AT1G49380 : -
Query Information
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AGICode AT1G49380
Description cytochrome c biogenesis protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49380 cytochrome c biogenesis protein family 1 0.32 -0.32
2 AT3G29185 Domain of unknown function (DUF3598) 0.94 0.3 -0.29
3 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.93 0.35 -0.31
4 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.92 0.34 -0.31
5 AT5G39210 chlororespiratory reduction 7 CHLORORESPIRATORY REDUCTION 7 0.92 0.33 -0.31
6 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.92 0.32 -0.34
7 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.92 0.31 -0.3
8 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.92 0.33 -0.33
9 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or
similar compound as acceptor		 NADH dehydrogenase-like complex N 0.92 0.31 -0.32
10 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.92 0.31 -0.33
11 AT4G17740 Peptidase S41 family protein 0.91 0.29 -0.31
12 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.91 0.32 -0.31
13 AT2G28605 Photosystem II reaction center PsbP family protein 0.91 0.32 -0.3
14 AT2G24060 Translation initiation factor 3 protein 0.91 0.29 -0.31
15 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.32
16 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.9 0.32 -0.32
17 AT3G16250 NDH-dependent cyclic electron flow 1 NDH-dependent cyclic electron flow
1, Photosynthetic NDH subcomplex
B 3		 0.9 0.31 -0.32
18 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.9 0.3 -0.31
19 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein AtPLR1, pyridoxal reductase 1 0.9 0.3 -0.33
20 AT2G41720 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2654 0.9 0.32 -0.33
21 AT5G36170 high chlorophyll fluorescent 109 ATPRFB, high chlorophyll
fluorescent 109		 0.9 0.31 -0.33
22 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.33 -0.32
23 AT4G19100 Protein of unknown function (DUF3464) photosynthesis affected mutant 68 0.9 0.32 -0.31
24 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.9 0.32 -0.29
25 AT1G53520 Chalcone-flavanone isomerase family protein 0.9 0.31 -0.32
26 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.9 0.32 -0.31
27 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.9 0.3 -0.32
28 AT2G18710 SECY homolog 1 SECY homolog 1 0.9 0.32 -0.32
29 AT1G49975 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I,
chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Photosystem I reaction centre subunit N
(InterPro:IPR008796); Has 34 Blast hits to 34 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.3 -0.31
30 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.89 0.33 -0.33
31 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.89 0.34 -0.32
32 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.89 0.32 -0.31
33 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.89 0.34 -0.33
34 AT4G25080 magnesium-protoporphyrin IX methyltransferase magnesium-protoporphyrin IX
methyltransferase		 0.89 0.33 -0.32
35 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.3 -0.31
36 AT4G38970 fructose-bisphosphate aldolase 2 fructose-bisphosphate aldolase 2 0.89 0.33 -0.32
37 AT1G78180 Mitochondrial substrate carrier family protein 0.89 0.34 -0.31
38 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.89 0.31 -0.31
39 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.89 0.32 -0.31
40 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.89 0.33 -0.31
41 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.89 0.33 -0.3
42 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.89 0.29 -0.32
43 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.89 0.32 -0.32
44 AT3G20230 Ribosomal L18p/L5e family protein 0.89 0.32 -0.31
45 AT2G06520 photosystem II subunit X photosystem II subunit X 0.89 0.33 -0.29
46 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.89 0.33 -0.31
47 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.89 0.33 -0.3
48 AT1G14030 Rubisco methyltransferase family protein 0.89 0.32 -0.3
49 AT1G76450 Photosystem II reaction center PsbP family protein 0.88 0.31 -0.32
50 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.88 0.31 -0.32
51 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.88 0.33 -0.33
52 AT1G26230 TCP-1/cpn60 chaperonin family protein chaperonin-60beta4 0.88 0.31 -0.3
53 AT1G31920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.3 -0.32
54 AT3G25660 Amidase family protein 0.88 0.3 -0.31
55 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.88 0.32 -0.34
56 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.3 -0.33
57 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.32 -0.31
