AT1G11750 : CLP protease proteolytic subunit 6
Query Information
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AGICode AT1G11750
Description CLP protease proteolytic subunit 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 1 0.35 -0.31
2 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 0.9 0.3 -0.32
3 AT2G38270 CAX-interacting protein 2 GLUTAREDOXIN, CAX-interacting
protein 2		 0.89 0.31 -0.32
4 AT2G21170 triosephosphate isomerase PLASTID ISOFORM TRIOSE PHOSPHATE
ISOMERASE, triosephosphate
isomerase		 0.89 0.34 -0.31
5 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 0.88 0.32 -0.33
6 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.87 0.33 -0.3
7 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.87 0.32 -0.32
8 AT2G20270 Thioredoxin superfamily protein 0.87 0.32 -0.32
9 AT4G33680 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 ABERRANT GROWTH AND DEATH 2 0.85 0.32 -0.31
10 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.85 0.33 -0.32
11 AT4G33520 P-type ATP-ase 1 Arabidopsis thaliana heavy metal
ATPase 6, HEAVY METAL ATPASE 6,
P-type ATP-ase 1		 0.83 0.29 -0.31
12 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.83 0.3 -0.29
13 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.83 0.31 -0.31
14 AT4G25370 Double Clp-N motif protein 0.83 0.31 -0.35
15 AT4G22310 Uncharacterised protein family (UPF0041) 0.82 0.33 -0.33
16 AT5G13120 cyclophilin 20-2 ARABIDOPSIS THALIANA CYCLOPHILIN
20-2, cyclophilin 20-2,
Photosynthetic NDH subcomplex L 5		 0.81 0.29 -0.31
17 AT5G06580 FAD-linked oxidases family protein 0.81 0.33 -0.33
18 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.81 0.3 -0.32
19 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.3 -0.32
20 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.8 0.32 -0.3
21 AT5G40160 Ankyrin repeat family protein EMBRYO DEFECTIVE 139, embryo
defective 506		 0.8 0.33 -0.31
22 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 0.79 0.3 -0.31
23 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.32 -0.31
24 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.79 0.32 -0.3
25 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.79 0.32 -0.34
26 AT1G50320 thioredoxin X thioredoxin X, THIOREDOXIN X,
thioredoxin X		 0.79 0.31 -0.31
27 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.78 0.32 -0.31
28 AT5G47870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 radiation sensitive 51-2, RAD52-2B 0.78 0.32 -0.32
29 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.77 0.32 -0.31
30 AT1G48520 GLU-ADT subunit B GLU-ADT subunit B 0.77 0.32 -0.32
31 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.31 -0.31
32 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.77 0.32 -0.33
33 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein embryo sac development arrest 3 0.77 0.3 -0.32
34 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.77 0.33 -0.32
35 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.77 0.32 -0.32
36 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.77 0.33 -0.3
37 AT4G12060 Double Clp-N motif protein 0.76 0.3 -0.32
38 AT4G32590 2Fe-2S ferredoxin-like superfamily protein 0.76 0.31 -0.31
39 AT2G20875 epidermal patterning factor 1 EPIDERMAL PATTERNING FACTOR 1 0.76 0.31 -0.33
40 AT2G04360 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.76 0.29 -0.31
41 AT5G63890 histidinol dehydrogenase histidinol dehydrogenase,
histidinol dehydrogenase,
HISTIDINE BIOSYNTHESIS 8		 0.76 0.33 -0.32
42 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 0.76 0.31 -0.33
43 AT1G66670 CLP protease proteolytic subunit 3 CLP protease proteolytic subunit
3, NCLPP3		 0.76 0.32 -0.32
44 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1517 (InterPro:IPR010903);
Has 276 Blast hits to 275 proteins in 83 species: Archae -
0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).		 0.76 0.33 -0.31
45 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.76 0.32 -0.3
46 AT1G67280 Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily protein		 0.76 0.31 -0.34
47 AT3G11630 Thioredoxin superfamily protein 0.76 0.34 -0.32
48 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.76 0.3 -0.32
49 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.75 0.3 -0.32
50 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.75 0.3 -0.31
51 AT2G43750 O-acetylserine (thiol) lyase B ARABIDOPSIS CYSTEINE SYNTHASE 1,
ARABIDOPSIS THALIANA CYSTEIN
SYNTHASE-B, CHLOROPLAST
O-ACETYLSERINE SULFHYDRYLASE 1,
O-acetylserine (thiol) lyase B		 0.75 0.33 -0.33
52 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.75 0.29 -0.3
53 AT1G26160 Metal-dependent phosphohydrolase 0.75 0.33 -0.31
54 AT3G50790 esterase/lipase/thioesterase family protein 0.75 0.31 -0.33
55 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.75 0.3 -0.32
56 AT2G30320 Pseudouridine synthase family protein 0.75 0.3 -0.3
57 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.74 0.31 -0.33
58 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 0.74 0.32 -0.32
59 AT5G18430 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.33 -0.33
60 AT1G01090 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha 0.74 0.33 -0.31
