AT1G42420 : -
Query Information
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AGICode AT1G42420
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G42420 transposable element gene 1 0.33 -0.32
2 AT1G20750 RAD3-like DNA-binding helicase protein 0.83 0.29 -0.3
3 AT5G27190 transposable element gene -0.74 0.28 -0.34
4 AT1G51210 UDP-Glycosyltransferase superfamily protein 0.72 0.3 -0.3
5 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 0.7 0.3 -0.3
6 AT5G34800 transposable element gene -0.7 0.33 -0.31
7 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 0.7 0.33 -0.32
8 AT3G17100 sequence-specific DNA binding transcription factors 0.69 0.31 -0.32
9 AT2G06310 transposable element gene 0.69 0.32 -0.31
10 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.31 -0.29
11 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.3 -0.31
12 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 -0.68 0.32 -0.32
13 AT3G24280 small acidic protein 2 small acidic protein 2 -0.68 0.32 -0.31
14 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 0.68 0.32 -0.3
15 AT2G23920 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.3 -0.31
16 AT3G05740 RECQ helicase l1 RECQ helicase l1 -0.68 0.3 -0.29
17 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 0.68 0.33 -0.32
18 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.33 -0.29
19 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7		 0.68 0.31 -0.31
20 AT2G11210 transposable element gene 0.67 0.31 -0.34
21 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 -0.67 0.29 -0.32
22 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 -0.67 0.3 -0.3
23 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.34 -0.32
24 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 -0.67 0.32 -0.31
25 AT3G11380 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.32 -0.32
26 AT1G73660 protein tyrosine kinase family protein -0.67 0.31 -0.31
27 AT4G27460 Cystathionine beta-synthase (CBS) family protein 0.66 0.3 -0.32
28 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.31 -0.32
29 AT3G20080 cytochrome P450, family 705, subfamily A, polypeptide 15 cytochrome P450, family 705,
subfamily A, polypeptide 15		 0.66 0.31 -0.3
30 AT1G39750 transposable element gene 0.66 0.32 -0.31
31 AT1G68610 PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 0.66 0.31 -0.33
32 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 -0.66 0.31 -0.3
33 AT1G32950 Subtilase family protein 0.66 0.32 -0.33
34 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.66 0.3 -0.29
35 AT1G31040 PLATZ transcription factor family protein 0.66 0.34 -0.33
36 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 0.65 0.3 -0.3
37 AT4G19780 transposable element gene -0.65 0.33 -0.33
38 AT5G24340 3'-5' exonuclease domain-containing protein -0.65 0.32 -0.33
39 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.3 -0.31
40 AT3G42320 transposable element gene -0.65 0.33 -0.3
41 AT5G29100 transposable element gene -0.65 0.31 -0.31
42 AT1G47655 Dof-type zinc finger DNA-binding family protein 0.65 0.31 -0.34
43 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 -0.65 0.33 -0.3
44 AT1G18340 basal transcription factor complex subunit-related -0.65 0.33 -0.33
45 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.3
46 AT3G43040 transposable element gene 0.65 0.31 -0.3
47 AT1G26350 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.3 -0.3
48 AT5G55980 serine-rich protein-related 0.64 0.3 -0.31
49 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 -0.64 0.3 -0.32
50 AT1G11270 F-box and associated interaction domains-containing protein 0.64 0.32 -0.32
51 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.64 0.33 -0.29
52 AT2G11590 transposable element gene -0.64 0.31 -0.33
53 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 -0.64 0.32 -0.33
54 AT2G14020 transposable element gene -0.64 0.33 -0.32
55 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein 0.64 0.29 -0.31
56 AT3G53590 Leucine-rich repeat protein kinase family protein 0.64 0.33 -0.29
57 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 0.64 0.31 -0.3
58 AT5G14980 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.32
59 AT5G35420 transposable element gene -0.63 0.3 -0.29
60 AT1G31450 Eukaryotic aspartyl protease family protein -0.63 0.3 -0.34
61 AT2G06120 transposable element gene -0.63 0.31 -0.32
62 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.63 0.3 -0.31
63 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.63 0.33 -0.33
64 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 -0.63 0.31 -0.32
65 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.63 0.31 -0.31
66 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 -0.63 0.31 -0.31
67 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.33
68 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.63 0.33 -0.32
69 AT1G53720 cyclophilin 59 CYCLOPHILIN 59, cyclophilin 59 -0.63 0.32 -0.32
70 AT5G15570 Bromodomain transcription factor -0.63 0.32 -0.32
