AGICode | AT1G11630 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.33 | -0.31 | |||
2 | AT2G07300 | transposable element gene | -0.65 | 0.3 | -0.28 | |||
3 | AT3G60170 | transposable element gene | -0.61 | 0.31 | -0.29 | |||
4 | AT3G31380 | transposable element gene | 0.6 | 0.31 | -0.3 | |||
5 | AT2G17030 | F-box family protein with a domain of unknown function (DUF295) |
0.6 | 0.3 | -0.32 | |||
6 | AT1G70890 | MLP-like protein 43 | MLP-like protein 43 | -0.6 | 0.31 | -0.32 | ||
7 | AT1G73840 | hydroxyproline-rich glycoprotein family protein | ENHANCED SILENCING PHENOTYPE 1 | 0.59 | 0.33 | -0.31 | ||
8 | AT3G05370 | receptor like protein 31 | receptor like protein 31, receptor like protein 31 |
-0.58 | 0.33 | -0.33 | ||
9 | AT2G34740 | Protein phosphatase 2C family protein | 0.58 | 0.3 | -0.33 | |||
10 | AT3G42880 | Leucine-rich repeat protein kinase family protein | 0.57 | 0.32 | -0.32 | |||
11 | AT1G23650 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.32 | -0.3 | |||
12 | AT2G13270 | transposable element gene | 0.57 | 0.3 | -0.33 | |||
13 | AT2G46360 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.33 | |||
14 | AT2G26720 | Cupredoxin superfamily protein | -0.56 | 0.33 | -0.34 | |||
15 | AT3G27520 | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
16 | AT3G24130 | Pectin lyase-like superfamily protein | -0.55 | 0.31 | -0.29 | |||
17 | AT3G25160 | ER lumen protein retaining receptor family protein | 0.55 | 0.31 | -0.33 | |||
18 | AT1G48820 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.55 | 0.32 | -0.28 | |||
19 | AT3G22231 | pathogen and circadian controlled 1 | PATHOGEN AND CIRCADIAN CONTROLLED 1 |
-0.55 | 0.33 | -0.31 | ||
20 | AT5G15250 | FTSH protease 6 | ATFTSH6, FTSH protease 6 | -0.54 | 0.3 | -0.32 | ||
21 | AT1G70470 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.54 | 0.31 | -0.32 | |||
22 | AT3G03570 | Protein of unknown function (DUF3550/UPF0682) | 0.54 | 0.29 | -0.33 | |||
23 | AT3G01020 | ISCU-like 2 | ISCU-LIKE 2, ISCU-like 2 | 0.54 | 0.31 | -0.31 | ||
24 | AT2G23240 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4b |
0.54 | 0.32 | -0.31 | ||
25 | AT1G53770 | O-fucosyltransferase family protein | 0.53 | 0.31 | -0.31 | |||
26 | AT2G07230 | transposable element gene | 0.53 | 0.31 | -0.32 | |||
27 | AT5G59305 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.53 | 0.31 | -0.29 | |||
28 | AT2G36180 | EF hand calcium-binding protein family | 0.52 | 0.29 | -0.3 | |||
29 | AT5G46850 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.52 | 0.32 | -0.33 | |||
30 | AT5G06070 | C2H2 and C2HC zinc fingers superfamily protein | RAB, RABBIT EARS | 0.52 | 0.3 | -0.33 | ||
31 | AT1G80020 | transposable element gene | -0.52 | 0.32 | -0.31 | |||
32 | AT5G56470 | FAD-dependent oxidoreductase family protein | 0.52 | 0.32 | -0.32 | |||
33 | AT3G19140 | RING/U-box superfamily protein | DAY NEUTRAL FLOWERING | -0.52 | 0.32 | -0.32 | ||
34 | AT5G60220 | tetraspanin4 | tetraspanin4 | 0.51 | 0.32 | -0.32 | ||
35 | AT1G66530 | Arginyl-tRNA synthetase, class Ic | -0.51 | 0.33 | -0.29 | |||
