AGICode | AT1G28590 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G28590 | GDSL-like Lipase/Acylhydrolase superfamily protein | 1 | 0.31 | -0.3 | |||
2 | AT4G13450 | Adenine nucleotide alpha hydrolases-like superfamily protein |
0.68 | 0.3 | -0.29 | |||
3 | AT2G30260 | U2 small nuclear ribonucleoprotein B | U2 small nuclear ribonucleoprotein B |
-0.68 | 0.29 | -0.31 | ||
4 | AT1G53360 | F-box associated ubiquitination effector family protein | 0.68 | 0.31 | -0.31 | |||
5 | AT3G19630 | Radical SAM superfamily protein | -0.66 | 0.31 | -0.3 | |||
6 | AT4G34400 | AP2/B3-like transcriptional factor family protein | 0.66 | 0.31 | -0.32 | |||
7 | AT1G49240 | actin 8 | actin 8, FRIZZY AND KINKED SHOOTS | -0.65 | 0.3 | -0.29 | ||
8 | AT3G20400 | F-box associated ubiquitination effector family protein | EMBRYO DEFECTIVE 2743 | 0.65 | 0.3 | -0.31 | ||
9 | AT3G15280 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 36 Blast hits to 36 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.31 | -0.33 | |||
10 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | -0.63 | 0.33 | -0.32 | |||
11 | AT5G62400 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.32 | -0.28 | |||
12 | AT3G20860 | NIMA-related kinase 5 | NIMA-related kinase 5, NIMA-related kinase 5 |
0.62 | 0.3 | -0.3 | ||
13 | AT5G37780 | calmodulin 1 | ACAM-1, calmodulin 1, TOUCH 1 | -0.62 | 0.32 | -0.34 | ||
14 | AT4G01280 | Homeodomain-like superfamily protein | 0.62 | 0.33 | -0.3 | |||
15 | AT2G20780 | Major facilitator superfamily protein | -0.62 | 0.31 | -0.31 | |||
16 | AT3G28890 | receptor like protein 43 | receptor like protein 43, receptor like protein 43 |
0.6 | 0.29 | -0.31 | ||
17 | AT1G16730 | unknown protein 6 | unknown protein 6 | 0.6 | 0.33 | -0.33 | ||
18 | AT1G73270 | serine carboxypeptidase-like 6 | serine carboxypeptidase-like 6 | -0.6 | 0.33 | -0.31 | ||
19 | AT2G46480 | galacturonosyltransferase 2 | galacturonosyltransferase 2, GALACTURONOSYLTRANSFERASE 2 |
0.6 | 0.33 | -0.31 | ||
20 | AT1G17800 | early nodulin-like protein 22 | AtENODL22, early nodulin-like protein 22 |
0.59 | 0.31 | -0.3 | ||
21 | AT1G08190 | vacuolar protein sorting 41 | ATVAM2, VACUOLAR PROTEIN SORTING 41, VAM2, vacuolar protein sorting 41, ZIGZAG SUPPRESSOR 2 |
0.59 | 0.33 | -0.3 | ||
22 | AT3G22810 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
0.58 | 0.32 | -0.31 | |||
23 | AT2G29970 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
0.58 | 0.3 | -0.33 | |||
24 | AT4G19185 | nodulin MtN21 /EamA-like transporter family protein | -0.58 | 0.32 | -0.33 | |||
25 | AT5G10420 | MATE efflux family protein | 0.58 | 0.31 | -0.32 | |||
26 | AT5G24120 | sigma factor E | SIGMA FACTOR 5, SIGMA FACTOR 5, sigma factor E |
0.58 | 0.32 | -0.31 | ||
27 | AT1G80720 | Mitochondrial glycoprotein family protein | -0.58 | 0.32 | -0.31 | |||
28 | AT2G37310 | Pentatricopeptide repeat (PPR) superfamily protein | -0.57 | 0.31 | -0.33 | |||
29 | AT5G12260 | BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
30 | AT1G77240 | AMP-dependent synthetase and ligase family protein | 0.57 | 0.31 | -0.3 | |||
31 | AT1G44740 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 8 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.31 | -0.32 | |||
32 | AT2G47120 | NAD(P)-binding Rossmann-fold superfamily protein | 0.57 | 0.3 | -0.32 | |||
33 | AT3G46020 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.57 | 0.33 | -0.31 | |||
34 | AT4G23330 | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.33 | -0.31 | |||
35 | AT2G27900 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
0.57 | 0.31 | -0.3 | |||
36 | AT4G19910 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.56 | 0.32 | -0.29 | |||
37 | AT2G24220 | purine permease 5 | purine permease 5, purine permease 5 |
0.56 | 0.31 | -0.32 | ||
38 | AT3G60600 | vesicle associated protein | (AT)VAP, vesicle associated protein, VAP27, VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 |
