AGICode | AT1G28530 |
Description | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G28530 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.3 | -0.31 | |||
2 | AT1G48000 | myb domain protein 112 | myb domain protein 112, myb domain protein 112 |
-0.78 | 0.32 | -0.31 | ||
3 | AT1G09160 | Protein phosphatase 2C family protein | 0.78 | 0.32 | -0.32 | |||
4 | AT1G74040 | 2-isopropylmalate synthase 1 | 2-isopropylmalate synthase 1, SOPROPYLMALATE SYNTHASE 2, MAML-3 |
0.77 | 0.3 | -0.32 | ||
5 | AT5G39980 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.76 | 0.33 | -0.33 | |||
6 | AT5G18820 | TCP-1/cpn60 chaperonin family protein | chaperonin-60alpha2, embryo defective 3007 |
0.75 | 0.3 | -0.32 | ||
7 | AT1G66520 | formyltransferase, putative | pigment defective 194 | 0.75 | 0.32 | -0.3 | ||
8 | AT1G50570 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.73 | 0.3 | -0.3 | |||
9 | AT5G62980 | Dihydroneopterin aldolase | FOLB2 | 0.73 | 0.33 | -0.32 | ||
10 | AT2G25870 | haloacid dehalogenase-like hydrolase family protein | 0.72 | 0.31 | -0.31 | |||
11 | AT4G37380 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.72 | 0.33 | -0.31 | |||
12 | AT1G45110 | Tetrapyrrole (Corrin/Porphyrin) Methylases | 0.71 | 0.29 | -0.29 | |||
13 | AT1G73020 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632); Has 1198 Blast hits to 1128 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). |
0.71 | 0.31 | -0.32 | |||
14 | AT3G18280 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.71 | 0.32 | -0.31 | |||
15 | AT3G58830 | haloacid dehalogenase (HAD) superfamily protein | 0.71 | 0.32 | -0.3 | |||
16 | AT4G39740 | Thioredoxin superfamily protein | homologue of copper chaperone SCO1 2 |
0.7 | 0.32 | -0.28 | ||
17 | AT1G09660 | RNA-binding KH domain-containing protein | 0.69 | 0.27 | -0.29 | |||
18 | AT2G01070 | Lung seven transmembrane receptor family protein | 0.69 | 0.36 | -0.31 | |||
19 | AT2G37585 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.69 | 0.3 | -0.33 | |||
20 | AT5G11890 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3135 | 0.69 | 0.32 | -0.33 | ||
21 | AT5G07300 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 2 | 0.69 | 0.31 | -0.32 | ||
22 | AT3G14900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3120 | 0.69 | 0.3 | -0.32 | ||
23 | AT3G48510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.32 | -0.33 | |||
24 | AT5G06080 | LOB domain-containing protein 33 | LOB domain-containing protein 33 | -0.68 | 0.31 | -0.33 | ||
25 | AT3G10690 | DNA GYRASE A | DNA GYRASE A | 0.68 | 0.33 | -0.31 | ||
26 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | 0.68 | 0.31 | -0.31 | |||
27 | AT1G18100 | PEBP (phosphatidylethanolamine-binding protein) family protein |
E12A11, MOTHER OF FT AND TFL1 | -0.67 | 0.31 | -0.31 | ||
28 | AT4G37870 | phosphoenolpyruvate carboxykinase 1 | phosphoenolpyruvate carboxykinase 1, PHOSPHOENOLPYRUVATE CARBOXYKINASE |
-0.67 | 0.31 | -0.31 | ||
29 | AT1G59740 | Major facilitator superfamily protein | -0.64 | 0.32 | -0.32 | |||
30 | AT3G06540 | Rab escort protein | AthREP, Rab escort protein | -0.64 | 0.3 | -0.3 | ||
31 | AT1G78780 | pathogenesis-related family protein | -0.63 | 0.32 | -0.3 | |||
32 | AT1G73380 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.63 | 0.33 | -0.3 | |||
33 | AT5G06730 | Peroxidase superfamily protein | -0.63 | 0.33 | -0.32 | |||
34 | AT5G17430 | Integrase-type DNA-binding superfamily protein | BABY BOOM | -0.62 | 0.33 | -0.33 | ||
35 | AT5G47810 | phosphofructokinase 2 | phosphofructokinase 2 | -0.61 | 0.3 | -0.33 | ||
36 | AT4G23450 | RING/U-box superfamily protein | ABA Insensitive RING Protein 1, AtAIRP1 |
-0.61 | 0.32 | -0.32 | ||
37 | AT4G16240 | unknown protein; Has 17010 Blast hits to 4557 proteins in 509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537; Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes - 1688 (source: NCBI BLink). |
-0.61 | 0.33 | -0.32 | |||
38 | AT4G30470 | NAD(P)-binding Rossmann-fold superfamily protein | -0.6 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
39 | C0079 | Digalactosyldiacylglycerol-34:5 | - | Digalactosyldiacylglycerol-34:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.71 | 0.42 | -0.44 | ||
40 | C0143 | Maltitol | - | - | starch degradation II | -0.61 | 0.48 | -0.43 |