AT1G53830 : pectin methylesterase 2
Query Information
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AGICode AT1G53830
Description pectin methylesterase 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 1 0.33 -0.31
2 AT5G28300 Duplicated homeodomain-like superfamily protein -0.78 0.32 -0.31
3 AT1G71870 MATE efflux family protein 0.75 0.33 -0.31
4 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 0.74 0.31 -0.29
5 AT4G28940 Phosphorylase superfamily protein 0.72 0.31 -0.32
6 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 0.72 0.3 -0.3
7 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein 0.7 0.32 -0.31
8 AT5G18760 RING/U-box superfamily protein -0.7 0.32 -0.29
9 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 -0.7 0.29 -0.32
10 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.69 0.31 -0.33
11 AT3G22120 cell wall-plasma membrane linker protein cell wall-plasma membrane linker
protein		 -0.69 0.29 -0.31
12 AT5G12420 O-acyltransferase (WSD1-like) family protein 0.69 0.34 -0.29
13 AT3G25410 Sodium Bile acid symporter family -0.69 0.32 -0.33
14 AT4G36810 geranylgeranyl pyrophosphate synthase 1 geranylgeranyl pyrophosphate
synthase 1		 -0.68 0.3 -0.33
15 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 -0.68 0.32 -0.33
16 AT2G35380 Peroxidase superfamily protein 0.68 0.29 -0.32
17 AT2G32300 uclacyanin 1 uclacyanin 1 0.68 0.3 -0.32
18 AT1G65410 non-intrinsic ABC protein 11 ATP-binding cassette I13,
non-intrinsic ABC protein 11,
non-intrinsic ABC protein 11,
TRIGALACTOSYLDIACYLGLYCEROL 3		 -0.67 0.31 -0.3
19 AT1G53230 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
3		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3		 -0.67 0.31 -0.3
20 AT3G61460 brassinosteroid-responsive RING-H2 brassinosteroid-responsive RING-H2 -0.67 0.31 -0.3
21 AT5G59610 Chaperone DnaJ-domain superfamily protein -0.67 0.31 -0.32
22 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 0.67 0.33 -0.31
23 AT2G30040 mitogen-activated protein kinase kinase kinase 14 mitogen-activated protein kinase
kinase kinase 14		 0.67 0.31 -0.31
24 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 0.67 0.29 -0.31
25 AT3G59370 Vacuolar calcium-binding protein-related 0.66 0.34 -0.32
26 AT5G47110 Chlorophyll A-B binding family protein LIL3:2 -0.66 0.31 -0.31
27 AT5G16810 Protein kinase superfamily protein -0.66 0.31 -0.32
28 AT5G44550 Uncharacterised protein family (UPF0497) 0.66 0.32 -0.29
29 AT5G38030 MATE efflux family protein 0.66 0.32 -0.32
30 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.35 -0.29
31 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 0.66 0.3 -0.3
32 AT1G28130 Auxin-responsive GH3 family protein GH3.17 0.66 0.31 -0.33
33 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 0.66 0.3 -0.3
34 AT5G03900 Iron-sulphur cluster biosynthesis family protein -0.65 0.3 -0.32
35 AT3G19810 Protein of unknown function (DUF177) -0.65 0.32 -0.31
36 AT2G21100 Disease resistance-responsive (dirigent-like protein)
family protein		 0.65 0.34 -0.3
37 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 0.65 0.3 -0.3
38 AT5G37690 SGNH hydrolase-type esterase superfamily protein 0.65 0.33 -0.32
39 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 0.64 0.35 -0.31
40 AT5G08740 NAD(P)H dehydrogenase C1 NAD(P)H dehydrogenase C1 -0.64 0.32 -0.32
41 AT1G55030 RNI-like superfamily protein 0.64 0.31 -0.33
42 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 0.64 0.29 -0.3
43 AT4G28410 Tyrosine transaminase family protein 0.64 0.31 -0.3
44 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 -0.63 0.32 -0.31
45 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.63 0.31 -0.29
46 AT1G27700 Syntaxin/t-SNARE family protein -0.63 0.3 -0.3
47 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.31 -0.32
48 AT4G16490 ARM repeat superfamily protein -0.63 0.3 -0.33
49 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 -0.63 0.32 -0.31