61 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 0.74 0.31 -0.31
62 AT2G15290 translocon at inner membrane of chloroplasts 21 TRANSLOCON AT INNER MEMBRANE OF
CHLOROPLASTS 21, CHLOROPLAST
IMPORT APPARATUS 5, PERMEASE IN
CHLOROPLASTS 1, translocon at
inner membrane of chloroplasts 21		 0.74 0.32 -0.31
63 AT2G19790 SNARE-like superfamily protein 0.74 0.31 -0.32
64 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.35 -0.31
65 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 0.73 0.3 -0.31
66 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 0.73 0.31 -0.32
67 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 0.73 0.3 -0.31
68 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.73 0.31 -0.33
69 AT3G53560 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.32
70 AT5G47435 formyltetrahydrofolate deformylase, putative 0.73 0.3 -0.33
71 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.34 -0.31
72 AT5G03040 IQ-domain 2 IQ-domain 2 0.73 0.3 -0.3
73 AT1G21740 Protein of unknown function (DUF630 and DUF632) -0.73 0.3 -0.31
74 AT1G61780 postsynaptic protein-related 0.73 0.3 -0.32
75 AT5G64480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.73 0.32 -0.32
76 AT1G48450 Protein of unknown function (DUF760) 0.73 0.33 -0.3
77 AT5G19370 rhodanese-like domain-containing protein / PPIC-type PPIASE
domain-containing protein		 0.72 0.31 -0.32
78 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.3 -0.31
79 AT3G18420 Protein prenylyltransferase superfamily protein 0.72 0.32 -0.31
80 AT5G41480 Folylpolyglutamate synthetase family protein A. THALIANA DHFS-FPGS HOMOLOG A,
DHFS-FPGS HOMOLOG A, EMBRYO
DEFECTIVE 9, GLOBULAR ARREST1		 0.72 0.31 -0.3
81 AT5G20140 SOUL heme-binding family protein 0.72 0.32 -0.31
82 AT5G17560 BolA-like family protein 0.72 0.31 -0.33
83 AT1G80080 Leucine-rich repeat (LRR) family protein Receptor Like Protein 17, TOO MANY
MOUTHS		 0.72 0.35 -0.31
84 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.72 0.32 -0.31
85 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 0.72 0.33 -0.32
86 AT3G56840 FAD-dependent oxidoreductase family protein 0.71 0.32 -0.32
87 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.71 0.31 -0.31
88 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2		 0.71 0.3 -0.32
89 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1		 0.71 0.31 -0.33
90 AT1G11420 DOMAIN OF UNKNOWN FUNCTION 724 2 DOMAIN OF UNKNOWN FUNCTION 724 2,
DOMAIN OF UNKNOWN FUNCTION 724 2		 -0.69 0.31 -0.32
91 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.68 0.3 -0.33
92 AT3G26550 Cysteine/Histidine-rich C1 domain family protein -0.67 0.31 -0.3
93 AT5G52170 homeodomain GLABROUS 7 homeodomain GLABROUS 7 -0.67 0.33 -0.29
94 AT3G26870 Plant self-incompatibility protein S1 family -0.67 0.32 -0.31
95 AT3G27473 Cysteine/Histidine-rich C1 domain family protein -0.66 0.33 -0.31
96 AT2G38370 Plant protein of unknown function (DUF827) -0.65 0.32 -0.31
97 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.64 0.3 -0.3
98 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.64 0.32 -0.31
99 AT1G31950 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.64 0.32 -0.33
100 AT1G13970 Protein of unknown function (DUF1336) -0.63 0.32 -0.31
101 AT2G45830 downstream target of AGL15 2 downstream target of AGL15 2 -0.63 0.29 -0.32
102 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.63 0.32 -0.33
103 AT4G31910 HXXXD-type acyl-transferase family protein -0.63 0.31 -0.34
104 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.63 0.33 -0.32
105 AT3G48410 alpha/beta-Hydrolases superfamily protein -0.62 0.31 -0.32
106 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.62 0.33 -0.3
107 AT2G39370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits
to 178 proteins in 53 species: Archae - 0; Bacteria - 58;
Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 4		 -0.62 0.34 -0.31
108 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.61 0.31 -0.32
109 AT2G32280 Protein of unknown function (DUF1218) -0.61 0.3 -0.31
110 AT1G64320 myosin heavy chain-related -0.6 0.33 -0.33
111 AT4G22770 AT hook motif DNA-binding family protein -0.6 0.33 -0.34
112 AT1G34110 Leucine-rich receptor-like protein kinase family protein -0.6 0.3 -0.32
113 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.6 0.32 -0.32
114 AT1G80240 Protein of unknown function, DUF642 -0.59 0.34 -0.3
115 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.29 -0.31
116 AT5G47750 D6 protein kinase like 2 D6 protein kinase like 2, PK5 -0.57 0.3 -0.33
117 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 -0.56 0.32 -0.31
118 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.56 0.31 -0.34
119 AT5G09290 Inositol monophosphatase family protein -0.55 0.31 -0.32
120 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.3 -0.31
121 AT4G13030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.31 -0.33
122 AT1G64830 Eukaryotic aspartyl protease family protein -0.54 0.29 -0.32
123 AT1G44160 HSP40/DnaJ peptide-binding protein -0.54 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0230 Rutin - - polyphenol biosynthesis -0.68 0.45 -0.41