AT1G68660 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G68660
Description Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 1 0.3 -0.3
2 AT1G69935 short hypocotyl in white light1 SHORT HYPOCOTYL IN WHITE LIGHT1 0.9 0.29 -0.33
3 AT4G37200 Thioredoxin superfamily protein HIGH CHLOROPHYLL FLUORESCENCE 164 0.86 0.32 -0.32
4 AT2G45740 peroxin 11D peroxin 11D 0.84 0.32 -0.3
5 AT1G31190 myo-inositol monophosphatase like 1 myo-inositol monophosphatase like
1		 0.83 0.29 -0.32
6 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 0.82 0.34 -0.28
7 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.82 0.34 -0.32
8 AT1G34640 peptidases 0.81 0.31 -0.32
9 AT5G16940 carbon-sulfur lyases 0.8 0.31 -0.33
10 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting		 0.8 0.34 -0.32
11 AT1G76730 NagB/RpiA/CoA transferase-like superfamily protein 0.8 0.31 -0.33
12 AT1G10360 glutathione S-transferase TAU 18 glutathione S-transferase TAU 18,
GLUTATHIONE S-TRANSFERASE 29,
glutathione S-transferase TAU 18		 0.8 0.34 -0.29
13 AT1G23400 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ARABIDOPSIS THALIANA HOMOLOG OF
MAIZE CAF2, CAF2		 0.8 0.31 -0.33
14 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase 0.8 0.32 -0.31
15 AT1G69390 homologue of bacterial MinE 1 accumulation and replication of
chloroplasts 12, homologue of
bacterial MinE 1, homologue of
bacterial MinE 1		 0.79 0.32 -0.31
16 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.79 0.32 -0.34
17 AT1G65070 DNA mismatch repair protein MutS, type 2 0.79 0.3 -0.31
18 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.33 -0.33
19 AT2G03550 alpha/beta-Hydrolases superfamily protein 0.79 0.33 -0.33
20 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 0.79 0.33 -0.3
21 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.79 0.32 -0.31
22 AT1G35340 ATP-dependent protease La (LON) domain protein 0.79 0.31 -0.31
23 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein 0.79 0.3 -0.3
24 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 60 Blast hits to 60 proteins
in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0;
Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.78 0.31 -0.32
25 AT2G28450 zinc finger (CCCH-type) family protein -0.78 0.29 -0.33
26 AT1G77930 Chaperone DnaJ-domain superfamily protein 0.78 0.31 -0.3
27 AT3G02690 nodulin MtN21 /EamA-like transporter family protein 0.78 0.3 -0.32
28 AT3G17930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3007
(InterPro:IPR021562); Has 236 Blast hits to 236 proteins in
83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80
(source: NCBI BLink).		 0.78 0.33 -0.33
29 AT1G10650 SBP (S-ribonuclease binding protein) family protein 0.77 0.29 -0.32
30 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.77 0.31 -0.3
31 AT2G33735 Chaperone DnaJ-domain superfamily protein 0.77 0.32 -0.32
32 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.77 0.32 -0.29
33 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.77 0.31 -0.3
34 AT5G58330 lactate/malate dehydrogenase family protein 0.77 0.31 -0.33
35 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.76 0.33 -0.31
36 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.76 0.3 -0.29
37 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.76 0.3 -0.3
38 AT4G19830 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.76 0.32 -0.32
39 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 0.76 0.3 -0.33
40 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.34 -0.33
41 AT3G53470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 35 Blast hits to 35 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.32
42 AT2G27290 Protein of unknown function (DUF1279) 0.76 0.33 -0.32
43 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.76 0.29 -0.32
44 AT2G35020 N-acetylglucosamine-1-phosphate uridylyltransferase 2 N-acetylglucosamine-1-phosphate
uridylyltransferase 2		 0.75 0.3 -0.3
45 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 0.75 0.34 -0.34
46 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 -0.75 0.32 -0.31
47 AT5G02240 NAD(P)-binding Rossmann-fold superfamily protein 0.75 0.29 -0.32
48 AT3G29310 calmodulin-binding protein-related -0.75 0.32 -0.3
49 AT1G19000 Homeodomain-like superfamily protein 0.74 0.3 -0.33
50 AT1G32160 Protein of unknown function (DUF760) 0.74 0.32 -0.33
51 AT5G53940 Yippee family putative zinc-binding protein 0.74 0.32 -0.31
52 AT1G68260 Thioesterase superfamily protein 0.74 0.32 -0.32
53 AT3G21760 UDP-Glycosyltransferase superfamily protein HYPOSTATIN RESISTANCE 1 0.74 0.32 -0.33
54 AT3G19800 Protein of unknown function (DUF177) 0.74 0.29 -0.34
55 AT4G33500 Protein phosphatase 2C family protein 0.74 0.31 -0.31
56 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 0.74 0.31 -0.31
57 AT5G03880 Thioredoxin family protein 0.74 0.31 -0.34
58 AT1G78020 Protein of unknown function (DUF581) 0.74 0.32 -0.33
59 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.33 -0.33
60 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.73 0.33 -0.3
61 AT2G24790 CONSTANS-like 3 ATCOL3, CONSTANS-like 3 0.73 0.31 -0.29
62 AT2G33255 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.73 0.31 -0.32
63 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 0.73 0.32 -0.32
64 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 -0.73 0.33 -0.32
65 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 0.73 0.32 -0.33