50 AT3G18080 B-S glucosidase 44 B-S glucosidase 44 -0.63 0.32 -0.32
51 AT5G19410 ABC-2 type transporter family protein ATP-binding cassette G23 0.63 0.33 -0.32
52 AT4G33480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3727 (InterPro:IPR022203);
Has 348 Blast hits to 348 proteins in 78 species: Archae -
0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183;
Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).		 -0.63 0.33 -0.31
53 AT2G28800 63 kDa inner membrane family protein ALBINO 3 -0.63 0.32 -0.3
54 AT3G16290 AAA-type ATPase family protein embryo defective 2083 -0.63 0.33 -0.31
55 AT5G15180 Peroxidase superfamily protein 0.63 0.33 -0.29
56 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 -0.63 0.32 -0.32
57 AT5G54190 protochlorophyllide oxidoreductase A protochlorophyllide oxidoreductase
A		 -0.62 0.34 -0.34
58 AT2G03680 spiral1 SKU6, SPIRAL1 -0.62 0.3 -0.34
59 AT5G36210 alpha/beta-Hydrolases superfamily protein -0.62 0.33 -0.32
60 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 -0.62 0.32 -0.31
61 AT3G61490 Pectin lyase-like superfamily protein -0.62 0.31 -0.33
62 AT4G38180 FAR1-related sequence 5 FAR1-related sequence 5 -0.62 0.32 -0.32
63 AT2G43390 unknown protein; Has 7 Blast hits to 7 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.29
64 AT4G36610 alpha/beta-Hydrolases superfamily protein 0.62 0.34 -0.3
65 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.62 0.32 -0.34
66 AT3G45960 expansin-like A3 expansin-like A3, ATEXPL3, ATHEXP
BETA 2.3, expansin-like A3, EXPL3		 0.62 0.31 -0.31
67 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein -0.62 0.31 -0.31
68 AT5G18590 Galactose oxidase/kelch repeat superfamily protein -0.62 0.29 -0.32
69 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.3 -0.34
70 AT1G35310 MLP-like protein 168 MLP-like protein 168 -0.61 0.31 -0.31
71 AT3G06200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.28 -0.33
72 AT1G29120 Hydrolase-like protein family -0.61 0.33 -0.32
73 AT1G32160 Protein of unknown function (DUF760) -0.61 0.33 -0.3
74 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase 0.61 0.32 -0.32
75 AT5G49350 Glycine-rich protein family 0.61 0.31 -0.32
76 AT5G09480 hydroxyproline-rich glycoprotein family protein 0.61 0.31 -0.31
77 AT2G33500 B-box type zinc finger protein with CCT domain -0.61 0.32 -0.33
78 AT1G03000 peroxin 6 peroxin 6 -0.61 0.32 -0.34
79 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein -0.61 0.3 -0.31
80 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 -0.61 0.33 -0.31
81 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 -0.61 0.32 -0.32
82 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.61 0.3 -0.32
83 AT4G02260 RELA/SPOT homolog 1 RELA-SPOT HOMOLOG 1, RELA/SPOT
HOMOLOG 1, RELA/SPOT homolog 1		 -0.61 0.3 -0.3
84 AT4G14605 Mitochondrial transcription termination factor family
protein		 -0.61 0.31 -0.34
85 AT4G29590 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.3 -0.29
86 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 -0.6 0.3 -0.29
87 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.31 -0.32
88 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9		 -0.6 0.32 -0.32
89 AT5G25360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.32 -0.33
90 AT1G04140 Transducin family protein / WD-40 repeat family protein -0.6 0.34 -0.29
91 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 -0.6 0.34 -0.3
92 AT5G65610 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.29 -0.32
93 AT1G31410 putrescine-binding periplasmic protein-related -0.6 0.33 -0.33
94 AT5G25510 Protein phosphatase 2A regulatory B subunit family protein -0.6 0.31 -0.32
95 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.32 -0.3
96 AT2G23540 GDSL-like Lipase/Acylhydrolase superfamily protein 0.59 0.3 -0.32
97 AT3G03900 adenosine-5'-phosphosulfate (APS) kinase 3 adenosine-5'-phosphosulfate (APS)
