AGICode | AT1G49450 |
Description | Transducin/WD40 repeat-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G49450 | Transducin/WD40 repeat-like superfamily protein | 1 | 0.33 | -0.31 | |||
2 | AT1G76990 | ACT domain repeat 3 | ACT domain repeat 3 | -0.74 | 0.32 | -0.31 | ||
3 | AT3G14850 | TRICHOME BIREFRINGENCE-LIKE 41 | TRICHOME BIREFRINGENCE-LIKE 41 | -0.72 | 0.35 | -0.34 | ||
4 | AT5G23670 | long chain base2 | long chain base2 | -0.72 | 0.34 | -0.3 | ||
5 | AT3G01120 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
AtCGS1, A. thaliana cystathionine gamma-synthetase 1, CYSTATHIONINE GAMMA-SYNTHASE, CYSTATHIONINE GAMMA-SYNTHASE 1, METHIONINE OVERACCUMULATION 1 |
-0.72 | 0.3 | -0.33 | ||
6 | AT1G05430 | unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.32 | -0.32 | |||
7 | AT3G14000 | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein |
ATBRXL2, BRX-LIKE2 | 0.7 | 0.3 | -0.31 | ||
8 | AT3G56840 | FAD-dependent oxidoreductase family protein | -0.69 | 0.33 | -0.29 | |||
9 | AT5G37500 | gated outwardly-rectifying K+ channel | gated outwardly-rectifying K+ channel |
0.69 | 0.33 | -0.3 | ||
10 | AT5G47435 | formyltetrahydrofolate deformylase, putative | -0.69 | 0.31 | -0.3 | |||
11 | AT2G38310 | PYR1-like 4 | PYR1-like 4, regulatory components of ABA receptor 10 |
-0.69 | 0.29 | -0.34 | ||
12 | AT5G01990 | Auxin efflux carrier family protein | 0.68 | 0.31 | -0.34 | |||
13 | AT1G04220 | 3-ketoacyl-CoA synthase 2 | 3-ketoacyl-CoA synthase 2 | 0.68 | 0.33 | -0.32 | ||
14 | AT4G22720 | Actin-like ATPase superfamily protein | -0.68 | 0.32 | -0.3 | |||
15 | AT1G05810 | RAB GTPase homolog A5E | ARA, ARA-1, ATRAB11D, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E, RAB GTPase homolog A5E |
-0.68 | 0.31 | -0.29 | ||
16 | AT2G30060 | Pleckstrin homology (PH) domain superfamily protein | -0.68 | 0.31 | -0.3 | |||
17 | AT1G56350 | Peptide chain release factor 2 | -0.68 | 0.32 | -0.29 | |||
18 | AT5G06770 | KH domain-containing protein / zinc finger (CCCH type) family protein |
-0.68 | 0.34 | -0.32 | |||
19 | AT5G50360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.3 | -0.32 | |||
20 | AT1G18640 | 3-phosphoserine phosphatase | 3-phosphoserine phosphatase | -0.67 | 0.33 | -0.33 | ||
21 | AT2G21290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.34 | -0.32 | |||
22 | AT5G11110 | sucrose phosphate synthase 2F | sucrose phosphate synthase 2F, KAONASHI 2, SUCROSE PHOSPHATE SYNTHASE 1, sucrose phosphate synthase 2F, sucrose-phosphate synthase A2 |
0.67 | 0.32 | -0.31 | ||
23 | AT2G21195 | unknown protein; Has 28 Blast hits to 28 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.31 | -0.33 | |||
24 | AT3G29575 | ABI five binding protein 3 | ABI five binding protein 3 | 0.67 | 0.32 | -0.31 | ||
25 | AT1G07140 | Pleckstrin homology (PH) domain superfamily protein | SIRANBP | -0.66 | 0.31 | -0.32 | ||
26 | AT3G17390 | S-adenosylmethionine synthetase family protein | METHIONINE ADENOSYLTRANSFERASE 4, METHIONINE OVER-ACCUMULATOR 3, S-ADENOSYLMETHIONINE SYNTHETASE 3 |
-0.66 | 0.33 | -0.32 | ||
27 | AT2G43640 | Signal recognition particle, SRP9/SRP14 subunit | -0.66 | 0.3 | -0.33 | |||
