AT1G49540 : Elongator subunit 2
Query Information
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AGICode AT1G49540
Description elongator protein 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 1 0.32 -0.32
2 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.83 0.29 -0.32
3 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.83 0.33 -0.32
4 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.82 0.34 -0.33
5 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.82 0.29 -0.33
6 AT5G17520 root cap 1 (RCP1) MALTOSE EXCESS 1, ROOT CAP 1 -0.81 0.32 -0.29
7 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 0.81 0.31 -0.32
8 AT1G60850 DNA-directed RNA polymerase family protein AAC42, ATRPAC42 0.8 0.33 -0.32
9 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 0.79 0.32 -0.3
10 AT5G49560 Putative methyltransferase family protein 0.79 0.32 -0.33
11 AT3G07660 Kinase-related protein of unknown function (DUF1296) 0.79 0.31 -0.33
12 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.34 -0.31
13 AT1G14300 ARM repeat superfamily protein 0.78 0.3 -0.32
14 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.78 0.29 -0.33
15 AT5G17820 Peroxidase superfamily protein 0.78 0.3 -0.32
16 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.78 0.35 -0.32
17 AT4G00090 Transducin/WD40 repeat-like superfamily protein 0.77 0.34 -0.3
18 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.77 0.32 -0.29
19 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.77 0.31 -0.32
20 AT2G18330 AAA-type ATPase family protein 0.76 0.32 -0.3
21 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.76 0.33 -0.31
22 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.76 0.3 -0.32
23 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.76 0.3 -0.3
24 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.32 -0.33
25 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.76 0.34 -0.29
26 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 0.75 0.31 -0.32
27 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.75 0.31 -0.32
28 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.75 0.34 -0.33
29 AT5G64420 DNA polymerase V family 0.75 0.32 -0.33
30 AT3G59020 ARM repeat superfamily protein 0.75 0.31 -0.3
31 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.75 0.32 -0.3
32 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.75 0.3 -0.32
33 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.31 -0.33
34 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.74 0.32 -0.31
35 AT3G49860 ADP-ribosylation factor-like A1B ADP-ribosylation factor-like A1B,
ADP-ribosylation factor-like A1B		 0.74 0.32 -0.31
36 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.34 -0.33
37 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 0.73 0.34 -0.33
38 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.73 0.33 -0.29
39 AT4G37000 accelerated cell death 2 (ACD2) ACCELERATED CELL DEATH 2,
ARABIDOPSIS THALIANA RED
CHLOROPHYLL CATABOLITE REDUCTASE		 -0.73 0.32 -0.32
40 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.73 0.32 -0.32
41 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 0.73 0.32 -0.31
42 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.73 0.32 -0.33
43 AT1G04945 HIT-type Zinc finger family protein 0.73 0.32 -0.31
44 AT1G76120 Pseudouridine synthase family protein 0.72 0.3 -0.31
45 AT3G09260 Glycosyl hydrolase superfamily protein BGLU23, LONG ER BODY, PSR3.1,
PYK10		 0.72 0.31 -0.32
46 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.72 0.32 -0.31
47 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 0.72 0.31 -0.3
48 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.31 -0.33
49 AT2G41870 Remorin family protein -0.72 0.31 -0.32
50 AT1G19330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits
to 145 proteins in 43 species: Archae - 0; Bacteria - 0;
Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.72 0.3 -0.31
51 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.72 0.32 -0.33
52 AT4G16060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 42
Blast hits to 42 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 7 (source: NCBI BLink).		 -0.72 0.3 -0.3
53 AT3G24080 KRR1 family protein 0.72 0.32 -0.34
54 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.71 0.31 -0.33
55 AT5G04660 cytochrome P450, family 77, subfamily A, polypeptide 4 cytochrome P450, family 77,
subfamily A, polypeptide 4		 -0.71 0.34 -0.31
56 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92		 0.71 0.34 -0.32
57 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 0.71 0.34 -0.31
58 AT5G47640 nuclear factor Y, subunit B2 nuclear factor Y, subunit B2 -0.71 0.3 -0.32
59 AT3G07750 3'-5'-exoribonuclease family protein 0.71 0.3 -0.31
60 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 0.7 0.29 -0.3
61 AT5G41900 alpha/beta-Hydrolases superfamily protein -0.7 0.32 -0.31
62 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.7 0.3 -0.3
63 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.7 0.32 -0.34
64 AT1G23280 MAK16 protein-related 0.7 0.32 -0.3
65 AT5G57090 Auxin efflux carrier family protein AGRAVITROPIC ROOT, AGRAVITROPIC
ROOT 1, ARABIDOPSIS THALIANA
PIN-FORMED 2, ETHYLENE INSENSITIVE
ROOT 1, MM31, PIN-FORMED 2, WAVY
ROOTS 6		 0.7 0.32 -0.34
66 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.32 -0.33
67 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.7 0.3 -0.3
