AT1G13220 : CROWDED NUCLEI 2
Query Information
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AGICode AT1G13220
Description nuclear matrix constituent protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13220 nuclear matrix constituent protein-related CROWDED NUCLEI 2, LITTLE NUCLEI2 1 0.31 -0.3
2 AT5G44740 Y-family DNA polymerase H Y-family DNA polymerase H 0.67 0.33 -0.34
3 AT2G48020 Major facilitator superfamily protein -0.66 0.32 -0.32
4 AT5G49160 methyltransferase 1 DECREASED DNA METHYLATION 2, DNA
METHYLTRANSFERASE 01, DNA
METHYLTRANSFERASE 1,
methyltransferase 1,
METHYLTRANSFERASE 2,
METHYLTRANSFERASE I		 0.65 0.32 -0.32
5 AT5G37510 NADH-ubiquinone dehydrogenase, mitochondrial, putative CI76, embryo defective 1467 -0.64 0.33 -0.32
6 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 0.62 0.31 -0.32
7 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor 0.61 0.3 -0.31
8 AT3G23550 MATE efflux family protein -0.59 0.33 -0.31
9 AT5G42740 Sugar isomerase (SIS) family protein -0.59 0.32 -0.31
10 AT1G16810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1754, eukaryotic (InterPro:IPR013865);
Has 395 Blast hits to 394 proteins in 162 species: Archae -
0; Bacteria - 0; Metazoa - 181; Fungi - 91; Plants - 65;
Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).		 0.57 0.32 -0.33
11 AT4G11010 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 -0.57 0.31 -0.32
12 AT2G31490 unknown protein; Has 55 Blast hits to 55 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.31
13 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.57 0.32 -0.33
14 AT2G38500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.56 0.3 -0.32
15 AT2G20720 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.31 -0.32
16 AT5G35660 Glycine-rich protein family -0.55 0.32 -0.33
17 AT3G45820 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.32 -0.3
18 AT3G06910 UB-like protease 1A AtULP1a, ESD4-LIKE SUMO PROTEASE
1, UB-like protease 1A		 0.54 0.32 -0.33
19 AT4G02490 transposable element gene -0.54 0.29 -0.33
20 AT3G28310 Protein of unknown function (DUF677) 0.54 0.3 -0.34
21 AT1G70895 CLAVATA3/ESR-RELATED 17 CLAVATA3/ESR-RELATED 17 0.54 0.32 -0.29
22 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 -0.53 0.3 -0.31
23 AT3G53910 malate dehydrogenase-related 0.53 0.29 -0.32
24 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 0.53 0.33 -0.32
25 AT5G25750 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.52 0.34 -0.3
26 AT2G10450 14-3-3 family protein -0.52 0.32 -0.31
27 AT3G45120 transposable element gene -0.52 0.32 -0.3
28 AT5G65160 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat 14 -0.51 0.3 -0.31
29 AT3G42590 transposable element gene 0.51 0.32 -0.31
30 AT1G06070 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.51 0.32 -0.34
31 AT3G53840 Protein kinase superfamily protein 0.5 0.3 -0.33
32 AT5G24480 Beta-galactosidase related protein 0.5 0.29 -0.32
33 AT3G19940 Major facilitator superfamily protein -0.5 0.3 -0.33
34 AT2G22250 aspartate aminotransferase aspartate aminotransferase,
ASPARTATE AMINOTRANSFERASE,
MATERNAL EFFECT EMBRYO ARREST 17		 -0.5 0.3 -0.31
35 AT4G05230 Ubiquitin-like superfamily protein 0.5 0.29 -0.32
36 AT2G39550 Prenyltransferase family protein GERANYLGERANYLTRANSFERASE-I BETA
SUBUNIT, GGB, PGGT-I		 -0.49 0.31 -0.32
37 AT3G28830 Protein of unknown function (DUF1216) 0.49 0.31 -0.31
38 AT2G43900 Endonuclease/exonuclease/phosphatase family protein 0.49 0.32 -0.32
39 AT2G28270 Cysteine/Histidine-rich C1 domain family protein -0.49 0.34 -0.33
40 AT2G05090 transposable element gene 0.47 0.31 -0.34
41 AT3G22710 F-box family protein 0.47 0.33 -0.32
42 AT1G14770 RING/FYVE/PHD zinc finger superfamily protein 0.47 0.32 -0.33