28 | AT4G19410 | Pectinacetylesterase family protein | -0.66 | 0.32 | -0.3 | |||
29 | AT5G61590 | Integrase-type DNA-binding superfamily protein | -0.65 | 0.32 | -0.32 | |||
30 | AT1G18600 | RHOMBOID-like protein 12 | ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12, RHOMBOID-like protein 12 |
-0.65 | 0.33 | -0.31 | ||
31 | AT1G75960 | AMP-dependent synthetase and ligase family protein | -0.65 | 0.32 | -0.3 | |||
32 | AT5G59160 | type one serine/threonine protein phosphatase 2 | PROTOPORPHYRINOGEN OXIDASE, type one serine/threonine protein phosphatase 2 |
-0.65 | 0.32 | -0.32 | ||
33 | AT5G39390 | Leucine-rich repeat protein kinase family protein | -0.65 | 0.33 | -0.27 | |||
34 | AT3G51600 | lipid transfer protein 5 | lipid transfer protein 5 | -0.65 | 0.32 | -0.32 | ||
35 | AT4G14965 | membrane-associated progesterone binding protein 4 | membrane-associated progesterone binding protein 4, membrane-associated progesterone binding protein 4 |
-0.65 | 0.29 | -0.31 | ||
36 | AT5G56280 | COP9 signalosome subunit 6A | COP9 signalosome subunit 6A | -0.65 | 0.3 | -0.32 | ||
37 | AT5G57000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.64 | 0.3 | -0.33 | |||
38 | AT5G13580 | ABC-2 type transporter family protein | ATP-binding cassette G6 | 0.64 | 0.35 | -0.31 | ||
39 | AT2G35900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.31 | -0.32 | |||
40 | AT4G14100 | transferases, transferring glycosyl groups | -0.63 | 0.31 | -0.34 | |||
41 | AT5G05610 | alfin-like 1 | alfin-like 1 | -0.63 | 0.31 | -0.33 | ||
42 | AT1G12100 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.63 | 0.29 | -0.3 | |||
43 | AT2G31790 | UDP-Glycosyltransferase superfamily protein | -0.63 | 0.32 | -0.31 | |||
44 | AT5G53880 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.31 | -0.27 | |||
45 | AT1G14730 | Cytochrome b561/ferric reductase transmembrane protein family |
0.63 | 0.31 | -0.31 | |||
46 | AT3G46820 | type one serine/threonine protein phosphatase 5 | type one serine/threonine protein phosphatase 5 |
-0.63 | 0.32 | -0.32 | ||
47 | AT5G53160 | regulatory components of ABA receptor 3 | PYR1-like 8, regulatory components of ABA receptor 3 |
-0.63 | 0.32 | -0.33 | ||
48 | AT2G30520 | Phototropic-responsive NPH3 family protein | ROOT PHOTOTROPISM 2 | -0.63 | 0.32 | -0.32 | ||
49 | AT4G27730 | oligopeptide transporter 1 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 6, oligopeptide transporter 1 |
-0.62 | 0.32 | -0.29 | ||
50 | AT1G27310 | nuclear transport factor 2A | nuclear transport factor 2A | -0.62 | 0.33 | -0.33 | ||
51 | AT3G58990 | isopropylmalate isomerase 1 | isopropylmalate isomerase 1 | -0.62 | 0.31 | -0.3 | ||
52 | AT4G17890 | ARF-GAP domain 8 | ARF-GAP domain 8 | -0.62 | 0.34 | -0.33 | ||
53 | AT1G50170 | sirohydrochlorin ferrochelatase B | sirohydrochlorin ferrochelatase B, sirohydrochlorin ferrochelatase B |
-0.62 | 0.32 | -0.31 | ||
54 | AT1G26160 | Metal-dependent phosphohydrolase | -0.62 | 0.34 | -0.31 | |||
55 | AT5G23870 | Pectinacetylesterase family protein | -0.62 | 0.31 | -0.32 | |||
56 | AT2G47320 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.62 | 0.34 | -0.31 | |||