71 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.33 -0.33
72 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.3 -0.34
73 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.63 0.31 -0.31
74 AT1G30710 FAD-binding Berberine family protein 0.63 0.33 -0.32
75 AT5G28700 transposable element gene -0.63 0.31 -0.34
76 AT3G31915 transposable element gene 0.63 0.31 -0.32
77 AT3G22920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.62 0.31 -0.32
78 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.62 0.31 -0.31
79 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.62 0.31 -0.31
80 AT3G10890 Glycosyl hydrolase superfamily protein 0.62 0.31 -0.3
81 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.62 0.32 -0.31
82 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 -0.62 0.31 -0.32
83 AT4G12930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal, male
gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G28930.1); Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.31
84 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11		 -0.62 0.3 -0.3
85 AT5G17150 Cystatin/monellin superfamily protein -0.62 0.29 -0.3
86 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 -0.62 0.33 -0.3
87 AT4G11440 Mitochondrial substrate carrier family protein -0.61 0.29 -0.29
88 AT5G11490 adaptin family protein -0.61 0.32 -0.31
89 AT1G14020 O-fucosyltransferase family protein -0.61 0.31 -0.3
90 ATMG00320 hypothetical protein ORF127 0.61 0.32 -0.32
91 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein 0.61 0.34 -0.32
92 AT3G12160 RAB GTPase homolog A4D ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG A4D, RAB GTPase homolog
A4D		 -0.61 0.3 -0.29
93 AT1G19220 auxin response factor 19 AUXIN RESPONSE FACTOR11, auxin
response factor 19,
indole-3-acetic acid inducible 22		 0.61 0.28 -0.33
94 AT2G46260 BTB/POZ/Kelch-associated protein 0.61 0.31 -0.32
95 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 -0.61 0.31 -0.31
96 AT4G11700 Protein of unknown function (DUF626) 0.61 0.33 -0.31
97 AT2G06500 hAT family dimerisation domain 0.61 0.32 -0.31
98 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 -0.61 0.33 -0.33
99 AT2G30540 Thioredoxin superfamily protein 0.61 0.31 -0.31
100 AT2G36700 Pectin lyase-like superfamily protein -0.6 0.31 -0.32
101 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.6 0.31 -0.33
102 AT1G20480 AMP-dependent synthetase and ligase family protein 0.6 0.31 -0.34
103 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.32 -0.33
104 AT4G11730 Cation transporter/ E1-E2 ATPase family protein 0.6 0.31 -0.32
105 AT5G43120 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein -0.6 0.34 -0.31
106 AT2G04020 GDSL-like Lipase/Acylhydrolase superfamily protein 0.6 0.33 -0.31
107 AT3G04900 Heavy metal transport/detoxification superfamily protein 0.6 0.33 -0.31
108 AT5G49750 Leucine-rich repeat (LRR) family protein 0.6 0.32 -0.31
109 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 -0.6 0.31 -0.32
110 AT2G16190 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13;
Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.31 -0.29
111 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 0.6 0.34 -0.32
112 AT5G61980 ARF-GAP domain 1 ARF-GAP domain 1 0.59 0.31 -0.3
113 AT1G47765 F-box and associated interaction domains-containing protein 0.59 0.32 -0.3
114 AT5G46270 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.32 -0.32
115 AT5G16690 origin recognition complex subunit 3 ATORC3, origin recognition complex
subunit 3		 -0.59 0.29 -0.3
116 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.59 0.33 -0.32
117 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 -0.59 0.31 -0.31
118 AT1G06470 Nucleotide/sugar transporter family protein -0.59 0.31 -0.31
119 AT5G48290 Heavy metal transport/detoxification superfamily protein -0.59 0.32 -0.3
120 AT2G04220 Plant protein of unknown function (DUF868) -0.59 0.31 -0.34
121 AT5G11570 Major facilitator superfamily protein -0.59 0.32 -0.29
122 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.32
123 AT1G04700 PB1 domain-containing protein tyrosine kinase 0.59 0.31 -0.29
124 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 0.59 0.32 -0.31
125 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.59 0.31 -0.32
126 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.59 0.3 -0.31
127 AT1G70460 root hair specific 10 proline-rich extensin-like
receptor kinase 13, proline-rich
extensin-like receptor kinase 13,
root hair specific 10		 0.59 0.31 -0.32
128 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.59 0.31 -0.31
129 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 -0.59 0.33 -0.32
130 AT4G03840 transposable element gene 0.58 0.33 -0.32
131 AT4G12410 SAUR-like auxin-responsive protein family 0.58 0.28 -0.34
132 AT5G27160 transposable element gene 0.58 0.32 -0.33
133 AT1G63580 Receptor-like protein kinase-related family protein 0.58 0.33 -0.33
134 AT5G34830 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.31 -0.3