kinase 3		 -0.59 0.32 -0.32
98 AT2G40670 response regulator 16 response regulator 16, response
regulator 16		 -0.59 0.31 -0.31
99 AT5G15790 RING/U-box superfamily protein -0.59 0.32 -0.32
100 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 0.59 0.32 -0.32
101 AT2G43670 Carbohydrate-binding X8 domain superfamily protein 0.58 0.32 -0.3
102 AT3G27320 alpha/beta-Hydrolases superfamily protein -0.58 0.3 -0.3
103 AT5G13050 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate
cycloligase		 -0.58 0.3 -0.32
104 AT5G63860 Regulator of chromosome condensation (RCC1) family protein UVB-RESISTANCE 8 -0.58 0.29 -0.31
105 AT4G17215 Pollen Ole e 1 allergen and extensin family protein 0.58 0.31 -0.3
106 AT4G31780 monogalactosyl diacylglycerol synthase 1 EMBRYO DEFECTIVE 2797,
monogalactosyl diacylglycerol
synthase 1,
MONOGALACTOSYLDIACYLGLYCEROL
SYNTHASE A, UDP-glycosyl
transferase 81A1		 -0.58 0.31 -0.32
107 AT3G06390 Uncharacterised protein family (UPF0497) 0.58 0.32 -0.33
108 AT3G18810 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 6, proline-rich
extensin-like receptor kinase 6		 -0.58 0.35 -0.33
109 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein -0.58 0.31 -0.34
110 AT4G33790 Jojoba acyl CoA reductase-related male sterility protein ECERIFERUM 4, FATTY ACID REDUCTASE
3, G7		 0.58 0.34 -0.28
111 AT1G30860 RING/U-box superfamily protein 0.58 0.29 -0.31
112 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 -0.58 0.3 -0.31
113 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.58 0.3 -0.31
114 AT2G18800 xyloglucan endotransglucosylase/hydrolase 21 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 21,
xyloglucan
endotransglucosylase/hydrolase 21		 0.58 0.33 -0.34
115 AT3G12100 Cation efflux family protein -0.58 0.31 -0.3
116 AT3G47390 cytidine/deoxycytidylate deaminase family protein PHOTOSENSITIVE 1 -0.58 0.31 -0.32
117 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase -0.57 0.33 -0.31
118 AT2G32040 Major facilitator superfamily protein -0.57 0.34 -0.31
119 AT1G47480 alpha/beta-Hydrolases superfamily protein 0.57 0.35 -0.31
120 AT4G24140 alpha/beta-Hydrolases superfamily protein 0.57 0.32 -0.3
121 AT3G51030 thioredoxin H-type 1 ARABIDOPSIS THALIANA THIOREDOXIN
H-TYPE 1, thioredoxin H-type 1,
thioredoxin H-type 1		 0.57 0.32 -0.3
122 AT1G76940 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.32 -0.31
123 AT5G44785 organellar single-stranded DNA binding protein 3 organellar single-stranded DNA
binding protein 3		 -0.57 0.33 -0.32
124 AT1G65480 PEBP (phosphatidylethanolamine-binding protein) family
protein		 FLOWERING LOCUS T 0.57 0.31 -0.31
125 AT1G70850 MLP-like protein 34 MLP-like protein 34 0.57 0.33 -0.33
126 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2		 -0.57 0.3 -0.36
127 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 0.56 0.33 -0.29
128 AT5G11540 D-arabinono-1,4-lactone oxidase family protein 0.56 0.31 -0.34
129 AT3G54000 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.31 -0.33
130 AT3G53510 ABC-2 type transporter family protein ATP-binding cassette G20 0.56 0.32 -0.3
131 AT5G38020 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.35 -0.32
132 AT1G55430 Cysteine/Histidine-rich C1 domain family protein 0.55 0.29 -0.31
133 AT2G05910 Protein of unknown function (DUF567) 0.55 0.31 -0.32
134 AT2G16980 Major facilitator superfamily protein 0.55 0.31 -0.3
135 AT3G22930 calmodulin-like 11 calmodulin-like 11 0.54 0.31 -0.32
136 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 0.54 0.33 -0.31
137 AT4G24130 Protein of unknown function, DUF538 0.54 0.31 -0.31
138 AT2G14100 cytochrome P450, family 705, subfamily A, polypeptide 13 cytochrome P450, family 705,
subfamily A, polypeptide 13		 0.54 0.33 -0.31
139 AT5G65530 Protein kinase superfamily protein 0.54 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.65 0.44 -0.47 C0196