AT1G13190 : -
Query Information
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AGICode AT1G13190
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.31 -0.34
2 AT1G54060 6B-interacting protein 1-like 1 6B-interacting protein 1-like 1 0.69 0.33 -0.32
3 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.69 0.33 -0.32
4 AT1G32460 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.3 -0.32
5 AT1G35430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G09170.1); Has 23 Blast
hits to 23 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.3 -0.32
6 AT3G12150 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2048 (InterPro:IPR019149); Has 421
Blast hits to 334 proteins in 155 species: Archae - 2;
Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43;
Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).		 0.66 0.31 -0.32
7 AT3G24190 Protein kinase superfamily protein -0.64 0.3 -0.31
8 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.32 -0.31
9 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.64 0.31 -0.34
10 AT1G79670 Wall-associated kinase family protein RESISTANCE TO FUSARIUM OXYSPORUM
1, WAKL22		 0.62 0.31 -0.32
11 AT3G14780 CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: glucan synthase-like 4 (TAIR:AT3G14570.2); Has
315 Blast hits to 313 proteins in 50 species: Archae - 2;
Bacteria - 16; Metazoa - 11; Fungi - 7; Plants - 181;
Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).		 0.62 0.31 -0.31
12 AT5G09880 Splicing factor, CC1-like -0.62 0.31 -0.3
13 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 -0.61 0.35 -0.32
14 AT2G47820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G09040.1); Has 628 Blast hits
to 543 proteins in 149 species: Archae - 0; Bacteria - 106;
Metazoa - 145; Fungi - 69; Plants - 97; Viruses - 10; Other
Eukaryotes - 201 (source: NCBI BLink).		 -0.61 0.3 -0.33
15 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.61 0.32 -0.3
16 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.61 0.3 -0.32
17 AT1G12530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits
to 53 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.3 -0.29
18 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.6 0.32 -0.32
19 AT5G62930 SGNH hydrolase-type esterase superfamily protein 0.6 0.31 -0.31
20 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 0.6 0.31 -0.33
21 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein -0.6 0.3 -0.32
22 AT4G08220 transposable element gene 0.6 0.32 -0.3
23 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 -0.6 0.31 -0.34
24 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.6 0.31 -0.32
25 AT3G05950 RmlC-like cupins superfamily protein 0.59 0.33 -0.33
26 AT2G10050 transposable element gene -0.59 0.31 -0.32
27 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.3 -0.32
28 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 -0.59 0.33 -0.32
29 AT3G51370 Protein phosphatase 2C family protein 0.58 0.3 -0.3
30 AT3G09470 Major facilitator superfamily protein 0.58 0.31 -0.3
31 AT5G18550 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.58 0.3 -0.33
32 AT1G08660 MALE GAMETOPHYTE DEFECTIVE 2 MALE GAMETOPHYTE DEFECTIVE 2 0.57 0.31 -0.32
33 AT4G00040 Chalcone and stilbene synthase family protein -0.57 0.33 -0.3
34 AT4G32010 HSI2-like 1 HSI2-L1, HSI2-like 1,
VP1/ABI3-LIKE 2		 -0.57 0.32 -0.32
35 AT5G07740 actin binding -0.57 0.32 -0.35
36 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.56 0.32 -0.32
37 AT1G63110 GPI transamidase subunit PIG-U 0.56 0.31 -0.33
38 AT1G21440 Phosphoenolpyruvate carboxylase family protein 0.56 0.31 -0.32
39 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.31
40 AT1G34280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.33 -0.32
41 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.56 0.33 -0.32
42 AT2G44950 histone mono-ubiquitination 1 histone mono-ubiquitination 1,
REDUCED DORMANCY 4		 -0.56 0.34 -0.32
43 AT1G31240 Bromodomain transcription factor 0.55 0.31 -0.32
44 AT1G05040 BEST Arabidopsis thaliana protein match is:
Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has
14 Blast hits to 12 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.32
45 AT5G65130 Integrase-type DNA-binding superfamily protein 0.55 0.32 -0.3
46 AT1G48200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.33 -0.32
47 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.55 0.31 -0.32
48 AT1G64710 GroES-like zinc-binding dehydrogenase family protein -0.54 0.3 -0.3
49 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 -0.54 0.32 -0.31
50 AT5G07040 RING/U-box superfamily protein 0.54 0.32 -0.32
51 AT1G15200 protein-protein interaction regulator family protein -0.54 0.29 -0.33
52 AT4G02900 ERD (early-responsive to dehydration stress) family protein -0.54 0.32 -0.33
53 AT1G32210 Defender against death (DAD family) protein DEFENDER AGAINST APOPTOTIC DEATH 1 0.53 0.32 -0.31
54 AT1G63670 Protein of unknown function (DUF3741) -0.53 0.33 -0.3
55 AT5G20070 nudix hydrolase homolog 19 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 19, nudix
hydrolase homolog 19, nudix
hydrolase homolog 19		 -0.53 0.31 -0.32
56 AT5G25530 DNAJ heat shock family protein -0.53 0.3 -0.31
57 AT4G11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /
3-hydroxy-3-methylglutaryl coenzyme A synthase		 FLAKY POLLEN 1,
HYDROXYMETHYLGLUTARYL-COA
SYNTHASE, MVA1		 0.53 0.31 -0.3
58 AT2G31870 Poly (ADP-ribose) glycohydrolase (PARG) poly(ADP-ribose) glycohydrolase 1,
Sanskrit for 'bright'		 -0.53 0.31 -0.32
59 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 -0.52 0.33 -0.32
60 AT1G68920 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.52 0.33 -0.3
61 AT1G07910 RNAligase AtRLG1, ARABIDOPSIS THALIANA RNA
LIGASE, RNAligase		 -0.52 0.33 -0.3
62 AT3G03190 glutathione S-transferase F11 glutathione S-transferase F11,
ARABIDOPSIS
GLUTATHIONE-S-TRANSFERASE 6,
glutathione S-transferase F11		 0.52 0.3 -0.33
63 AT4G39240 Galactose oxidase/kelch repeat superfamily protein 0.52 0.3 -0.31
64 AT2G38840 Guanylate-binding family protein 0.51 0.31 -0.32
65 AT4G28610 phosphate starvation response 1 AtPHR1, phosphate starvation
response 1		 -0.51 0.29 -0.3
66 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 0.51 0.31 -0.34
67 AT5G46795 microspore-specific promoter 2 microspore-specific promoter 2 -0.51 0.32 -0.34
68 AT5G52330 TRAF-like superfamily protein -0.51 0.31 -0.32
69 AT3G21600 Senescence/dehydration-associated protein-related 0.51 0.31 -0.32
70 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE 0.51 0.34 -0.35
71 AT1G72350 MADS-box transcription factor family protein -0.5 0.34 -0.33
72 AT5G26620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits
to 48 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.5 0.29 -0.32
73 AT2G16910 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ABORTED MICROSPORES -0.49 0.29 -0.33
74 AT3G31340 transposable element gene -0.49 0.32 -0.33
75 AT3G07150 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.31 -0.31
76 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 -0.49 0.31 -0.3