AT1G34240 : -
Query Information
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AGICode AT1G34240
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G34240 transposable element gene 1 0.3 -0.31
2 AT2G43200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.31 -0.32
3 AT5G66340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.68 0.33 -0.33
4 AT1G70040 Protein of unknown function (DUF1163) -0.67 0.32 -0.31
5 AT5G60570 Galactose oxidase/kelch repeat superfamily protein -0.66 0.32 -0.34
6 AT3G01130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.3 -0.32
7 AT2G15640 F-box family protein 0.65 0.32 -0.32
8 AT4G15250 B-box type zinc finger protein with CCT domain 0.65 0.34 -0.31
9 AT1G49015 DPP6 N-terminal domain-like protein -0.64 0.33 -0.33
10 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.3 -0.31
11 AT4G32220 transposable element gene -0.64 0.32 -0.34
12 AT2G05960 transposable element gene -0.63 0.31 -0.33
13 AT1G17390 transposable element gene 0.63 0.33 -0.31
14 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 -0.63 0.32 -0.32
15 AT1G61430 S-locus lectin protein kinase family protein -0.62 0.3 -0.32
16 AT3G05280 Integral membrane Yip1 family protein -0.62 0.32 -0.32
17 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 -0.61 0.32 -0.3
18 AT1G16705 p300/CBP acetyltransferase-related protein-related 0.61 0.28 -0.33
19 AT3G30843 transposable element gene -0.61 0.31 -0.3
20 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.61 0.31 -0.33
21 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.6 0.31 -0.31
22 AT4G40070 RING/U-box superfamily protein -0.6 0.32 -0.34
23 AT5G45370 nodulin MtN21 /EamA-like transporter family protein 0.6 0.31 -0.33
24 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.6 0.32 -0.3
25 AT2G02140 low-molecular-weight cysteine-rich 72 low-molecular-weight cysteine-rich
72, PDF2.6		 -0.6 0.32 -0.33
26 AT5G60070 ankyrin repeat family protein 0.6 0.35 -0.32
27 AT4G28850 xyloglucan endotransglucosylase/hydrolase 26 ATXTH26, xyloglucan
endotransglucosylase/hydrolase 26		 -0.59 0.32 -0.31
28 AT5G28240 transposable element gene -0.59 0.32 -0.34
29 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.32 -0.3
30 AT2G13020 transposable element gene -0.59 0.31 -0.32
31 AT3G14490 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.59 0.32 -0.31
32 AT5G24710 Transducin/WD40 repeat-like superfamily protein -0.59 0.34 -0.31
33 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.59 0.31 -0.34
34 AT4G20740 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3131 -0.58 0.31 -0.33
35 AT2G45460 SMAD/FHA domain-containing protein -0.58 0.31 -0.29
36 AT1G66210 Subtilisin-like serine endopeptidase family protein -0.58 0.33 -0.33
37 AT5G01690 cation/H+ exchanger 27 ARABIDOPSIS THALIANA
CATION/HYDROGEN EXCHANGER 27,
cation/H+ exchanger 27		 -0.58 0.33 -0.28
38 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.31
39 AT2G39720 RING-H2 finger C2A RING-H2 finger C2A -0.58 0.32 -0.32
40 AT1G34530 transposable element gene 0.57 0.3 -0.31
41 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 -0.57 0.32 -0.31
42 AT2G31500 calcium-dependent protein kinase 24 calcium-dependent protein kinase
24		 0.57 0.33 -0.33
43 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 0.57 0.33 -0.29
44 AT4G05300 transposable element gene -0.57 0.33 -0.32
45 AT1G69080 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.57 0.31 -0.29
46 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE -0.57 0.31 -0.31
47 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.57 0.33 -0.29
48 AT1G29820 Magnesium transporter CorA-like family protein -0.56 0.3 -0.29
49 AT1G59670 glutathione S-transferase TAU 15 glutathione S-transferase TAU 15,
glutathione S-transferase TAU 15		 0.56 0.33 -0.33
50 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.33 -0.32
51 AT4G13480 myb domain protein 79 myb domain protein 79, myb domain
protein 79		 -0.56 0.32 -0.31
52 AT4G19780 transposable element gene 0.56 0.31 -0.32
53 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 -0.56 0.32 -0.29
54 AT5G40680 Galactose oxidase/kelch repeat superfamily protein -0.56 0.31 -0.31
55 AT1G50970 Membrane trafficking VPS53 family protein 0.56 0.32 -0.33
56 AT1G63290 Aldolase-type TIM barrel family protein 0.56 0.35 -0.32
57 AT1G05360 BEST Arabidopsis thaliana protein match is: SNARE
associated Golgi protein family (TAIR:AT4G14950.1); Has 332
Blast hits to 326 proteins in 115 species: Archae - 0;
Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74;
Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).		 Killing Me Slowly 2 0.55 0.33 -0.31
58 AT2G06310 transposable element gene 0.55 0.32 -0.31
59 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.55 0.31 -0.31
60 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.33 -0.31
61 AT5G65180 ENTH/VHS family protein -0.55 0.32 -0.29
62 AT3G02400 SMAD/FHA domain-containing protein -0.55 0.31 -0.3
63 AT1G70630 Nucleotide-diphospho-sugar transferase family protein -0.55 0.32 -0.34
64 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain -0.55 0.34 -0.32
65 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 -0.55 0.32 -0.3
66 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 -0.55 0.31 -0.33
67 AT5G65390 arabinogalactan protein 7 arabinogalactan protein 7 -0.54 0.31 -0.32
68 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.54 0.29 -0.32
