AGICode | AT1G27640 |
Description | Putative role in leaf development. Comparison of SALK_123839C to Columbia under normal growth conditions resulted in a trend toward increased leaf length in the mutant (P=0.13; median 22 for mutant,17 for Columbia) (Ann Stapleton and Delita Pardue, 2009, personal communication). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G27640 | Putative role in leaf development. Comparison of SALK_123839C to Columbia under normal growth conditions resulted in a trend toward increased leaf length in the mutant (P=0.13; median 22 for mutant,17 for Columbia) (Ann Stapleton and Delita Pardue, 2009, personal communication). |
1 | 0.36 | -0.32 | |||
2 | AT1G78990 | HXXXD-type acyl-transferase family protein | -0.63 | 0.32 | -0.31 | |||
3 | AT3G12470 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.61 | 0.31 | -0.33 | |||
4 | AT5G35870 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.55 | 0.32 | -0.32 | |||
5 | AT5G28210 | mRNA capping enzyme family protein | -0.55 | 0.33 | -0.3 | |||
6 | AT5G44550 | Uncharacterised protein family (UPF0497) | -0.54 | 0.29 | -0.31 | |||
7 | AT5G23780 | DOMAIN OF UNKNOWN FUNCTION 724 9 | DOMAIN OF UNKNOWN FUNCTION 724 9, DOMAIN OF UNKNOWN FUNCTION 724 9 |
-0.54 | 0.32 | -0.33 | ||
8 | AT5G54850 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.31 | -0.31 | |||
9 | AT1G55030 | RNI-like superfamily protein | -0.52 | 0.33 | -0.32 | |||
10 | AT2G18380 | GATA transcription factor 20 | GATA transcription factor 20, hanaba taranu like 1 |
-0.52 | 0.31 | -0.32 | ||
11 | AT3G28630 | Protein of unknown function (DUF569) | -0.51 | 0.3 | -0.33 | |||
12 | AT2G17770 | basic region/leucine zipper motif 27 | basic region/leucine zipper motif 27, basic region/leucine zipper motif 27, FD PARALOG |
-0.5 | 0.31 | -0.34 | ||
13 | AT3G22770 | F-box associated ubiquitination effector family protein | -0.5 | 0.34 | -0.32 | |||
14 | AT4G39480 | cytochrome P450, family 96, subfamily A, polypeptide 9 | cytochrome P450, family 96, subfamily A, polypeptide 9 |
0.49 | 0.3 | -0.33 | ||
15 | AT4G03630 | RNI-like superfamily protein | 0.49 | 0.33 | -0.33 | |||
16 | AT3G63470 | serine carboxypeptidase-like 40 | serine carboxypeptidase-like 40 | -0.49 | 0.32 | -0.32 | ||
17 | AT4G35700 | zinc finger (C2H2 type) family protein | DUO1-activated zinc finger 3 | 0.48 | 0.31 | -0.32 | ||
18 | AT4G18180 | Pectin lyase-like superfamily protein | 0.48 | 0.3 | -0.32 | |||
19 | AT3G49690 | myb domain protein 84 | MYB DOMAIN PROTEIN 84, myb domain protein 84, REGULATOR OF AXILLARY MERISTEMS3 |
-0.48 | 0.3 | -0.3 | ||
20 | AT5G38310 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.48 | 0.31 | -0.31 | |||
21 | AT3G54570 | Plant calmodulin-binding protein-related | -0.48 | 0.34 | -0.31 | |||
22 | AT2G22180 | hydroxyproline-rich glycoprotein family protein | -0.47 | 0.31 | -0.32 | |||
23 | AT1G49290 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.47 | 0.32 | -0.32 | |||
24 | AT3G05820 | invertase H | alkaline/neutral invertase H, Arabidopsis alkaline/neutral invertase H, invertase H |
-0.46 | 0.31 | -0.31 | ||
25 | AT1G13890 | soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
ATSNAP30, soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
0.45 | 0.31 | -0.28 | ||
26 | AT3G53840 | Protein kinase superfamily protein | -0.45 | 0.3 | -0.3 | |||
27 | AT2G11940 | transposable element gene | 0.45 | 0.32 | -0.3 | |||
28 | AT5G41450 | RING/U-box superfamily protein | 0.45 | 0.32 | -0.31 | |||
29 | AT5G43822 | Pentatricopeptide repeat (PPR) superfamily protein | -0.45 | 0.31 | -0.31 | |||
30 | AT1G21970 | Histone superfamily protein | AtLEC1, EMBRYO DEFECTIVE 212, EMBRYO DEFECTIVE 212, LEAFY COTYLEDON 1, NUCLEAR FACTOR Y, SUBUNIT B9 |
0.44 | 0.33 | -0.3 | ||
31 | AT1G48940 | early nodulin-like protein 6 | AtENODL6, early nodulin-like protein 6 |
-0.44 | 0.32 | -0.31 | ||
32 | AT5G24480 | Beta-galactosidase related protein | -0.44 | 0.32 | -0.31 | |||
33 | AT4G15860 | transposable element gene | -0.44 | 0.31 | -0.31 | |||
34 | AT2G28010 | Eukaryotic aspartyl protease family protein | 0.43 | 0.31 | -0.31 | |||
35 | AT3G31460 | transposable element gene | -0.42 | 0.32 | -0.33 | |||
36 | AT4G03800 | transposable element gene | -0.42 | 0.32 | -0.34 | |||
37 | AT2G34990 | RING/U-box superfamily protein | -0.41 | 0.3 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
38 | C0132 | Kaempferol-3-O-rutinoside | - | - | - | 0.65 | 0.43 | -0.43 |