AT1G49250 : -
Query Information
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AGICode AT1G49250
Description ATP-dependent DNA ligase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49250 ATP-dependent DNA ligase 1 0.32 -0.29
2 AT3G42100 transposable element gene 0.76 0.33 -0.34
3 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.76 0.33 -0.3
4 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 -0.76 0.31 -0.33
5 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.74 0.32 -0.3
6 AT3G12910 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.74 0.32 -0.33
7 AT1G54280 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.71 0.32 -0.31
8 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.71 0.32 -0.32
9 AT2G10010 transposable element gene 0.71 0.31 -0.3
10 AT4G07940 Protein of unknown function (DUF3245) 0.71 0.31 -0.31
11 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.7 0.33 -0.32
12 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.32 -0.32
13 AT5G37420 Family of unknown function (DUF577) 0.7 0.35 -0.3
14 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.7 0.29 -0.31
15 AT4G03640 transposable element gene 0.69 0.32 -0.31
16 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.69 0.31 -0.32
17 AT2G29800 Galactose oxidase/kelch repeat superfamily protein 0.69 0.35 -0.31
18 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.69 0.32 -0.32
19 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.32 -0.33
20 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.69 0.33 -0.31
21 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.68 0.34 -0.3
22 AT5G64690 neurofilament triplet H protein-related 0.68 0.32 -0.31
23 AT5G38260 Protein kinase superfamily protein 0.68 0.32 -0.31
24 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 0.68 0.31 -0.33
25 AT3G43120 SAUR-like auxin-responsive protein family 0.68 0.32 -0.3
26 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.32
27 AT5G14890 NHL domain-containing protein -0.67 0.33 -0.3
28 AT1G36110 transposable element gene 0.67 0.3 -0.3
29 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.66 0.32 -0.32
30 AT4G30660 Low temperature and salt responsive protein family -0.66 0.33 -0.34
31 AT1G42460 transposable element gene 0.66 0.31 -0.3
32 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.35 -0.32
33 AT5G01310 APRATAXIN-like APRATAXIN-like 0.66 0.31 -0.33
34 AT1G47350 F-box associated ubiquitination effector family protein -0.65 0.31 -0.32
35 AT4G29200 Beta-galactosidase related protein -0.65 0.31 -0.33
36 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.31
37 AT2G22950 Cation transporter/ E1-E2 ATPase family protein auto-regulated Ca2+-ATPase 7 -0.65 0.32 -0.31
38 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 0.64 0.31 -0.3
39 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.64 0.31 -0.33
40 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.32
41 AT4G07920 transposable element gene -0.64 0.31 -0.31
42 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.63 0.31 -0.32
43 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.3 -0.33
44 AT4G26640 WRKY family transcription factor family protein AtWRKY20, WRKY20 -0.63 0.33 -0.33
45 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.3
46 AT3G05390 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF248, methyltransferase putative
(InterPro:IPR004159); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT4G01240.1);
Has 507 Blast hits to 498 proteins in 33 species: Archae -
4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.63 0.32 -0.3
47 AT5G18910 Protein kinase superfamily protein 0.63 0.33 -0.31
48 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.63 0.33 -0.32
49 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.63 0.31 -0.33
50 AT4G05640 transposable element gene -0.63 0.31 -0.33
51 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.63 0.32 -0.31
52 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.62 0.32 -0.31
53 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.62 0.33 -0.32
54 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein -0.62 0.33 -0.31
55 AT1G53940 GDSL-motif lipase 2 GDSL-motif lipase 2 0.62 0.31 -0.31
56 AT5G57940 cyclic nucleotide gated channel 5 cyclic nucleotide gated channel 5,
cyclic nucleotide gated channel 5		 0.62 0.33 -0.31
57 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 0.62 0.32 -0.31
58 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.62 0.31 -0.32
59 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 0.62 0.32 -0.3
60 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.32
61 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 0.61 0.31 -0.32