69 AT4G27330 sporocyteless (SPL) NOZZLE, SPOROCYTELESS -0.54 0.33 -0.33
70 AT5G28890 transposable element gene -0.54 0.31 -0.34
71 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 -0.54 0.32 -0.33
72 AT3G22710 F-box family protein -0.54 0.3 -0.35
73 AT1G18485 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.32 -0.31
74 AT4G17570 GATA transcription factor 26 GATA transcription factor 26 -0.54 0.32 -0.31
75 AT1G62530 Plant protein of unknown function (DUF863) -0.54 0.32 -0.29
76 AT3G42340 transposable element gene 0.54 0.33 -0.31
77 AT3G20990 transposable element gene -0.54 0.31 -0.3
78 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.54 0.31 -0.31
79 AT5G03640 Protein kinase superfamily protein -0.54 0.33 -0.31
80 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.54 0.33 -0.32
81 ATMG00680 hypothetical protein ORF122C 0.54 0.32 -0.31
82 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 0.54 0.33 -0.3
83 AT1G23240 Caleosin-related family protein -0.54 0.32 -0.3
84 AT1G23680 Domain of unknown function (DUF220) 0.53 0.31 -0.31
85 AT3G05130 BEST Arabidopsis thaliana protein match is: Prefoldin
chaperone subunit family protein (TAIR:AT5G27330.1); Has
171032 Blast hits to 82560 proteins in 3364 species: Archae
- 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365;
Plants - 9598; Viruses - 592; Other Eukaryotes - 39097
(source: NCBI BLink).		 -0.53 0.32 -0.32
86 AT5G23790 galactinol synthase 5 galactinol synthase 5, galactinol
synthase 5		 -0.53 0.31 -0.33
87 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.53 0.29 -0.3
88 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.53 0.3 -0.34
89 AT5G66970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.53 0.31 -0.29
90 AT1G70360 F-box family protein 0.53 0.3 -0.33
91 AT3G43970 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF295)
(TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.3 -0.31
92 AT5G43590 Acyl transferase/acyl hydrolase/lysophospholipase
superfamily protein		 -0.53 0.32 -0.33
93 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 -0.53 0.32 -0.31
94 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.53 0.31 -0.31
95 AT1G79190 ARM repeat superfamily protein 0.53 0.34 -0.32
96 AT5G38960 RmlC-like cupins superfamily protein -0.53 0.33 -0.31
97 AT1G49780 plant U-box 26 plant U-box 26 0.53 0.34 -0.32
98 AT5G38800 basic leucine-zipper 43 basic leucine-zipper 43, basic
leucine-zipper 43		 0.52 0.29 -0.31
99 AT3G29775 transposable element gene -0.52 0.32 -0.3
100 AT1G56030 RING/U-box superfamily protein 0.52 0.31 -0.33
101 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.52 0.32 -0.31
102 AT3G16930 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.32 -0.33
103 ATMG01020 hypothetical protein ORF153B -0.52 0.32 -0.32
104 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.32 -0.3
105 AT5G56200 C2H2 type zinc finger transcription factor family -0.52 0.31 -0.31
106 AT5G28670 transposable element gene 0.52 0.3 -0.32
107 AT5G46320 MADS-box family protein 0.52 0.3 -0.31
108 AT2G21740 Protein of unknown function (DUF1278) -0.52 0.33 -0.33
109 AT2G22620 Rhamnogalacturonate lyase family protein 0.52 0.33 -0.31
110 AT4G07530 transposable element gene -0.51 0.29 -0.3
111 AT4G03156 small GTPase-related -0.51 0.31 -0.31
112 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.34 -0.3
113 ATMG00470 hypothetical protein ORF122A 0.51 0.31 -0.31
114 AT1G30300 Metallo-hydrolase/oxidoreductase superfamily protein 0.51 0.35 -0.35
115 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.51 0.33 -0.33
116 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 0.51 0.3 -0.31
117 AT5G19010 mitogen-activated protein kinase 16 mitogen-activated protein kinase
16		 -0.51 0.31 -0.33
118 AT1G30020 Protein of unknown function, DUF538 -0.51 0.33 -0.31
119 AT4G23910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits
to 52 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.3 -0.34
120 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 0.5 0.3 -0.31
121 AT2G11235 transposable element gene 0.5 0.3 -0.33
122 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 0.5 0.31 -0.31
123 AT1G58390 Disease resistance protein (CC-NBS-LRR class) family 0.49 0.33 -0.29
124 AT4G17785 myb domain protein 39 myb domain protein 39 0.49 0.3 -0.31
125 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.49 0.33 -0.31
126 AT5G61120 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.49 0.32 -0.3
127 AT3G29791 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.33 -0.31
128 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 0.48 0.3 -0.32
129 AT1G51520 RNA-binding (RRM/RBD/RNP motifs) family protein 0.48 0.31 -0.3
130 AT2G13950 Cysteine/Histidine-rich C1 domain family protein 0.48 0.3 -0.32
131 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 0.48 0.35 -0.31
132 AT3G58530 RNI-like superfamily protein 0.48 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.6 0.34 -0.33
134 C0206 Phosphatidylglycerol-34:4 - Phosphatidylglycerol-34:4 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.55 0.33 -0.33
135 C0048 8-Methylsulfinyl-n-octylglucosinolate - 8-Methylsulfinyloctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.55 0.3 -0.31 C0048
136 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.52 0.34 -0.34
137 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.51 0.33 -0.34 C0246