AT1G59840 : cofactor assembly of complex C
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G59840
Description cofactor assembly of complex C
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 1 0.34 -0.32
2 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.93 0.32 -0.3
3 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.92 0.31 -0.34
4 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.91 0.31 -0.33
5 AT5G65220 Ribosomal L29 family protein 0.91 0.3 -0.31
6 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.91 0.3 -0.33
7 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.91 0.32 -0.3
8 AT3G29185 Domain of unknown function (DUF3598) 0.91 0.29 -0.3
9 AT5G39210 chlororespiratory reduction 7 CHLORORESPIRATORY REDUCTION 7 0.91 0.33 -0.3
10 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.91 0.31 -0.31
11 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.33 -0.31
12 AT1G14270 CAAX amino terminal protease family protein 0.91 0.31 -0.29
13 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.9 0.34 -0.32
14 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.9 0.33 -0.32
15 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.9 0.3 -0.32
16 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.9 0.3 -0.34
17 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.9 0.33 -0.33
18 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.32 -0.3
19 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.9 0.31 -0.32
20 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.32 -0.31
21 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.9 0.34 -0.3
22 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.9 0.32 -0.32
23 AT1G49380 cytochrome c biogenesis protein family 0.9 0.32 -0.33
24 AT2G18710 SECY homolog 1 SECY homolog 1 0.9 0.33 -0.31
25 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.34 -0.3
26 AT1G76450 Photosystem II reaction center PsbP family protein 0.89 0.32 -0.33
27 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.89 0.31 -0.32
28 AT3G54210 Ribosomal protein L17 family protein 0.89 0.3 -0.3
29 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.89 0.31 -0.3
30 AT2G33450 Ribosomal L28 family 0.89 0.33 -0.33
31 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.89 0.34 -0.32
32 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.89 0.32 -0.31
33 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.89 0.3 -0.3
34 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.89 0.31 -0.32
35 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.89 0.29 -0.31
36 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.89 0.31 -0.31
37 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.89 0.32 -0.33
38 AT5G52970 thylakoid lumen 15.0 kDa protein 0.89 0.32 -0.3
39 AT5G46420 16S rRNA processing protein RimM family 0.89 0.33 -0.33
40 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.88 0.3 -0.32
41 AT5G47190 Ribosomal protein L19 family protein 0.88 0.31 -0.32
42 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.88 0.29 -0.3
43 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.88 0.32 -0.31
44 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.88 0.33 -0.34
45 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.88 0.32 -0.3
46 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.88 0.32 -0.32
47 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.33 -0.3
48 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.88 0.32 -0.33
49 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.88 0.33 -0.28
50 AT5G07020 proline-rich family protein 0.88 0.33 -0.3
51 AT1G64150 Uncharacterized protein family (UPF0016) 0.88 0.32 -0.32
52 AT4G04350 tRNA synthetase class I (I, L, M and V) family protein EMBRYO DEFECTIVE 2369 0.88 0.3 -0.32
53 AT5G55220 trigger factor type chaperone family protein 0.88 0.3 -0.31
54 AT3G20230 Ribosomal L18p/L5e family protein 0.88 0.32 -0.34
55 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.88 0.32 -0.3
56 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.88 0.34 -0.32
57 AT1G29070 Ribosomal protein L34 0.88 0.32 -0.3
58 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.88 0.33 -0.31
59 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.88 0.33 -0.3
60 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.88 0.32 -0.33
61 AT1G68780 RNI-like superfamily protein 0.87 0.31 -0.3
62 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.87 0.31 -0.32
63 AT2G28605 Photosystem II reaction center PsbP family protein 0.87 0.31 -0.3
64 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.87 0.31 -0.32
65 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.87 0.29 -0.29
66 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.87 0.33 -0.31
67 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.33 -0.33
68 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.86 0.32 -0.31
69 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.86 0.31 -0.32
70 AT5G16390 chloroplastic acetylcoenzyme A carboxylase 1 BIOTIN CARBOXYL CARRIER PROTEIN,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
chloroplastic acetylcoenzyme A
carboxylase 1, CAC1-A, CAC1A		 0.86 0.33 -0.3
71 AT3G25660 Amidase family protein 0.86 0.31 -0.31
72 AT3G18390 CRS1 / YhbY (CRM) domain-containing protein embryo defective 1865 0.86 0.29 -0.33
73 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 0.86 0.32 -0.3
74 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.86 0.3 -0.32
75 AT4G17560 Ribosomal protein L19 family protein 0.86 0.33 -0.34
76 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.86 0.31 -0.31
77 AT2G26550 heme oxygenase 2 heme oxygenase 2 0.86 0.31 -0.33
78 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.86 0.31 -0.3
79 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.86 0.32 -0.3
80 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.86 0.32 -0.31
81 AT4G10300 RmlC-like cupins superfamily protein 0.86 0.32 -0.32
82 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 0.86 0.32 -0.32
83 AT5G52100 Dihydrodipicolinate reductase, bacterial/plant chlororespiration reduction 1 0.86 0.32 -0.33
84 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.33 -0.32
85 AT4G18360 Aldolase-type TIM barrel family protein -0.82 0.32 -0.32
86 AT3G25290 Auxin-responsive family protein -0.82 0.32 -0.33
87 AT5G10820 Major facilitator superfamily protein -0.79 0.33 -0.31
88 AT4G39270 Leucine-rich repeat protein kinase family protein -0.79 0.33 -0.28
89 AT5G06750 Protein phosphatase 2C family protein -0.79 0.3 -0.32
90 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.78 0.33 -0.32
91 AT4G29690 Alkaline-phosphatase-like family protein -0.78 0.29 -0.31
92 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.78 0.31 -0.31
93 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.78 0.3 -0.32
94 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 -0.77 0.32 -0.32
95 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 -0.76 0.33 -0.3
96 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 -0.76 0.31 -0.32
97 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.31
98 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.33 -0.32
99 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.75 0.31 -0.31
100 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.75 0.31 -0.33
101 AT5G65020 annexin 2 annexin 2 -0.75 0.33 -0.3
102 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.73 0.32 -0.33
103 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.73 0.27 -0.29
104 AT1G08315 ARM repeat superfamily protein -0.73 0.32 -0.32
105 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 -0.73 0.32 -0.34
106 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.72 0.31 -0.29
107 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.72 0.3 -0.28
108 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 -0.72 0.32 -0.32
109 AT5G35200 ENTH/ANTH/VHS superfamily protein -0.71 0.31 -0.31
110 AT1G35140 Phosphate-responsive 1 family protein EXORDIUM like 1, PHOSPHATE-INDUCED
1		 -0.71 0.31 -0.31
111 AT5G44380 FAD-binding Berberine family protein -0.71 0.32 -0.32
112 AT3G26440 Protein of unknown function (DUF707) -0.71 0.32 -0.33
113 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.71 0.33 -0.33
114 AT3G26590 MATE efflux family protein -0.7 0.32 -0.33
115 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 -0.7 0.32 -0.32
116 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.7 0.33 -0.31
117 AT5G51500 Plant invertase/pectin methylesterase inhibitor superfamily -0.7 0.31 -0.32
118 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.7 0.32 -0.3
119 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.7 0.36 -0.3