AGICode | AT1G11710 |
Description | Pentatricopeptide repeat (PPR) superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G11710 | Pentatricopeptide repeat (PPR) superfamily protein | 1 | 0.31 | -0.33 | |||
2 | AT1G48750 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.75 | 0.33 | -0.32 | |||
3 | AT3G56700 | fatty acid reductase 6 | AtFAR6, fatty acid reductase 6 | -0.7 | 0.31 | -0.33 | ||
4 | AT5G46270 | Disease resistance protein (TIR-NBS-LRR class) family | 0.68 | 0.31 | -0.31 | |||
5 | AT2G46060 | transmembrane protein-related | 0.68 | 0.32 | -0.29 | |||
6 | AT1G56450 | 20S proteasome beta subunit G1 | 20S proteasome beta subunit G1 | -0.68 | 0.32 | -0.32 | ||
7 | AT3G60630 | GRAS family transcription factor | ARABIDOPSIS THALIANA HAIRY MERISTEM 2, HAIRY MERISTEM 2, LOST MERISTEMS 2 |
0.67 | 0.29 | -0.32 | ||
8 | AT5G19070 | SNARE associated Golgi protein family | -0.67 | 0.32 | -0.31 | |||
9 | AT5G58150 | Leucine-rich repeat protein kinase family protein | 0.67 | 0.35 | -0.3 | |||
10 | AT3G17100 | sequence-specific DNA binding transcription factors | -0.66 | 0.32 | -0.31 | |||
11 | AT1G74330 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.3 | |||
12 | AT2G15270 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). |
-0.65 | 0.33 | -0.34 | |||
13 | AT1G02410 | cytochrome c oxidase assembly protein CtaG / Cox11 family | -0.65 | 0.31 | -0.33 | |||
14 | AT3G43670 | Copper amine oxidase family protein | 0.64 | 0.31 | -0.32 | |||
15 | AT5G01740 | Nuclear transport factor 2 (NTF2) family protein | 0.64 | 0.32 | -0.3 | |||
16 | AT1G31630 | AGAMOUS-like 86 | AGAMOUS-like 86 | -0.64 | 0.3 | -0.33 | ||
17 | AT1G66090 | Disease resistance protein (TIR-NBS class) | -0.63 | 0.3 | -0.3 | |||
18 | AT5G41350 | RING/U-box superfamily protein | -0.63 | 0.33 | -0.3 | |||
19 | AT3G19870 | unknown protein; Has 84 Blast hits to 64 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
0.63 | 0.33 | -0.3 | |||
20 | AT2G17380 | associated protein 19 | associated protein 19 | -0.63 | 0.32 | -0.32 | ||
21 | AT1G66100 | Plant thionin | -0.63 | 0.32 | -0.32 | |||
22 | AT5G03030 | Chaperone DnaJ-domain superfamily protein | -0.63 | 0.32 | -0.32 | |||
23 | AT5G21060 | Glyceraldehyde-3-phosphate dehydrogenase-like family protein |
-0.62 | 0.31 | -0.31 | |||
24 | AT4G29040 | regulatory particle AAA-ATPase 2A | regulatory particle AAA-ATPase 2A | -0.62 | 0.32 | -0.31 | ||
25 | AT5G59780 | myb domain protein 59 | MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, myb domain protein 59 |
0.62 | 0.32 | -0.32 | ||
26 | AT2G44680 | casein kinase II beta subunit 4 | casein kinase II beta subunit 4 | -0.62 | 0.3 | -0.3 | ||
27 | AT2G38880 | nuclear factor Y, subunit B1 | HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, NUCLEAR FACTOR Y SUBUNIT B1, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3A, nuclear factor Y, subunit B1 |
-0.62 | 0.32 | -0.32 | ||
28 | AT5G24360 | inositol requiring 1-1 | ARABIDOPSIS THALIANA INOSITOL REQUIRING 1-1, AtIRE1b, inositol requiring 1-1 |
-0.62 | 0.29 | -0.32 | ||
29 | AT3G55100 | ABC-2 type transporter family protein | ATP-binding cassette G17 | -0.62 | 0.3 | -0.32 | ||
30 | AT1G78895 | Reticulon family protein | -0.62 | 0.32 | -0.31 | |||
31 | AT3G62790 | NADH-ubiquinone oxidoreductase-related | -0.61 | 0.33 | -0.33 | |||
32 | AT5G15870 | glycosyl hydrolase family 81 protein | -0.61 | 0.31 | -0.34 | |||
33 | AT5G36290 | Uncharacterized protein family (UPF0016) | -0.61 | 0.33 | -0.3 | |||
34 | AT4G36380 | Cytochrome P450 superfamily protein | ROTUNDIFOLIA 3 | 0.61 | 0.32 | -0.3 | ||
35 | AT3G10620 | nudix hydrolase homolog 26 | nudix hydrolase homolog 26, nudix hydrolase homolog 26 |
-0.61 | 0.32 | -0.3 | ||
36 | AT1G51690 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
-0.61 | 0.33 | -0.32 | ||
37 | AT3G31360 | transposable element gene | 0.61 | 0.32 | -0.3 | |||
38 | AT2G38590 | F-box and associated interaction domains-containing protein | 0.61 | 0.31 | -0.29 | |||
39 | AT5G26990 | Drought-responsive family protein | -0.6 | 0.3 | -0.33 | |||
40 | AT5G23570 | XS domain-containing protein / XS zinc finger domain-containing protein-related |
SUPPRESSOR OF GENE SILENCING 3, SUPPRESSOR OF GENE SILENCING 3 |
