AT1G06440 : -
Query Information
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AGICode AT1G06440
Description Ubiquitin carboxyl-terminal hydrolase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein 1 0.32 -0.33
2 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 0.78 0.32 -0.33
3 AT1G52160 tRNAse Z3 tRNAse Z3 0.77 0.33 -0.31
4 AT2G28520 vacuolar proton ATPase A1 vacuolar proton ATPase A1 0.76 0.29 -0.32
5 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.74 0.31 -0.32
6 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.74 0.29 -0.31
7 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 0.73 0.31 -0.32
8 AT1G04945 HIT-type Zinc finger family protein 0.73 0.31 -0.3
9 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.33 -0.34
10 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.33 -0.33
11 AT3G07310 Protein of unknown function (DUF760) -0.71 0.3 -0.33
12 AT3G59020 ARM repeat superfamily protein 0.71 0.32 -0.33
13 AT3G07060 NHL domain-containing protein embryo defective 1974 0.71 0.32 -0.3
14 AT3G56430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in
196 species: Archae - 12; Bacteria - 170; Metazoa - 996;
Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes -
1428 (source: NCBI BLink).		 0.71 0.29 -0.3
15 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 0.7 0.3 -0.31
16 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.33 -0.32
17 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.7 0.3 -0.32
18 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.7 0.34 -0.33
19 AT4G27640 ARM repeat superfamily protein 0.69 0.32 -0.33
20 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.69 0.32 -0.32
21 AT1G13810 Restriction endonuclease, type II-like superfamily protein 0.69 0.31 -0.3
22 AT5G17520 root cap 1 (RCP1) MALTOSE EXCESS 1, ROOT CAP 1 -0.69 0.33 -0.31
23 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 0.68 0.3 -0.31
24 AT4G09600 GAST1 protein homolog 3 GAST1 protein homolog 3 -0.68 0.32 -0.32
25 AT3G06330 RING/U-box superfamily protein -0.68 0.3 -0.32
26 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 -0.68 0.3 -0.3
27 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.68 0.31 -0.32
28 AT5G08580 Calcium-binding EF hand family protein -0.68 0.31 -0.33
29 AT4G30990 ARM repeat superfamily protein 0.68 0.33 -0.31
30 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.68 0.31 -0.33
31 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.68 0.33 -0.32
32 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.67 0.33 -0.31
33 AT2G40410 Staphylococcal nuclease homologue -0.67 0.33 -0.34
34 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.31
35 AT4G16060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 42
Blast hits to 42 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 7 (source: NCBI BLink).		 -0.67 0.3 -0.33
36 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 -0.66 0.32 -0.31
37 AT4G10000 Thioredoxin family protein -0.66 0.31 -0.34
38 AT2G03500 Homeodomain-like superfamily protein -0.66 0.32 -0.32
39 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein 0.66 0.33 -0.31
40 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 0.66 0.3 -0.3
41 AT3G01130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.33 -0.31
42 AT1G75600 Histone superfamily protein -0.66 0.32 -0.29
43 AT3G03910 glutamate dehydrogenase 3 glutamate dehydrogenase 3 0.66 0.33 -0.34
44 AT1G24764 microtubule-associated proteins 70-2 microtubule-associated proteins
70-2, microtubule-associated
proteins 70-2		 -0.66 0.31 -0.28
45 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.29 -0.34
46 AT2G33735 Chaperone DnaJ-domain superfamily protein -0.65 0.32 -0.34
47 ATMG00690 hypothetical protein ORF240A 0.65 0.32 -0.31
48 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.64 0.32 -0.34
49 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.64 0.34 -0.33
50 AT3G13870 Root hair defective 3 GTP-binding protein (RHD3) GOLGI MUTANT 8, ROOT HAIR
DEFECTIVE 3		 0.63 0.32 -0.28
51 AT1G64185 Lactoylglutathione lyase / glyoxalase I family protein 0.63 0.3 -0.32
52 AT1G17960 Threonyl-tRNA synthetase 0.63 0.31 -0.3
53 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.29 -0.31
54 AT5G42910 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.63 0.34 -0.29
55 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.63 0.29 -0.34
56 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.63 0.31 -0.31
57 AT1G17720 Protein phosphatase 2A, regulatory subunit PR55 ATB BETA 0.63 0.3 -0.29
58 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.63 0.31 -0.31
59 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.31 -0.33
60 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.33
61 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein 0.63 0.32 -0.31
62 AT2G22100 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.32 -0.31
63 AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN phosphoribosyl pyrophosphate
amidotransferase 3, GLN
phosphoribosyl pyrophosphate
amidotransferase 3		 0.62 0.33 -0.31
64 AT4G00830 RNA-binding (RRM/RBD/RNP motifs) family protein LHP1-Interacting Factor 2 0.62 0.32 -0.3
65 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.62 0.32 -0.32
66 AT4G13985 FBD-associated F-box protein FBD-associated F-box protein -0.62 0.3 -0.31
67 AT2G39060 Nodulin MtN3 family protein AtSWEET9, SWEET9 -0.62 0.31 -0.33
68 AT1G05520 Sec23/Sec24 protein transport family protein 0.62 0.32 -0.31
69 AT1G16820 vacuolar ATP synthase catalytic subunit-related /
V-ATPase-related / vacuolar proton pump-related		 -0.61 0.31 -0.32
70 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.61 0.31 -0.33
71 AT3G20550 SMAD/FHA domain-containing protein DAWDLE -0.61 0.33 -0.32
72 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.32 -0.32
73 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 -0.6 0.33 -0.31
74 AT1G07720 3-ketoacyl-CoA synthase 3 3-ketoacyl-CoA synthase 3 -0.6 0.33 -0.32
75 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.6 0.32 -0.34
76 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 -0.6 0.32 -0.32
77 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.6 0.31 -0.33
78 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.6 0.32 -0.3
79 AT5G07080 HXXXD-type acyl-transferase family protein -0.59 0.34 -0.32
80 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.59 0.31 -0.33
81 AT5G14400 cytochrome P450, family 724, subfamily A, polypeptide 1 cytochrome P450, family 724,
subfamily A, polypeptide 1		 -0.59 0.29 -0.3
82 AT5G49230 Drought-responsive family protein HYPERSENSITIVE TO RED AND BLUE -0.59 0.32 -0.31
83 AT2G10380 transposable element gene -0.58 0.31 -0.31
84 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 -0.58 0.33 -0.3
85 AT1G69630 F-box/RNI-like superfamily protein -0.58 0.3 -0.31
86 AT3G56830 Protein of unknown function (DUF565) -0.57 0.32 -0.32
87 AT5G38360 alpha/beta-Hydrolases superfamily protein -0.57 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.77 0.44 -0.47 C0105