AT1G34220 : -
Query Information
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AGICode AT1G34220
Description Regulator of Vps4 activity in the MVB pathway protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein 1 0.32 -0.3
2 AT4G15470 Bax inhibitor-1 family protein 0.8 0.31 -0.32
3 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.79 0.3 -0.32
4 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.79 0.32 -0.3
5 AT3G17410 Protein kinase superfamily protein 0.79 0.34 -0.32
6 AT2G17760 Eukaryotic aspartyl protease family protein 0.79 0.33 -0.34
7 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 0.78 0.31 -0.31
8 AT4G11740 Ubiquitin-like superfamily protein SAY1 0.78 0.32 -0.31
9 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 0.78 0.32 -0.32
10 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 0.78 0.29 -0.32
11 AT3G15040 Protein of unknown function, DUF584 0.78 0.33 -0.32
12 AT1G20150 Subtilisin-like serine endopeptidase family protein -0.77 0.3 -0.32
13 AT5G20650 copper transporter 5 copper transporter 5 0.77 0.33 -0.32
14 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII B, VIIIB -0.77 0.31 -0.3
15 AT3G55140 Pectin lyase-like superfamily protein 0.76 0.31 -0.31
16 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 0.76 0.31 -0.34
17 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.76 0.32 -0.29
18 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.76 0.33 -0.33
19 AT1G71950 Proteinase inhibitor, propeptide 0.75 0.32 -0.32
20 AT3G44830 Lecithin:cholesterol acyltransferase family protein 0.75 0.32 -0.33
21 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 0.75 0.32 -0.3
22 AT2G36330 Uncharacterised protein family (UPF0497) 0.75 0.31 -0.31
23 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.75 0.3 -0.31
24 AT5G02040 prenylated RAB acceptor 1.A1 prenylated RAB acceptor 1.A1 0.74 0.32 -0.32
25 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.74 0.32 -0.32
26 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.73 0.31 -0.32
27 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.73 0.33 -0.33
28 AT3G49480 Protein with RNI-like/FBD-like domains 0.73 0.32 -0.31
29 AT1G31730 Adaptin family protein 0.73 0.32 -0.31
30 AT1G59710 Protein of unknown function (DUF569) 0.73 0.3 -0.33
31 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.73 0.33 -0.34
32 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 0.73 0.33 -0.31
33 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 0.73 0.31 -0.31
34 AT3G57070 Glutaredoxin family protein 0.72 0.33 -0.31
35 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.72 0.35 -0.32
36 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.72 0.32 -0.3
37 AT2G27260 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.72 0.33 -0.31
38 AT1G69340 appr-1-p processing enzyme family protein 0.72 0.29 -0.32
39 AT4G14490 SMAD/FHA domain-containing protein -0.72 0.31 -0.31
40 AT5G17640 Protein of unknown function (DUF1005) 0.71 0.31 -0.31
41 AT5G52580 RabGAP/TBC domain-containing protein 0.71 0.33 -0.32
42 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.71 0.31 -0.31
43 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.71 0.31 -0.34
44 AT3G20800 Cell differentiation, Rcd1-like protein 0.71 0.31 -0.33
45 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 0.71 0.31 -0.34
46 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 0.71 0.34 -0.32
47 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 0.71 0.3 -0.32
48 AT5G58060 SNARE-like superfamily protein ATGP1, ATYKT61, YKT61 0.71 0.3 -0.32
49 AT2G40680 transposable element gene -0.7 0.31 -0.32
50 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 0.7 0.31 -0.3
51 AT1G77460 Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein		 -0.7 0.32 -0.33
52 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 0.7 0.33 -0.33
53 AT1G14400 ubiquitin carrier protein 1 ATUBC1, ubiquitin carrier protein
1, UBIQUITIN CONJUGATING ENZYME 1		 0.7 0.28 -0.31
54 AT1G33860 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.7 0.3 -0.32
55 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.7 0.32 -0.32
56 AT1G06740 transposable element gene -0.7 0.32 -0.3
57 AT5G15460 membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold
protein 2		 -0.7 0.34 -0.31
58 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 0.69 0.31 -0.3
59 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.69 0.32 -0.31
60 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 0.69 0.3 -0.32
61 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.69 0.32 -0.33
62 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.33
63 AT1G10330 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.31 -0.31
64 AT4G18530 Protein of unknown function (DUF707) 0.69 0.32 -0.32
65 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.68 0.31 -0.32
66 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.68 0.31 -0.32
67 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.68 0.34 -0.31
68 AT4G19470 Leucine-rich repeat (LRR) family protein -0.67 0.3 -0.31
69 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.67 0.31 -0.32
70 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 -0.66 0.33 -0.3
71 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.66 0.3 -0.33
72 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.66 0.32 -0.31
73 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.65 0.33 -0.32
74 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.65 0.33 -0.32
75 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 -0.65 0.3 -0.34
76 AT2G38590 F-box and associated interaction domains-containing protein -0.65 0.32 -0.28
77 AT4G04410 transposable element gene -0.64 0.32 -0.32
78 AT3G43140 transposable element gene -0.64 0.32 -0.32
79 AT5G11570 Major facilitator superfamily protein -0.64 0.31 -0.31
80 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.64 0.3 -0.29
81 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.31
82 AT4G25540 homolog of DNA mismatch repair protein MSH3 ATMSH3, homolog of DNA mismatch
repair protein MSH3		 -0.63 0.32 -0.33
83 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.63 0.3 -0.33
84 AT4G34320 Protein of unknown function (DUF677) -0.63 0.33 -0.3
85 AT5G50120 Transducin/WD40 repeat-like superfamily protein -0.62 0.3 -0.31
86 AT2G32120 heat-shock protein 70T-2 heat-shock protein 70T-2 -0.62 0.3 -0.33
87 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 -0.62 0.33 -0.3
88 AT4G14390 Ankyrin repeat family protein -0.61 0.33 -0.32
89 AT2G03580 F-box family protein-related -0.6 0.32 -0.3
90 AT5G27530 Pectin lyase-like superfamily protein -0.6 0.3 -0.32
91 AT3G47950 H(+)-ATPase 4 H(+)-ATPase 4, H(+)-ATPase 4 -0.6 0.33 -0.32
92 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.59 0.31 -0.31
93 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.59 0.31 -0.33
94 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).		 -0.59 0.31 -0.32
95 AT2G06120 transposable element gene -0.59 0.32 -0.3
96 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.33
97 AT5G52390 PAR1 protein -0.59 0.32 -0.32
98 AT1G78840 F-box/RNI-like/FBD-like domains-containing protein -0.59 0.29 -0.28
99 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.31 -0.31
100 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.59 0.3 -0.32
101 AT2G46590 Dof-type zinc finger DNA-binding family protein DOF AFFECTING GERMINATION 2 -0.59 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.85 0.43 -0.44 C0067
103 C0174 MST_2370.2 - - - 0.72 0.45 -0.45