-0.56 | 0.31 | -0.32 | ||
39 | AT5G45620 | Proteasome component (PCI) domain protein | -0.56 | 0.31 | -0.31 | |||
40 | AT4G05340 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.33 | -0.31 | |||
41 | AT1G13890 | soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
ATSNAP30, soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
-0.55 | 0.31 | -0.33 | ||
42 | AT4G36410 | ubiquitin-conjugating enzyme 17 | ubiquitin-conjugating enzyme 17 | -0.55 | 0.29 | -0.34 | ||
43 | AT2G02350 | SKP1 interacting partner 3 | Phloem protein 2-B9, SKP1 interacting partner 3 |
0.55 | 0.32 | -0.31 | ||
44 | AT4G22250 | RING/U-box superfamily protein | -0.54 | 0.32 | -0.3 | |||
45 | AT2G44880 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.54 | 0.31 | -0.32 | |||
46 | AT4G24600 | unknown protein; Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.31 | -0.31 | |||
47 | AT5G39760 | homeobox protein 23 | homeobox protein 23, homeobox protein 23, ZINC FINGER HOMEODOMAIN 10 |
-0.54 | 0.29 | -0.31 | ||
48 | AT3G42260 | transposable element gene | 0.54 | 0.32 | -0.3 | |||
49 | AT4G26040 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.3 | |||
50 | AT2G25800 | Protein of unknown function (DUF810) | -0.54 | 0.31 | -0.32 | |||
51 | AT2G15520 | transposable element gene | 0.53 | 0.31 | -0.3 | |||
52 | AT3G24360 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.53 | 0.32 | -0.31 | |||
53 | AT2G10650 | transposable element gene | 0.53 | 0.3 | -0.31 | |||
54 | AT5G62040 | PEBP (phosphatidylethanolamine-binding protein) family protein |
brother of FT and TFL1 | 0.53 | 0.31 | -0.29 | ||
55 | AT4G14130 | xyloglucan endotransglucosylase/hydrolase 15 | xyloglucan endotransglucosylase/hydrolase 15, xyloglucan endotransglycosylase 7 |
-0.53 | 0.31 | -0.32 | ||
56 | AT2G33340 | MOS4-associated complex 3B | MOS4-associated complex 3B | -0.53 | 0.32 | -0.31 | ||
57 | AT2G15780 | Cupredoxin superfamily protein | -0.53 | 0.29 | -0.31 | |||
58 | AT3G15200 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.53 | 0.31 | -0.3 | |||
59 | AT3G15970 | NUP50 (Nucleoporin 50 kDa) protein | -0.53 | 0.35 | -0.32 | |||
60 | AT3G56690 | Cam interacting protein 111 | Cam interacting protein 111 | -0.53 | 0.32 | -0.31 | ||
61 | AT2G07040 | Leucine-rich repeat protein kinase family protein | ATPRK2A, PRK2A | -0.53 | 0.32 | -0.32 | ||
62 | AT2G28840 | XB3 ortholog 1 in Arabidopsis thaliana | XB3 ortholog 1 in Arabidopsis thaliana |
-0.52 | 0.31 | -0.32 | ||
63 | AT2G03210 | fucosyltransferase 2 | ATFUT2, fucosyltransferase 2 | 0.52 | 0.33 | -0.34 | ||
64 | AT4G33720 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.52 | 0.31 | -0.31 | |||
65 | AT3G54060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes - 84 (source: NCBI BLink). |
0.52 | 0.33 | -0.32 | |||
66 | AT1G03990 | Long-chain fatty alcohol dehydrogenase family protein | 0.52 | 0.3 | -0.3 | |||
67 | AT1G54240 | winged-helix DNA-binding transcription factor family protein |
-0.52 | 0.32 | -0.31 | |||
68 | AT1G47380 | Protein phosphatase 2C family protein | -0.52 | 0.33 | -0.32 | |||
69 | AT3G42710 | transposable element gene | -0.52 | 0.3 | -0.34 | |||
70 | AT1G39350 | transposable element gene | 0.52 | 0.33 | -0.32 | |||
71 | AT4G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.51 | 0.31 | -0.33 | |||
72 | AT3G23100 | homolog of human DNA ligase iv-binding protein XRCC4 | homolog of human DNA ligase iv-binding protein XRCC4 |
-0.51 | 0.29 | -0.32 | ||
73 | AT5G20370 | serine-rich protein-related | 0.51 | 0.32 | -0.3 | |||
74 | AT4G18710 | Protein kinase superfamily protein | SHAGGY-LIKE KINASE 21, BRASSINOSTEROID-INSENSITIVE 2, DWARF 12, SHAGGY-LIKE KINASE 21, ULTRACURVATA 1 |
-0.51 | 0.31 | -0.32 | ||
75 | AT1G73440 | calmodulin-related | 0.51 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
76 | C0121 | Isoheptylglucosinolate | - | - | - | -0.72 | 0.45 | -0.42 | ||
77 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
-0.71 | 0.5 | -0.44 |