62 AT4G17690 Peroxidase superfamily protein -0.61 0.31 -0.34
63 AT5G11850 Protein kinase superfamily protein 0.61 0.33 -0.31
64 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.61 0.3 -0.3
65 AT4G05550 transposable element gene -0.61 0.31 -0.31
66 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.61 0.33 -0.32
67 AT5G38950 RmlC-like cupins superfamily protein 0.61 0.32 -0.31
68 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.6 0.31 -0.3
69 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.35 -0.32
70 AT1G63200 Cystatin/monellin superfamily protein 0.6 0.31 -0.33
71 AT1G56610 Protein with RNI-like/FBD-like domains -0.6 0.32 -0.31
72 AT3G28830 Protein of unknown function (DUF1216) -0.6 0.31 -0.3
73 AT4G02190 Cysteine/Histidine-rich C1 domain family protein -0.6 0.28 -0.33
74 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 0.6 0.31 -0.31
75 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 -0.6 0.33 -0.33
76 AT2G11150 transposable element gene 0.6 0.31 -0.32
77 AT1G67000 Protein kinase superfamily protein 0.6 0.32 -0.3
78 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.33 -0.32
79 AT5G46540 P-glycoprotein 7 ATP-binding cassette B7,
P-glycoprotein 7		 0.6 0.28 -0.33
80 AT3G56890 F-box associated ubiquitination effector family protein 0.6 0.33 -0.33
81 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.6 0.33 -0.32
82 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 0.6 0.31 -0.32
83 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.6 0.32 -0.34
84 AT1G49490 Leucine-rich repeat (LRR) family protein 0.59 0.33 -0.3
85 AT2G04000 transposable element gene -0.59 0.32 -0.29
86 AT2G17000 Mechanosensitive ion channel family protein 0.59 0.3 -0.33
87 AT5G24110 WRKY DNA-binding protein 30 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 30, WRKY
DNA-binding protein 30		 -0.59 0.32 -0.33
88 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.59 0.32 -0.32
89 AT3G42440 transposable element gene 0.59 0.31 -0.29
90 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.59 0.32 -0.31
91 AT5G59260 Concanavalin A-like lectin protein kinase family protein -0.59 0.3 -0.32
92 AT3G03510 Phototropic-responsive NPH3 family protein 0.59 0.3 -0.32
93 AT4G28670 Protein kinase family protein with domain of unknown
function (DUF26)		 -0.59 0.31 -0.32
94 AT2G07630 transposable element gene 0.59 0.3 -0.32
95 AT4G05150 Octicosapeptide/Phox/Bem1p family protein -0.59 0.31 -0.32
96 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.59 0.32 -0.32
97 AT3G29650 transposable element gene -0.59 0.3 -0.32
98 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 -0.58 0.32 -0.32
99 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.31 -0.32
100 AT2G36090 F-box family protein -0.58 0.33 -0.32
101 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.58 0.31 -0.32
102 AT5G25750 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.3 -0.29
103 AT4G22430 F-box family protein -0.57 0.3 -0.32
104 AT2G26940 C2H2-type zinc finger family protein -0.57 0.32 -0.3
105 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.57 0.32 -0.31
106 AT1G14340 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.32 -0.3
107 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 -0.57 0.32 -0.32
108 AT1G61620 phosphoinositide binding -0.57 0.29 -0.3
109 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 -0.57 0.31 -0.31
110 AT2G43270 F-box and associated interaction domains-containing protein -0.57 0.31 -0.33
111 AT2G14690 Glycosyl hydrolase superfamily protein -0.57 0.33 -0.31
112 AT1G75160 Protein of unknown function (DUF620) -0.56 0.33 -0.29
113 AT2G14380 transposable element gene -0.56 0.31 -0.3
114 AT3G50120 Plant protein of unknown function (DUF247) -0.56 0.31 -0.29
115 AT1G72060 serine-type endopeptidase inhibitors -0.55 0.33 -0.31
116 AT2G23900 Pectin lyase-like superfamily protein -0.55 0.29 -0.33
117 AT2G33000 ubiquitin-associated (UBA)/TS-N domain-containing
protein-related		 -0.55 0.31 -0.3
118 AT3G32090 WRKY family transcription factor -0.55 0.32 -0.32
119 AT5G48330 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 2 -0.55 0.32 -0.35
120 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.32 -0.3
121 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 -0.55 0.31 -0.29
122 AT3G02270 Trimeric LpxA-like enzyme -0.55 0.31 -0.31
123 AT3G29732 transposable element gene -0.55 0.29 -0.31
124 AT3G22060 Receptor-like protein kinase-related family protein -0.55 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0138 Linarin - - - 0.71 0.42 -0.41
126 C0143 Maltitol - - starch degradation II -0.66 0.46 -0.44