0.6 | 0.32 | -0.31 | ||
41 | AT4G23840 | Leucine-rich repeat (LRR) family protein | 0.6 | 0.32 | -0.32 | |||
42 | AT2G44980 | SNF2 domain-containing protein / helicase domain-containing protein |
ALTERED SEED GERMINATION 3 | 0.6 | 0.32 | -0.33 | ||
43 | AT3G20570 | early nodulin-like protein 9 | AtENODL9, early nodulin-like protein 9 |
-0.59 | 0.32 | -0.32 | ||
44 | AT1G28250 | unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.33 | |||
45 | AT1G64100 | pentatricopeptide (PPR) repeat-containing protein | 0.59 | 0.34 | -0.33 | |||
46 | AT1G52500 | MUTM homolog-1 | A. THALIANA FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 2, MUTM homolog-1, ATMMH-2, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 2, MUTM homolog-1, MMH-2 |
0.59 | 0.31 | -0.31 | ||
47 | AT2G19560 | proteasome family protein | AtTHP1, ENHANCED ETHYLENE RESPONSE 5, ectopic expression of seed storage proteins 1 |
-0.59 | 0.34 | -0.32 | ||
48 | AT2G26380 | Leucine-rich repeat (LRR) family protein | -0.59 | 0.32 | -0.33 | |||
49 | AT4G17080 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
0.58 | 0.31 | -0.31 | |||
50 | AT4G36500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.31 | |||
51 | AT1G75290 | NAD(P)-binding Rossmann-fold superfamily protein | -0.58 | 0.32 | -0.31 | |||
52 | AT1G49030 | PLAC8 family protein | 0.58 | 0.3 | -0.31 | |||
53 | AT2G18770 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.58 | 0.31 | -0.33 | |||
54 | AT1G34780 | APR-like 4 | APR-like 4, APR-like 4 | -0.58 | 0.33 | -0.32 | ||
55 | AT5G39700 | myb domain protein 89 | myb domain protein 89, myb domain protein 89 |
0.58 | 0.31 | -0.3 | ||
56 | AT5G13610 | Protein of unknown function (DUF155) | -0.58 | 0.3 | -0.31 | |||
57 | AT1G55450 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.57 | 0.3 | -0.32 | |||
58 | AT5G39660 | cycling DOF factor 2 | cycling DOF factor 2 | -0.57 | 0.33 | -0.3 | ||
59 | AT5G06500 | AGAMOUS-like 96 | AGAMOUS-like 96 | 0.57 | 0.32 | -0.31 | ||
60 | AT5G54130 | Calcium-binding endonuclease/exonuclease/phosphatase family | 0.57 | 0.32 | -0.3 | |||
61 | AT5G05750 | DNAJ heat shock N-terminal domain-containing protein | -0.57 | 0.32 | -0.3 | |||
62 | AT5G26270 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
63 | AT4G18080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.57 | 0.31 | -0.3 | |||
64 | AT2G32140 | transmembrane receptors | -0.57 | 0.32 | -0.29 | |||
65 | AT5G62250 | microtubule-associated protein 65-9 | microtubule-associated protein 65-9 |
-0.57 | 0.31 | -0.32 | ||
66 | AT1G68230 | Reticulon family protein | -0.57 | 0.31 | -0.31 | |||
67 | AT5G37710 | alpha/beta-Hydrolases superfamily protein | 0.56 | 0.32 | -0.33 | |||
68 | AT1G78090 | trehalose-6-phosphate phosphatase | Arabidopsis thaliana trehalose-6-phosphate phosphatase B, trehalose-6-phosphate phosphatase B |
0.56 | 0.3 | -0.34 | ||
69 | AT2G23180 | cytochrome P450, family 96, subfamily A, polypeptide 1 | cytochrome P450, family 96, subfamily A, polypeptide 1 |
0.55 | 0.32 | -0.3 | ||
70 | AT3G54220 | GRAS family transcription factor | SCARECROW, SHOOT GRAVITROPISM 1 | 0.55 | 0.3 | -0.31 | ||
71 | AT5G65630 | global transcription factor group E7 | global transcription factor group E7 |
0.54 | 0.32 | -0.3 | ||
72 | AT2G04060 | glycosyl hydrolase family 35 protein | 0.54 | 0.29 | -0.31 | |||
73 | AT1G56010 | NAC domain containing protein 1 | Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22, NAC domain containing protein 1 |
0.54 | 0.32 | -0.35 | ||
74 | AT2G25000 | WRKY DNA-binding protein 60 | ATWRKY60, WRKY DNA-binding protein 60 |
0.54 | 0.28 | -0.31 | ||
75 | AT2G30300 | Major facilitator superfamily protein | 0.54 | 0.32 | -0.3 | |||
76 | AT2G36440 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.32 | -0.31 | |||
77 | AT1G69720 | heme oxygenase 3 | heme oxygenase 3 | 0.53 | 0.29 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
78 | C0090 | Fructose | D-(-)-Fructose | D-Fructose | sorbitol degradation I, fructan degradation |
-0.6 | 0.34 | -0.3 | ||
79 | C0226 | Raffinose pentahydrate | D-(+)-Raffinose pentahydrate | - | galactolipid biosynthesis suppression, polysaccharide biosynthesis |
-0.58 | 0.33 | -0.32 |