36 | AT2G42030 | RING/U-box superfamily protein | 0.51 | 0.31 | -0.31 | |||
37 | AT2G31380 | salt tolerance homologue | salt tolerance homologue | -0.5 | 0.3 | -0.31 | ||
38 | AT4G07480 | transposable element gene | -0.5 | 0.31 | -0.3 | |||
39 | AT5G65160 | tetratricopeptide repeat (TPR)-containing protein | tetratricopeptide repeat 14 | 0.5 | 0.32 | -0.34 | ||
40 | AT2G24340 | sequence-specific DNA binding transcription factors | -0.5 | 0.32 | -0.33 | |||
41 | AT1G66460 | Protein kinase superfamily protein | -0.5 | 0.32 | -0.31 | |||
42 | AT3G61090 | Putative endonuclease or glycosyl hydrolase | -0.5 | 0.31 | -0.34 | |||
43 | AT1G21850 | SKU5 similar 8 | SKU5 similar 8 | 0.49 | 0.31 | -0.33 | ||
44 | AT4G02490 | transposable element gene | 0.49 | 0.3 | -0.33 | |||
45 | AT4G05510 | transposable element gene | 0.49 | 0.32 | -0.32 | |||
46 | AT3G22240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.32 | -0.34 | |||
47 | AT4G00030 | Plastid-lipid associated protein PAP / fibrillin family protein |
-0.49 | 0.3 | -0.31 | |||
48 | AT1G33817 | transposable element gene | 0.49 | 0.31 | -0.31 | |||
49 | AT4G25160 | U-box domain-containing protein kinase family protein | 0.48 | 0.3 | -0.29 | |||
50 | AT4G36440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.31 | -0.31 | |||
51 | AT1G36000 | LOB domain-containing protein 5 | LOB domain-containing protein 5 | -0.48 | 0.29 | -0.32 | ||
52 | AT1G80140 | Pectin lyase-like superfamily protein | 0.48 | 0.31 | -0.31 | |||
53 | AT5G28490 | Protein of unknown function (DUF640) | LIGHT-DEPENDENT SHORT HYPOCOTYLS 1, ORGAN BOUNDARY 2 |
-0.48 | 0.32 | -0.3 | ||
54 | AT3G04100 | AGAMOUS-like 57 | AGAMOUS-like 57 | -0.47 | 0.31 | -0.31 | ||
55 | AT4G38760 | Protein of unknown function (DUF3414) | -0.46 | 0.34 | -0.32 | |||
56 | AT5G17320 | homeodomain GLABROUS 9 | homeodomain GLABROUS 9 | -0.46 | 0.33 | -0.33 | ||
57 | AT1G70000 | myb-like transcription factor family protein | -0.46 | 0.31 | -0.32 | |||
58 | AT3G27785 | myb domain protein 118 | ATMYB118, myb domain protein 118, PLANT GROWTH ACTIVATOR 37 |
-0.46 | 0.31 | -0.31 | ||
59 | AT1G73000 | PYR1-like 3 | PYR1-like 3, regulatory components of ABA receptor 13 |
-0.45 | 0.33 | -0.31 | ||
60 | AT5G22875 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.45 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
61 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.79 | 0.42 | -0.46 | ||
62 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | 0.73 | 0.47 | -0.43 | ||
63 | C0116 | Hydroxylamine | - | Hydroxylamine | - | -0.59 | 0.45 | -0.47 | ||
64 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.58 | 0.32 | -0.31 | ||
65 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
0.57 | 0.29 | -0.3 | ||
66 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.53 | 0.32 | -0.3 | ||
67 | C0112 | Histidine | L-Histidine | L-Histidine | tRNA charging, histidine biosynthesis |
0.52 | 0.29 | -0.32 | ||
68 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
0.52 | 0.31 | -0.31 | ||
69 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
0.49 | 0.32 | -0.32 |