57 | AT4G13430 | isopropyl malate isomerase large subunit 1 | ATLEUC1, isopropyl malate isomerase large subunit 1 |
-0.62 | 0.33 | -0.33 | ||
58 | AT5G18830 | squamosa promoter binding protein-like 7 | SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7, squamosa promoter binding protein-like 7 |
0.62 | 0.31 | -0.33 | ||
59 | AT1G55740 | seed imbibition 1 | seed imbibition 1, raffinose synthase 1, seed imbibition 1 |
0.62 | 0.29 | -0.33 | ||
60 | AT5G52190 | Sugar isomerase (SIS) family protein | -0.62 | 0.31 | -0.29 | |||
61 | AT2G33600 | NAD(P)-binding Rossmann-fold superfamily protein | -0.61 | 0.33 | -0.31 | |||
62 | AT4G22830 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). |
-0.61 | 0.3 | -0.33 | |||
63 | AT4G13410 | Nucleotide-diphospho-sugar transferases superfamily protein | ATCSLA15, CELLULOSE SYNTHASE LIKE A15 |
-0.61 | 0.3 | -0.31 | ||
64 | AT5G22370 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
EMBRYO DEFECTIVE 1705, QUATRE-QUART 1 |
-0.61 | 0.31 | -0.31 | ||
65 | AT1G60190 | ARM repeat superfamily protein | AtPUB19, plant U-box 19 | 0.61 | 0.33 | -0.31 | ||
66 | AT5G41040 | HXXXD-type acyl-transferase family protein | 0.61 | 0.33 | -0.3 | |||
67 | AT1G18350 | MAP kinase kinase 7 | MAP kinase kinase 7, BUSHY AND DWARF 1, MAP kinase kinase 7, MAP KINASE KINASE7 |
-0.61 | 0.33 | -0.31 | ||
68 | AT1G60870 | maternal effect embryo arrest 9 | maternal effect embryo arrest 9 | -0.61 | 0.33 | -0.31 | ||
69 | AT2G31680 | RAB GTPase homolog A5D | RAB GTPase homolog A5D, RAB GTPase homolog A5D |
-0.61 | 0.3 | -0.33 | ||
70 | AT3G26630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.31 | -0.31 | |||
71 | AT5G48580 | FK506- and rapamycin-binding protein 15 kD-2 | FK506- and rapamycin-binding protein 15 kD-2 |
-0.61 | 0.32 | -0.3 | ||
72 | AT1G74090 | desulfo-glucosinolate sulfotransferase 18 | DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18, ARABIDOPSIS SULFOTRANSFERASE 5B, desulfo-glucosinolate sulfotransferase 18 |
-0.6 | 0.32 | -0.32 | ||
73 | AT3G53650 | Histone superfamily protein | -0.6 | 0.33 | -0.32 | |||
74 | AT5G46450 | Disease resistance protein (TIR-NBS-LRR class) family | -0.6 | 0.33 | -0.32 | |||
75 | AT2G24765 | ADP-ribosylation factor 3 | ADP-ribosylation factor 3, ARF-LIKE 1, ARF-LIKE 1 |
-0.6 | 0.34 | -0.31 | ||
76 | AT5G08530 | 51 kDa subunit of complex I | 51 kDa subunit of complex I | -0.6 | 0.3 | -0.31 | ||
77 | AT1G74910 | ADP-glucose pyrophosphorylase family protein | -0.6 | 0.31 | -0.33 | |||
78 | AT5G17560 | BolA-like family protein | -0.6 | 0.35 | -0.31 | |||
79 | AT3G55960 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.6 | 0.32 | -0.33 | |||
80 | AT4G35000 | ascorbate peroxidase 3 | ascorbate peroxidase 3 | -0.6 | 0.33 | -0.31 | ||
81 | AT1G67350 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.33 | -0.33 | |||
82 | AT2G29190 | pumilio 2 | pumilio 2, pumilio 2 | 0.6 | 0.33 | -0.31 | ||
83 | AT4G18460 | D-Tyr-tRNA(Tyr) deacylase family protein | -0.6 | 0.31 | -0.28 | |||
84 | AT2G12400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.6 | 0.32 | -0.31 | |||
85 | AT3G57330 | autoinhibited Ca2+-ATPase 11 | autoinhibited Ca2+-ATPase 11 | -0.6 | 0.3 | -0.32 | ||
