AT1G50350 : -
Query Information
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AGICode AT1G50350
Description BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G50350 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.31 -0.31
2 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 0.69 0.32 -0.32
3 AT5G41860 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.33 -0.32
4 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.3 -0.31
5 AT4G15200 formin 3 formin 3, formin 3 0.6 0.31 -0.31
6 AT3G05790 lon protease 4 lon protease 4 -0.6 0.32 -0.32
7 AT3G23050 indole-3-acetic acid 7 AUXIN RESISTANT 2, indole-3-acetic
acid 7		 0.6 0.29 -0.31
8 AT4G28380 Leucine-rich repeat (LRR) family protein 0.59 0.33 -0.33
9 AT3G03840 SAUR-like auxin-responsive protein family 0.59 0.34 -0.32
10 AT5G23960 terpene synthase 21 ATTPS21, terpene synthase 21 0.59 0.32 -0.31
11 AT4G35740 DEAD/DEAH box RNA helicase family protein A. THALIANA RECQ HELICASE 3,
RecQl3		 0.58 0.29 -0.32
12 AT1G65630 DegP protease 3 DegP protease 3 0.57 0.31 -0.32
13 AT1G53930 Ubiquitin-like superfamily protein 0.57 0.32 -0.31
14 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 0.56 0.29 -0.33
15 AT4G21323 Subtilase family protein -0.56 0.33 -0.33
16 AT3G60410 Protein of unknown function (DUF1639) 0.56 0.32 -0.3
17 AT5G28810 Domain of unknown function (DUF1985) 0.56 0.32 -0.3
18 AT1G32270 syntaxin, putative ATSYP24, SYNTAXIN 24 0.55 0.32 -0.3
19 AT3G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G05180.1); Has 15699 Blast
hits to 11378 proteins in 1134 species: Archae - 391;
Bacteria - 2054; Metazoa - 6851; Fungi - 1354; Plants -
1096; Viruses - 119; Other Eukaryotes - 3834 (source: NCBI
BLink).		 0.55 0.31 -0.31
20 AT1G29490 SAUR-like auxin-responsive protein family 0.54 0.3 -0.28
21 AT2G46375 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.3 -0.33
22 AT4G28900 transposable element gene 0.54 0.31 -0.3
23 AT5G52490 Fibrillarin family protein 0.54 0.31 -0.32
24 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 -0.54 0.3 -0.32
25 AT5G22900 cation/H+ exchanger 3 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 3, cation/H+ exchanger 3		 0.53 0.34 -0.3
26 AT4G14550 indole-3-acetic acid inducible 14 indole-3-acetic acid inducible 14,
SOLITARY ROOT		 0.53 0.32 -0.31
27 AT5G28210 mRNA capping enzyme family protein 0.53 0.31 -0.33
28 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 0.53 0.32 -0.29
29 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.52 0.31 -0.3
30 AT5G51310 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.52 0.32 -0.32
31 AT1G13680 PLC-like phosphodiesterases superfamily protein -0.52 0.32 -0.31
32 AT5G52140 RING/U-box superfamily protein 0.52 0.32 -0.31
33 AT2G22180 hydroxyproline-rich glycoprotein family protein 0.51 0.31 -0.31
34 AT3G09240 Protein kinase protein with tetratricopeptide repeat domain 0.51 0.3 -0.31
35 AT2G36020 HVA22-like protein J HVA22-like protein J 0.51 0.35 -0.33
36 AT1G19410 FBD / Leucine Rich Repeat domains containing protein 0.51 0.33 -0.3
37 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.51 0.33 -0.29
38 AT3G16160 Tesmin/TSO1-like CXC domain-containing protein 0.5 0.32 -0.3
39 AT1G51900 Regulator of Vps4 activity in the MVB pathway protein 0.5 0.32 -0.31
40 AT2G18380 GATA transcription factor 20 GATA transcription factor 20,
hanaba taranu like 1		 0.5 0.32 -0.35
41 AT2G16840 transposable element gene 0.49 0.33 -0.33
42 AT3G42220 transposable element gene 0.49 0.33 -0.33
43 AT3G53770 late embryogenesis abundant 3 (LEA3) family protein 0.49 0.33 -0.32
44 AT4G14780 Protein kinase superfamily protein 0.49 0.32 -0.32
45 AT1G34100 choline kinase, putative, similar to choline kinase
(GmCK2p) GI:1438881 from (Glycine max); contains Pfam
profile PF01633: Choline/ethanolamine kinase; could not
find a suitable start codon; this may be a pseudogene, a
transposon insertion is found immediately upstream.		 0.49 0.32 -0.32
46 AT4G21420 transposable element gene -0.49 0.33 -0.33
47 AT3G32270 transposable element gene 0.49 0.32 -0.29
48 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein -0.49 0.32 -0.3
49 AT5G59370 actin 4 actin 4 0.49 0.32 -0.32
50 AT1G13890 soluble N-ethylmaleimide-sensitive factor adaptor protein
30		 ATSNAP30, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 30		 -0.48 0.32 -0.3
51 AT3G04360 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.48 0.31 -0.3
52 AT2G17210 Tetratricopeptide repeat (TPR)-like superfamily protein -0.46 0.32 -0.32