AT1G52550 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G52550
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast hits to 51 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other Eukaryotes - 10 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast
hits to 51 proteins in 18 species: Archae - 0; Bacteria -
8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other
Eukaryotes - 10 (source: NCBI BLink).		 1 0.3 -0.3
2 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.75 0.31 -0.33
3 AT1G28320 protease-related DEG15 0.75 0.3 -0.32
4 AT2G22530 Alkaline-phosphatase-like family protein 0.71 0.33 -0.3
5 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.33
6 AT2G43970 RNA-binding protein 0.69 0.36 -0.31
7 AT5G40970 Protein of unknown function (DUF 3339) 0.68 0.31 -0.32
8 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 0.68 0.32 -0.32
9 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.33 -0.32
10 AT3G20620 F-box family protein-related 0.65 0.31 -0.33
11 AT1G32860 Glycosyl hydrolase superfamily protein -0.65 0.29 -0.32
12 AT1G17340 Phosphoinositide phosphatase family protein 0.65 0.33 -0.3
13 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.64 0.32 -0.3
14 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.64 0.33 -0.34
15 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 -0.63 0.31 -0.32
16 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.63 0.34 -0.3
17 AT3G23200 Uncharacterised protein family (UPF0497) 0.63 0.32 -0.31
18 AT1G49560 Homeodomain-like superfamily protein -0.62 0.31 -0.32
19 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.62 0.31 -0.29
20 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.62 0.29 -0.32
21 AT1G59520 CW7 CW7 0.62 0.3 -0.32
22 AT5G24270 Calcium-binding EF-hand family protein SALT OVERLY SENSITIVE 3,
CALCINEURIN B-LIKE PROTEIN 4, SALT
OVERLY SENSITIVE 3		 -0.61 0.32 -0.31
23 AT2G32850 Protein kinase superfamily protein 0.61 0.28 -0.33
24 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 0.61 0.29 -0.3
25 AT5G15240 Transmembrane amino acid transporter family protein 0.61 0.3 -0.31
26 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.61 0.31 -0.31
27 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 0.61 0.31 -0.3
28 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.6 0.31 -0.3
29 AT1G48430 Dihydroxyacetone kinase 0.6 0.33 -0.32
30 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.6 0.31 -0.33
31 AT3G05250 RING/U-box superfamily protein 0.6 0.31 -0.32
32 AT1G61850 phospholipases;galactolipases 0.59 0.31 -0.32
33 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.59 0.32 -0.32
34 AT5G63280 C2H2-like zinc finger protein 0.59 0.31 -0.3
35 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein 0.58 0.34 -0.32
36 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.58 0.29 -0.32
37 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 0.58 0.31 -0.31
38 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1		 0.58 0.31 -0.29
39 AT5G40780 lysine histidine transporter 1 lysine histidine transporter 1 -0.58 0.34 -0.31
40 AT3G45600 tetraspanin3 tetraspanin3 -0.57 0.3 -0.33
41 AT4G15780 vesicle-associated membrane protein 724 vesicle-associated membrane
protein 724, vesicle-associated
membrane protein 724		 0.57 0.34 -0.31
42 AT5G54680 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 105,
iaa-leucine resistant3		 0.57 0.3 -0.32
43 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 0.57 0.34 -0.31
44 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.57 0.3 -0.31
45 AT5G55810 nicotinate/nicotinamide mononucleotide adenyltransferase nicotinate/nicotinamide
mononucleotide adenyltransferase,
nicotinate/nicotinamide
mononucleotide adenyltransferase		 0.57 0.31 -0.3
46 AT2G32900 centromere/kinetochore protein, putative (ZW10) ATZW10 0.56 0.33 -0.31
47 AT2G19190 FLG22-induced receptor-like kinase 1 FLG22-induced receptor-like kinase
1		 -0.56 0.3 -0.32
48 AT5G13520 peptidase M1 family protein -0.56 0.3 -0.31
49 AT4G33330 plant glycogenin-like starch initiation protein 3 glucuronic acid substitution of
xylan 2, plant glycogenin-like
starch initiation protein 3		 -0.56 0.31 -0.3
50 AT2G43620 Chitinase family protein -0.55 0.31 -0.33
51 AT5G47970 Aldolase-type TIM barrel family protein 0.55 0.34 -0.3
52 AT5G20940 Glycosyl hydrolase family protein 0.55 0.3 -0.31
53 AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein 0.55 0.32 -0.28
54 AT3G27470 Protein of unknown function (DUF707) 0.54 0.32 -0.32
55 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 0.54 0.35 -0.33
56 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.31 -0.31
57 AT5G55060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in
80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi
- 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33
(source: NCBI BLink).		 0.54 0.33 -0.31
58 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.54 0.32 -0.31
59 AT2G12610 transposable element gene -0.54 0.31 -0.32
60 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.53 0.32 -0.32
61 AT5G51410 LUC7 N_terminus domain-containing protein -0.53 0.31 -0.33
62 AT5G48390 Tetratricopeptide repeat (TPR)-like superfamily protein ATZIP4 -0.53 0.32 -0.31
63 AT5G02190 Eukaryotic aspartyl protease family protein ARABIDOPSIS THALIANA ASPARTIC
PROTEASE 38, EMBRYO DEFECTIVE 24,
PROMOTION OF CELL SURVIVAL 1		 -0.53 0.3 -0.31
64 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c		 -0.53 0.31 -0.31
65 AT1G32040 transposable element gene -0.52 0.33 -0.33
66 AT4G31980 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF247, plant (InterPro:IPR004158),
Protein of unknown function DUF862, eukaryotic
(InterPro:IPR008580); BEST Arabidopsis thaliana protein
match is: Plant protein of unknown function (DUF247)
(TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in
183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi
- 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178
(source: NCBI BLink).		 -0.52 0.32 -0.31
67 AT4G35040 Basic-leucine zipper (bZIP) transcription factor family
protein		 bZIP19 -0.51 0.34 -0.34
68 AT4G39640 gamma-glutamyl transpeptidase 1 gamma-glutamyl transpeptidase 1 -0.51 0.32 -0.33
69 AT1G35663 transposable element gene -0.51 0.31 -0.32
70 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 -0.51 0.31 -0.32
71 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 -0.51 0.3 -0.32
72 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 -0.5 0.31 -0.32
73 AT3G25420 serine carboxypeptidase-like 21 serine carboxypeptidase-like 21 -0.5 0.3 -0.33
74 AT2G39200 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 12,
MILDEW RESISTANCE LOCUS O 12		 -0.5 0.34 -0.3