AT1G16280 : Arabidopsis thaliana RNA helicase 36
Query Information
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AGICode AT1G16280
Description RNA helicase 36
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 1 0.33 -0.32
2 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.89 0.31 -0.32
3 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.88 0.32 -0.3
4 AT3G23620 Ribosomal RNA processing Brix domain protein 0.85 0.33 -0.32
5 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.85 0.31 -0.31
6 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.85 0.32 -0.3
7 AT1G06380 Ribosomal protein L1p/L10e family 0.85 0.32 -0.31
8 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.85 0.35 -0.31
9 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.85 0.29 -0.32
10 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.85 0.32 -0.31
11 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.84 0.32 -0.32
12 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.83 0.3 -0.32
13 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.83 0.32 -0.29
14 AT1G80750 Ribosomal protein L30/L7 family protein 0.82 0.31 -0.33
15 AT5G23880 cleavage and polyadenylation specificity factor 100 CLEAVAGE AND POLYADENYLATION
SPECIFICITY FACTOR 100, cleavage
and polyadenylation specificity
factor 100, EMBRYO DEFECTIVE 1265,
ENHANCED SILENCING PHENOTYPE 5		 0.82 0.31 -0.32
16 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.82 0.32 -0.3
17 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.82 0.31 -0.32
18 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.82 0.31 -0.32
19 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.82 0.33 -0.33
20 AT5G11240 transducin family protein / WD-40 repeat family protein 0.82 0.3 -0.32
21 AT3G55510 Noc2p family REBELOTE 0.82 0.3 -0.32
22 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.81 0.29 -0.32
23 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.81 0.31 -0.32
24 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.81 0.32 -0.29
25 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.81 0.33 -0.31
26 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.81 0.32 -0.32
27 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.81 0.31 -0.3
28 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.81 0.31 -0.32
29 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 0.8 0.31 -0.31
30 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.33 -0.31
31 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.8 0.35 -0.3
32 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.8 0.3 -0.31
33 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.8 0.31 -0.32
34 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.8 0.29 -0.28
35 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.8 0.33 -0.32
36 AT5G22320 Leucine-rich repeat (LRR) family protein 0.8 0.29 -0.29
37 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.8 0.32 -0.33
38 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.8 0.31 -0.33
39 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.79 0.31 -0.31
40 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.79 0.33 -0.33
41 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.79 0.33 -0.35
42 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 0.79 0.32 -0.31
43 AT3G22660 rRNA processing protein-related 0.79 0.31 -0.33
44 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.79 0.31 -0.31
45 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.78 0.32 -0.31
46 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.33 -0.31
47 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.78 0.32 -0.34
48 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.31 -0.33
49 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.78 0.31 -0.33
50 AT1G60080 3'-5'-exoribonuclease family protein 0.78 0.33 -0.3
51 AT2G34970 Trimeric LpxA-like enzyme 0.78 0.34 -0.31
52 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.78 0.31 -0.31
53 AT2G25970 KH domain-containing protein 0.78 0.31 -0.3
54 AT3G06780 glycine-rich protein -0.78 0.31 -0.32
55 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.78 0.32 -0.34
56 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.78 0.29 -0.33
57 AT3G16810 pumilio 24 pumilio 24, pumilio 24 0.78 0.34 -0.29
58 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.33 -0.32
59 AT4G28990 RNA-binding protein-related 0.77 0.29 -0.32
60 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 0.77 0.31 -0.33
61 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.77 0.32 -0.33
62 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.77 0.3 -0.32
63 AT3G62310 RNA helicase family protein 0.77 0.31 -0.31
64 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.77 0.3 -0.31
65 AT1G54380 spliceosome protein-related 0.77 0.31 -0.32
66 AT5G51280 DEAD-box protein abstrakt, putative 0.77 0.32 -0.32
67 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.77 0.32 -0.31
68 AT5G05210 Surfeit locus protein 6 0.76 0.33 -0.3
69 AT1G19450 Major facilitator superfamily protein 0.76 0.32 -0.31
70 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.76 0.33 -0.31
71 AT5G41190 CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)
Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA
nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.76 0.3 -0.31
72 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.76 0.31 -0.32
73 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.34
74 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.76 0.32 -0.33
75 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.76 0.32 -0.33
76 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.76 0.33 -0.34
77 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.75 0.32 -0.32
78 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.75 0.31 -0.31
79 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 0.75 0.32 -0.31
80 AT1G22730 MA3 domain-containing protein 0.75 0.32 -0.33
81 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.75 0.35 -0.32
82 AT1G04945 HIT-type Zinc finger family protein 0.75 0.33 -0.33
83 AT4G11960 PGR5-like B PGR5-like B -0.75 0.33 -0.31
84 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.75 0.32 -0.31
85 AT5G48970 Mitochondrial substrate carrier family protein 0.74 0.32 -0.3
86 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.34 -0.31
87 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.74 0.29 -0.31
88 AT3G58560 DNAse I-like superfamily protein 0.74 0.32 -0.32
89 AT4G38710 glycine-rich protein 0.74 0.3 -0.3
90 AT1G69950 transposable element gene 0.74 0.3 -0.34
91 AT2G21790 ribonucleotide reductase 1 RIBONUCLEOTIDE REDUCTASE LARGE
SUBUNIT 1, CRINKLY LEAVES 8,
RIBONUCLEOTIDE REDUCTASE 1,
ribonucleotide reductase 1		 0.74 0.29 -0.31
92 AT5G19590 Protein of unknown function, DUF538 -0.72 0.33 -0.32
93 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.72 0.3 -0.31
94 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.71 0.31 -0.31
95 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.33 -0.31
96 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.31
97 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.34 -0.31
98 AT4G20820 FAD-binding Berberine family protein -0.68 0.32 -0.29
99 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.67 0.31 -0.31
100 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.66 0.31 -0.31
101 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.31
102 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.66 0.31 -0.3
103 AT2G15230 lipase 1 lipase 1, lipase 1 -0.65 0.31 -0.32
104 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.65 0.31 -0.32
105 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.65 0.32 -0.32
106 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.65 0.29 -0.33
107 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.64 0.32 -0.34
108 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.31
109 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.63 0.31 -0.33
110 AT3G49130 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 -0.63 0.3 -0.3
111 AT1G50740 Transmembrane proteins 14C -0.63 0.3 -0.29
112 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.63 0.32 -0.32
113 AT1G37000 Beta-galactosidase related protein -0.62 0.29 -0.3
114 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 -0.62 0.3 -0.33
115 AT1G30200 F-box family protein -0.62 0.31 -0.3
116 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.61 0.32 -0.33
117 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.32 -0.31
118 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.61 0.31 -0.31