AT1G62780 : -
Query Information
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AGICode AT1G62780
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 1 0.31 -0.32
2 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.94 0.31 -0.33
3 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.93 0.34 -0.34
4 AT5G65220 Ribosomal L29 family protein 0.93 0.29 -0.33
5 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.93 0.31 -0.34
6 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.92 0.31 -0.32
7 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.92 0.31 -0.3
8 AT3G13120 Ribosomal protein S10p/S20e family protein 0.92 0.33 -0.33
9 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.31 -0.31
10 AT3G54210 Ribosomal protein L17 family protein 0.91 0.31 -0.32
11 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.91 0.31 -0.32
12 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.91 0.32 -0.32
13 AT1G14270 CAAX amino terminal protease family protein 0.91 0.3 -0.32
14 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.91 0.33 -0.34
15 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.91 0.31 -0.31
16 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.9 0.31 -0.33
17 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.9 0.32 -0.3
18 AT2G33450 Ribosomal L28 family 0.9 0.31 -0.34
19 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.9 0.33 -0.28
20 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.31 -0.31
21 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.9 0.32 -0.33
22 AT1G53520 Chalcone-flavanone isomerase family protein 0.9 0.32 -0.3
23 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.9 0.32 -0.3
24 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.9 0.31 -0.32
25 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.9 0.33 -0.32
26 AT1G76450 Photosystem II reaction center PsbP family protein 0.89 0.34 -0.31
27 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.89 0.34 -0.31
28 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.89 0.31 -0.32
29 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.89 0.29 -0.32
30 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.31 -0.31
31 AT4G17560 Ribosomal protein L19 family protein 0.89 0.31 -0.32
32 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.3 -0.32
33 AT1G32470 Single hybrid motif superfamily protein 0.89 0.32 -0.31
34 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.89 0.35 -0.32
35 AT4G15510 Photosystem II reaction center PsbP family protein 0.89 0.31 -0.3
36 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.89 0.33 -0.31
37 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.32 -0.31
38 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.88 0.34 -0.3
39 AT5G47190 Ribosomal protein L19 family protein 0.88 0.33 -0.3
40 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.88 0.29 -0.32
41 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.88 0.31 -0.3
42 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.88 0.3 -0.3
43 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.88 0.34 -0.33
44 AT5G66530 Galactose mutarotase-like superfamily protein 0.88 0.32 -0.33
45 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.88 0.31 -0.31
46 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.88 0.32 -0.33
47 AT2G24090 Ribosomal protein L35 0.88 0.32 -0.32
48 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.31 -0.32
49 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.87 0.3 -0.31
50 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.87 0.32 -0.31
51 AT4G37040 methionine aminopeptidase 1D methionine aminopeptidase 1D 0.87 0.31 -0.3
52 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.87 0.31 -0.35
53 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.32 -0.31
54 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.87 0.32 -0.3
55 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.87 0.33 -0.3
56 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.87 0.3 -0.32
57 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.87 0.3 -0.32
58 AT1G29070 Ribosomal protein L34 0.87 0.31 -0.31
59 AT5G54600 Translation protein SH3-like family protein 0.87 0.31 -0.33
60 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.31 -0.34
61 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.86 0.31 -0.31
62 AT3G55330 PsbP-like protein 1 PsbP-like protein 1 0.86 0.32 -0.31
63 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.86 0.33 -0.31
64 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 0.86 0.31 -0.33
65 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.86 0.3 -0.3
66 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.31 -0.3
67 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.86 0.33 -0.33
68 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.86 0.33 -0.3
69 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.86 0.3 -0.32
70 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.86 0.33 -0.31
71 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.86 0.32 -0.33
72 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.86 0.29 -0.31
73 AT3G25290 Auxin-responsive family protein -0.8 0.31 -0.31
74 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein -0.71 0.32 -0.32
75 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.32 -0.31
76 AT2G39310 jacalin-related lectin 22 jacalin-related lectin 22 -0.7 0.33 -0.34
77 AT4G11670 Protein of unknown function (DUF810) -0.69 0.31 -0.31
78 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.69 0.31 -0.3
79 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 -0.68 0.32 -0.31
80 AT5G38030 MATE efflux family protein -0.67 0.3 -0.32
81 AT2G35980 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 ARABIDOPSIS NDR1/HIN1-LIKE 10,
NDR1/HIN1-LIKE,
YELLOW-LEAF-SPECIFIC GENE 9		 -0.67 0.31 -0.33
82 AT2G38340 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 19		 -0.66 0.31 -0.32
83 AT4G22610 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.66 0.32 -0.3
84 AT3G52830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: Ankyrin
repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits
to 6 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.65 0.32 -0.3
85 AT1G55265 Protein of unknown function, DUF538 -0.64 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.75 0.46 -0.45 C0051