68 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.7 0.32 -0.31
69 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.7 0.32 -0.31
70 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.7 0.32 -0.32
71 AT5G12840 nuclear factor Y, subunit A1 ATHAP2A, EMBRYO DEFECTIVE 2220,
HAP2A, nuclear factor Y, subunit
A1		 -0.69 0.31 -0.31
72 AT3G14067 Subtilase family protein -0.69 0.32 -0.3
73 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.3 -0.29
74 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 0.69 0.32 -0.34
75 AT5G19520 mechanosensitive channel of small conductance-like 9 ATMSL9, mechanosensitive channel
of small conductance-like 9		 0.69 0.33 -0.33
76 AT2G28450 zinc finger (CCCH-type) family protein 0.69 0.34 -0.32
77 AT2G24500 Zinc finger protein 622 FZF 0.69 0.34 -0.3
78 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.69 0.32 -0.33
79 AT3G18490 Eukaryotic aspartyl protease family protein -0.69 0.33 -0.31
80 AT1G11660 heat shock protein 70 (Hsp 70) family protein 0.69 0.31 -0.32
81 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.35 -0.31
82 AT4G00080 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 unfertilized embryo sac 11 0.69 0.35 -0.31
83 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein 0.69 0.32 -0.31
84 AT3G16360 HPT phosphotransmitter 4 HPT phosphotransmitter 4 -0.69 0.28 -0.33
85 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.68 0.32 -0.31
86 AT2G34700 Pollen Ole e 1 allergen and extensin family protein 0.68 0.31 -0.32
87 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.68 0.3 -0.28
88 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.68 0.31 -0.3
89 AT5G62600 ARM repeat superfamily protein modifier of snc1-1, 14 0.68 0.31 -0.36
90 AT1G14390 Leucine-rich repeat protein kinase family protein 0.68 0.32 -0.33
91 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.68 0.32 -0.31
92 AT5G54370 Late embryogenesis abundant (LEA) protein-related 0.68 0.3 -0.32
93 AT2G39110 Protein kinase superfamily protein 0.68 0.3 -0.31
94 AT5G47540 Mo25 family protein 0.68 0.34 -0.33
95 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.68 0.3 -0.33
96 AT2G44230 Plant protein of unknown function (DUF946) -0.67 0.31 -0.31
97 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.67 0.32 -0.31
98 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.67 0.33 -0.34
99 AT3G29320 Glycosyl transferase, family 35 alpha-glucan phosphorylase 1 -0.67 0.31 -0.31
100 AT1G69390 homologue of bacterial MinE 1 accumulation and replication of
chloroplasts 12, homologue of
bacterial MinE 1, homologue of
bacterial MinE 1		 -0.67 0.31 -0.31
101 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.33
102 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 -0.67 0.33 -0.31
103 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.33 -0.31
104 AT2G27290 Protein of unknown function (DUF1279) -0.67 0.31 -0.32
105 AT1G10650 SBP (S-ribonuclease binding protein) family protein -0.66 0.32 -0.3
106 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.66 0.3 -0.29
107 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.32 -0.32
108 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.66 0.3 -0.31
109 AT5G01930 Glycosyl hydrolase superfamily protein AtMAN6, endo-beta-mannase 6 -0.66 0.32 -0.32
110 AT1G22160 Protein of unknown function (DUF581) -0.66 0.31 -0.3
111 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 -0.65 0.32 -0.29
112 AT3G28840 Protein of unknown function (DUF1216) -0.65 0.31 -0.33
113 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.65 0.29 -0.32
114 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.65 0.33 -0.32
115 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.65 0.32 -0.3
116 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.65 0.32 -0.33
117 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 -0.65 0.33 -0.31
118 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 -0.64 0.34 -0.31
119 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.31
120 AT1G50590 RmlC-like cupins superfamily protein -0.64 0.33 -0.29
121 AT2G19780 Leucine-rich repeat (LRR) family protein -0.64 0.32 -0.29
122 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.64 0.3 -0.3
123 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 -0.64 0.3 -0.31
124 AT3G47490 HNH endonuclease -0.64 0.34 -0.32
125 AT5G11060 KNOTTED1-like homeobox gene 4 KNOTTED1-like homeobox gene 4 -0.63 0.32 -0.34
126 AT5G05090 Homeodomain-like superfamily protein -0.63 0.3 -0.32
127 AT5G62080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.3 -0.31
128 AT3G56050 Protein kinase family protein -0.63 0.33 -0.33
129 AT5G16990 Zinc-binding dehydrogenase family protein -0.63 0.31 -0.31
130 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.63 0.34 -0.32
131 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.63 0.32 -0.3
132 AT1G35310 MLP-like protein 168 MLP-like protein 168 -0.62 0.3 -0.33
133 AT1G79420 Protein of unknown function (DUF620) -0.62 0.32 -0.31
134 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.62 0.31 -0.32
135 AT2G07510 transposable element gene -0.62 0.29 -0.31
136 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.62 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.73 0.46 -0.48 C0146
138 C0158 MST_1480.5 - - - -0.68 0.46 -0.45
139 C0143 Maltitol - - starch degradation II -0.62 0.46 -0.48