66 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.73 0.3 -0.31
67 AT5G63930 Leucine-rich repeat protein kinase family protein -0.73 0.31 -0.29
68 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 0.73 0.33 -0.31
69 AT5G22830 magnesium (Mg) transporter 10 magnesium (Mg) transporter 10,
GMN10, magnesium (Mg) transporter
10, MAGNESIUM TRANSPORTER 10,
MRS2-11		 0.73 0.32 -0.31
70 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.33 -0.31
71 AT3G09250 Nuclear transport factor 2 (NTF2) family protein 0.73 0.32 -0.32
72 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 0.73 0.33 -0.32
73 AT2G39110 Protein kinase superfamily protein -0.71 0.32 -0.33
74 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 -0.71 0.33 -0.3
75 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 -0.7 0.32 -0.32
76 AT5G64420 DNA polymerase V family -0.7 0.29 -0.34
77 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 -0.7 0.33 -0.3
78 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.7 0.3 -0.31
79 AT3G11830 TCP-1/cpn60 chaperonin family protein -0.7 0.31 -0.28
80 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 -0.69 0.33 -0.32
81 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.33 -0.33
82 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain -0.69 0.33 -0.32
83 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 -0.69 0.34 -0.33
84 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 -0.69 0.33 -0.34
85 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.69 0.31 -0.32
86 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.68 0.33 -0.32
87 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.68 0.31 -0.31
88 AT5G58210 hydroxyproline-rich glycoprotein family protein -0.68 0.33 -0.33
89 AT2G02160 CCCH-type zinc finger family protein -0.68 0.32 -0.33
90 AT4G04860 DERLIN-2.2 DERLIN-2.2 -0.67 0.34 -0.34
91 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.32 -0.32
92 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.67 0.29 -0.3
93 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.67 0.31 -0.35
94 AT1G76760 thioredoxin Y1 thioredoxin Y1, THIOREDOXIN Y1,
thioredoxin Y1		 -0.66 0.32 -0.31
95 AT4G12240 zinc finger (C2H2 type) family protein -0.66 0.3 -0.3
96 AT4G25730 FtsJ-like methyltransferase family protein -0.66 0.31 -0.32
97 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 -0.66 0.31 -0.3
98 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.66 0.31 -0.31
99 AT1G30080 Glycosyl hydrolase superfamily protein -0.66 0.32 -0.32
100 AT5G16930 AAA-type ATPase family protein -0.66 0.33 -0.32
101 AT1G11390 Protein kinase superfamily protein -0.66 0.33 -0.33
102 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 -0.66 0.31 -0.33
103 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.66 0.32 -0.29
104 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.31 -0.31
105 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.65 0.32 -0.32
106 AT5G09840 Putative endonuclease or glycosyl hydrolase -0.65 0.3 -0.31
107 AT2G36930 zinc finger (C2H2 type) family protein -0.65 0.33 -0.29
108 AT2G24500 Zinc finger protein 622 FZF -0.65 0.32 -0.31
109 AT5G47750 D6 protein kinase like 2 D6 protein kinase like 2, PK5 -0.65 0.33 -0.31
110 AT1G26660 Prefoldin chaperone subunit family protein -0.65 0.32 -0.29
111 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.65 0.3 -0.34
112 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 -0.65 0.32 -0.32
113 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 -0.65 0.33 -0.3
114 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.28 -0.34
115 AT1G77180 chromatin protein family SKIP -0.64 0.31 -0.32
116 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS -0.64 0.31 -0.29
117 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.32 -0.31
118 AT2G25640 SPOC domain / Transcription elongation factor S-II protein -0.64 0.33 -0.32
119 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 -0.64 0.32 -0.31
120 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.35 -0.28
121 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 -0.63 0.32 -0.3
122 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.29 -0.32
123 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.63 0.31 -0.32
124 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.31 -0.31
125 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 -0.63 0.3 -0.32
126 AT5G42950 GYF domain-containing protein -0.63 0.31 -0.34
127 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 -0.63 0.32 -0.32
128 AT5G52820 WD-40 repeat family protein / notchless protein, putative -0.63 0.29 -0.31
129 AT1G13590 phytosulfokine 1 precursor phytosulfokine 1 precursor,
phytosulfokine 1 precursor		 -0.63 0.31 -0.3
130 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 -0.62 0.3 -0.32
131 AT1G61040 plus-3 domain-containing protein vernalization independence 5 -0.62 0.33 -0.34
132 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 -0.62 0.31 -0.31
133 AT5G66390 Peroxidase superfamily protein -0.62 0.31 -0.32
134 AT1G18980 RmlC-like cupins superfamily protein -0.62 0.33 -0.31
135 AT1G51380 DEA(D/H)-box RNA helicase family protein -0.62 0.32 -0.29
136 AT3G62240 RING/U-box superfamily protein -0.62 0.31 -0.32
137 AT3G07750 3'-5'-exoribonuclease family protein -0.62 0.3 -0.31
138 AT2G25520 Drug/metabolite transporter superfamily protein -0.62 0.35 -0.31
139 AT4G20210 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.62 0.33 -0.33