58 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.3 -0.31
59 AT5G05740 ethylene-dependent gravitropism-deficient and
yellow-green-like 2		 ATEGY2, ethylene-dependent
gravitropism-deficient and
yellow-green-like 2		 0.88 0.31 -0.31
60 AT3G18680 Amino acid kinase family protein 0.88 0.33 -0.3
61 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.88 0.29 -0.33
62 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.88 0.33 -0.33
63 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.32 -0.31
64 AT2G17240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G24506.1); Has 2795
Blast hits to 943 proteins in 155 species: Archae - 0;
Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153;
Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink).		 0.88 0.31 -0.33
65 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.88 0.32 -0.31
66 AT1G11860 Glycine cleavage T-protein family 0.88 0.29 -0.33
67 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.88 0.31 -0.33
68 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.88 0.32 -0.31
69 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.87 0.33 -0.33
70 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.87 0.3 -0.31
71 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.87 0.32 -0.31
72 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.87 0.32 -0.3
73 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.87 0.3 -0.31
74 AT5G14100 non-intrinsic ABC protein 14 ATP-binding cassette I11,
ARABIDOPSIS THALIANANON-INTRINSIC
ABC PROTEIN 14, non-intrinsic ABC
protein 14		 0.87 0.31 -0.34
75 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.34 -0.3
76 AT5G62840 Phosphoglycerate mutase family protein 0.87 0.28 -0.32
77 AT3G22150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.31 -0.33
78 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.87 0.31 -0.31
79 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.87 0.3 -0.34
80 AT1G14150 PsbQ-like 2 Photosynthetic NDH subcomplex L
2, PsbQ-like 1, PsbQ-like 2		 0.87 0.32 -0.31
81 AT1G17200 Uncharacterised protein family (UPF0497) 0.87 0.3 -0.32
82 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein		 0.87 0.32 -0.3
83 AT4G28080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.34 -0.31
84 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.87 0.31 -0.31
85 AT5G52100 Dihydrodipicolinate reductase, bacterial/plant chlororespiration reduction 1 0.87 0.28 -0.31
86 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.87 0.31 -0.32
87 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.87 0.33 -0.32
88 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.31 -0.29
89 AT1G29330 ER lumen protein retaining receptor family protein ARABIDOPSIS ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ARABIDOPSIS
THALIANA ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ENDOPLASMIC
RETICULUM RETENTION DEFECTIVE 2		 -0.84 0.31 -0.32
90 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.82 0.32 -0.31
91 AT2G30140 UDP-Glycosyltransferase superfamily protein -0.8 0.32 -0.31
92 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.8 0.34 -0.32
93 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 -0.8 0.32 -0.31
94 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.79 0.32 -0.32
95 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.79 0.31 -0.32
96 AT1G25500 Plasma-membrane choline transporter family protein -0.79 0.31 -0.32
97 AT5G06750 Protein phosphatase 2C family protein -0.78 0.29 -0.31
98 AT3G53780 RHOMBOID-like protein 4 RHOMBOID-like protein 4,
RHOMBOID-like protein 4		 -0.77 0.31 -0.32
99 AT1G23040 hydroxyproline-rich glycoprotein family protein -0.77 0.3 -0.32
100 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.77 0.3 -0.33
101 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 -0.76 0.29 -0.32
102 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.76 0.3 -0.3
103 AT5G59510 ROTUNDIFOLIA like 5 DEVIL 18, ROTUNDIFOLIA like 5 -0.76 0.32 -0.34
104 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.33 -0.31
105 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.75 0.3 -0.32
106 AT4G29690 Alkaline-phosphatase-like family protein -0.75 0.32 -0.31
107 AT3G19910 RING/U-box superfamily protein -0.74 0.34 -0.31
108 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.74 0.32 -0.33
109 AT5G65020 annexin 2 annexin 2 -0.74 0.32 -0.3
110 AT1G52140 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits
to 114 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0204 Phosphatidylglycerol-34:2 - Phosphatidylglycerol-34:2 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.89 0.45 -0.46 C0204
112 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.87 0.47 -0.47 C0133