.28 -0.32
111 AT1G74270 Ribosomal protein L35Ae family protein 0.82 0.33 -0.32
112 AT1G48830 Ribosomal protein S7e family protein 0.82 0.34 -0.3
113 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.82 0.3 -0.3
114 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.82 0.33 -0.33
115 AT4G26230 Ribosomal protein L31e family protein 0.82 0.3 -0.32
116 AT4G36210 Protein of unknown function (DUF726) -0.8 0.33 -0.29
117 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.8 0.32 -0.33
118 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.79 0.32 -0.31
119 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.78 0.33 -0.32
120 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.77 0.33 -0.31
121 AT3G24740 Protein of unknown function (DUF1644) -0.77 0.32 -0.29
122 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.76 0.33 -0.31
123 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.76 0.31 -0.33
124 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.76 0.3 -0.32
125 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.76 0.29 -0.3
126 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.75 0.31 -0.31
127 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.74 0.3 -0.32
128 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.74 0.3 -0.31
129 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.73 0.29 -0.32
130 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.73 0.3 -0.31
131 AT3G08020 PHD finger family protein -0.73 0.31 -0.3
132 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.72 0.33 -0.3
133 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.72 0.32 -0.3
134 AT1G28260 Telomerase activating protein Est1 -0.72 0.34 -0.31
135 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.71 0.33 -0.31
136 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.71 0.32 -0.31
137 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.71 0.34 -0.32
138 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.71 0.33 -0.31
139 AT2G28400 Protein of unknown function, DUF584 -0.71 0.31 -0.3
140 AT4G03200 catalytics -0.71 0.31 -0.32
141 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.71 0.32 -0.31
142 AT1G68570 Major facilitator superfamily protein -0.69 0.33 -0.31
143 AT4G32160 Phox (PX) domain-containing protein -0.68 0.31 -0.32
144 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.67 0.3 -0.3
145 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.67 0.3 -0.31
146 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.66 0.32 -0.3
147 AT3G01320 SIN3-like 1 SIN3-like 1 -0.66 0.31 -0.31
148 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.78 0.46 -0.46
150 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.71 0.32 -0.3 C0260
151 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.7 0.36 -0.3 C0189
152 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.69 0.45 -0.46 C0193
153 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.68 0.3 -0.31 C0257