86 | AT1G27920 | microtubule-associated protein 65-8 | microtubule-associated protein 65-8 |
0.59 | 0.31 | -0.3 | ||
87 | AT2G41210 | phosphatidylinositol- 4-phosphate 5-kinase 5 | phosphatidylinositol- 4-phosphate 5-kinase 5 |
0.59 | 0.31 | -0.32 | ||
88 | AT4G14000 | Putative methyltransferase family protein | -0.59 | 0.3 | -0.32 | |||
89 | AT4G14420 | HR-like lesion-inducing protein-related | -0.59 | 0.31 | -0.3 | |||
90 | AT4G09720 | RAB GTPase homolog G3A | RAB GTPase homolog G3A, RAB GTPase homolog G3A |
-0.59 | 0.32 | -0.33 | ||
91 | AT1G51540 | Galactose oxidase/kelch repeat superfamily protein | -0.59 | 0.31 | -0.33 | |||
92 | AT1G62380 | ACC oxidase 2 | ACC oxidase 2, ATACO2 | -0.59 | 0.31 | -0.29 | ||
93 | AT4G38920 | vacuolar-type H(+)-ATPase C3 | vacuolar-type H(+)-ATPase C3, AVA-P3, vacuolar-type H(+)-ATPase C3 |
-0.59 | 0.31 | -0.32 | ||
94 | AT5G20050 | Protein kinase superfamily protein | -0.59 | 0.31 | -0.31 | |||
95 | AT1G11650 | RNA-binding (RRM/RBD/RNP motifs) family protein | ATRBP45B, RBP45B | -0.59 | 0.31 | -0.32 | ||
96 | AT4G39920 | C-CAP/cofactor C-like domain-containing protein | PORCINO, TUBULIN-FOLDING COFACTOR C |
-0.59 | 0.3 | -0.31 | ||
97 | AT1G58100 | TCP family transcription factor | TCP domain protein 8 | -0.59 | 0.33 | -0.32 | ||
98 | AT5G58700 | phosphatidylinositol-speciwc phospholipase C4 | ATPLC4, phosphatidylinositol-speciwc phospholipase C4 |
0.58 | 0.34 | -0.31 | ||
99 | AT5G57100 | Nucleotide/sugar transporter family protein | 0.58 | 0.32 | -0.3 | |||
100 | AT2G22590 | UDP-Glycosyltransferase superfamily protein | 0.58 | 0.29 | -0.33 | |||
101 | AT5G09530 | hydroxyproline-rich glycoprotein family protein | Pro-Glu-Leu|Ile|Val-Pro-Lys 1, proline-rich protein 10 |
0.57 | 0.33 | -0.36 | ||
102 | AT5G44180 | Homeodomain-like transcriptional regulator | 0.54 | 0.32 | -0.32 | |||
103 | AT1G48130 | 1-cysteine peroxiredoxin 1 | 1-cysteine peroxiredoxin 1, 1-cysteine peroxiredoxin 1 |
0.54 | 0.3 | -0.34 | ||
104 | AT5G55400 | Actin binding Calponin homology (CH) domain-containing protein |
0.54 | 0.31 | -0.33 | |||
105 | AT2G27630 | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.54 | 0.32 | -0.32 | |||
106 | AT3G24660 | transmembrane kinase-like 1 | transmembrane kinase-like 1 | 0.54 | 0.31 | -0.3 | ||
107 | AT3G22830 | heat shock transcription factor A6B | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A6B, heat shock transcription factor A6B |
0.54 | 0.31 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
108 | C0266 | Xylose | D-Xylose | D-Xylose | xylose degradation I | 0.81 | 0.44 | -0.44 | ||
109 | C0123 | Isoleucine | D,L-Isoleucine | L-Isoleucine | tRNA charging, isoleucine biosynthesis I (from threonine), jasmonoyl-amino acid conjugates biosynthesis I, isoleucine degradation I |
0.75 | 0.43 | -0.47 | ||
110 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.74 | 0.44 | -0.44 | ||
111 | C0267 | Zeatin | cis-Zeatin | cis-Zeatin | cytokinins-O-glucoside biosynthesis, cytokinins degradation, cytokinins 7-N-glucoside biosynthesis, cytokinins 9-N-glucoside biosynthesis, cis-zeatin biosynthesis |
0.68 | 0.46 | -0.45 | ||
112 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.64 | 0.46 | -0.45 |