AT1G49260 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G49260
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 5 (TAIR:AT3G14810.1); Has 140 Blast hits to 140 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: mechanosensitive channel of small
conductance-like 5 (TAIR:AT3G14810.1); Has 140 Blast hits
to 140 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.32 -0.32
2 AT2G34315 Avirulence induced gene (AIG1) family protein 0.63 0.33 -0.32
3 AT1G16290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic
transglycosylase-like, catalytic (InterPro:IPR008258); Has
171 Blast hits to 155 proteins in 40 species: Archae - 0;
Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 62 (source: NCBI BLink).		 0.61 0.29 -0.33
4 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 -0.6 0.32 -0.31
5 AT5G22680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has
65 Blast hits to 64 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.33 -0.33
6 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.32 -0.33
7 AT4G04760 Major facilitator superfamily protein 0.57 0.34 -0.33
8 AT3G44070 Glycosyl hydrolase family 35 protein 0.57 0.31 -0.3
9 AT5G18990 Pectin lyase-like superfamily protein 0.56 0.3 -0.33
10 AT2G31760 RING/U-box superfamily protein ARIADNE 10, ARABIDOPSIS ARIADNE 10 0.56 0.33 -0.33
11 AT5G13520 peptidase M1 family protein -0.56 0.3 -0.3
12 ATCG00700 photosystem II reaction center protein N photosystem II reaction center
protein N		 0.54 0.32 -0.32
13 AT1G75360 unknown protein; Has 74 Blast hits to 71 proteins in 15
species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 0.54 0.32 -0.3
14 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.53 0.31 -0.33
15 AT1G60680 NAD(P)-linked oxidoreductase superfamily protein -0.53 0.32 -0.31
16 AT1G48940 early nodulin-like protein 6 AtENODL6, early nodulin-like
protein 6		 0.52 0.32 -0.34
17 AT3G13900 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.52 0.34 -0.3
18 AT2G34790 FAD-binding Berberine family protein EMBRYO SAC DEVELOPMENT ARREST 28,
MATERNAL EFFECT EMBRYO ARREST 23		 -0.52 0.3 -0.32
19 AT5G18070 phosphoglucosamine mutase-related DNA-DAMAGE-REPAIR/TOLERATION 101 -0.52 0.32 -0.33
20 AT5G52400 cytochrome P450, family 715, subfamily A, polypeptide 1 cytochrome P450, family 715,
subfamily A, polypeptide 1		 0.51 0.31 -0.3
21 AT2G23260 UDP-glucosyl transferase 84B1 UDP-glucosyl transferase 84B1 0.51 0.31 -0.31
22 AT1G54290 Translation initiation factor SUI1 family protein 0.51 0.28 -0.29
23 AT3G24715 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.5 0.32 -0.33
24 AT4G13080 xyloglucan endotransglucosylase/hydrolase 1 xyloglucan
endotransglucosylase/hydrolase 1		 0.5 0.3 -0.3
25 AT5G56770 BEST Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.5 0.28 -0.29
26 AT1G68630 PLAC8 family protein 0.5 0.33 -0.33
27 AT5G51290 Diacylglycerol kinase family protein 0.49 0.33 -0.33
28 AT3G42300 transposable element gene 0.49 0.31 -0.32
29 AT5G04650 transposable element gene 0.49 0.3 -0.3
30 AT3G22770 F-box associated ubiquitination effector family protein 0.48 0.31 -0.33
31 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 0.48 0.31 -0.3
32 AT3G30610 transposable element gene 0.48 0.31 -0.32
33 AT3G22340 transposable element gene 0.48 0.31 -0.33
34 AT5G58810 subtilisin-like serine protease, pseudogene, contains
similarity to prepro-cucumisin GI:807698 from (Cucumis
melo); non-consensus acceptor site AA at exon 6; blastp
match of 43% identity and 2.1e-113 P-value to
GP|13325079|gb|AAD02075.3||AF036960 subtilisin-like
protease C1 {Glycine max}		 0.48 0.31 -0.31
35 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.48 0.29 -0.32
36 AT1G42220 transposable element gene 0.48 0.32 -0.32
37 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 -0.47 0.32 -0.32
38 AT1G29230 CBL-interacting protein kinase 18 ATCIPK18, WPL4-LIKE 1,
CBL-interacting protein kinase 18,
SNF1-RELATED PROTEIN KINASE 3.20,
WPL4-LIKE 1		 0.47 0.32 -0.3
39 AT1G01760 adenosine deaminases;RNA binding;RNA binding;adenosine
deaminases		 -0.47 0.32 -0.33
40 AT5G29090 transposable element gene 0.47 0.32 -0.29
41 AT5G36870 glucan synthase-like 9 glucan synthase-like 9, atgsl9,
gsl09, glucan synthase-like 9		 0.47 0.32 -0.32
42 AT1G26780 myb domain protein 117 myb domain protein 117, LATERAL
ORGAN FUSION 1, myb domain protein
117		 0.47 0.32 -0.32
43 AT2G15410 transposable element gene 0.47 0.3 -0.31
44 AT5G62390 BCL-2-associated athanogene 7 BCL-2-associated athanogene 7,
BCL-2-associated athanogene 7		 -0.46 0.32 -0.29
45 AT1G08730 Myosin family protein with Dil domain MYOSIN XI C, XIC 0.46 0.29 -0.32
46 AT1G47610 Transducin/WD40 repeat-like superfamily protein 0.46 0.33 -0.31
47 AT4G08250 GRAS family transcription factor 0.46 0.33 -0.31
48 AT1G63550 Receptor-like protein kinase-related family protein 0.45 0.32 -0.34
49 AT5G13310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G13970.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.45 0.31 -0.3
50 AT1G60400 F-box/RNI-like superfamily protein 0.45 0.32 -0.31
51 AT3G12510 MADS-box family protein -0.45 0.3 -0.34