AT1G75660 : 5'-3' EXORIBONUCLEASE 3
Query Information
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AGICode AT1G75660
Description 5'-3' exoribonuclease 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G75660 5'-3' exoribonuclease 3 5'-3' EXORIBONUCLEASE 3, 5'-3'
exoribonuclease 3		 1 0.32 -0.29
2 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 0.79 0.33 -0.32
3 AT3G13580 Ribosomal protein L30/L7 family protein 0.72 0.31 -0.3
4 AT4G29840 Pyridoxal-5'-phosphate-dependent enzyme family protein METHIONINE OVER-ACCUMULATOR 2,
THREONINE SYNTHASE		 0.72 0.32 -0.28
5 AT3G01790 Ribosomal protein L13 family protein 0.72 0.32 -0.3
6 AT2G41870 Remorin family protein -0.71 0.32 -0.32
7 AT2G36930 zinc finger (C2H2 type) family protein 0.7 0.31 -0.31
8 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.7 0.31 -0.31
9 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.7 0.31 -0.33
10 AT1G76020 Thioredoxin superfamily protein -0.69 0.32 -0.33
11 AT4G10090 elongator protein 6 elongator protein 6 0.69 0.32 -0.31
12 AT1G75580 SAUR-like auxin-responsive protein family 0.69 0.32 -0.32
13 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE 0.69 0.32 -0.33
14 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.69 0.32 -0.32
15 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 0.68 0.3 -0.31
16 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.68 0.34 -0.31
17 AT1G57870 shaggy-like kinase 42 shaggy-like kinase 42, shaggy-like
kinase 42		 -0.68 0.31 -0.31
18 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.31 -0.31
19 AT3G50850 Putative methyltransferase family protein 0.67 0.33 -0.3
20 AT2G26590 regulatory particle non-ATPase 13 regulatory particle non-ATPase 13 0.66 0.32 -0.33
21 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.34
22 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.65 0.3 -0.32
23 AT4G23600 Tyrosine transaminase family protein CORONATINE INDUCED 1, JASMONIC
ACID RESPONSIVE 2		 -0.65 0.33 -0.3
24 AT5G48120 ARM repeat superfamily protein 0.65 0.31 -0.3
25 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.31 -0.32
26 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.64 0.3 -0.33
27 AT2G15520 transposable element gene -0.64 0.32 -0.31
28 AT2G03550 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.3
29 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B 0.64 0.3 -0.3
30 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.64 0.31 -0.33
31 AT3G12570 FYD FYD 0.64 0.32 -0.3
32 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 -0.64 0.33 -0.32
33 AT4G26110 nucleosome assembly protein1;1 ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMLY PROTEIN 1;1, nucleosome
assembly protein1;1		 0.64 0.33 -0.3
34 AT3G56050 Protein kinase family protein -0.63 0.3 -0.33
35 AT1G19835 Plant protein of unknown function (DUF869) -0.63 0.32 -0.31
36 AT4G39200 Ribosomal protein S25 family protein 0.63 0.32 -0.32
37 AT4G00830 RNA-binding (RRM/RBD/RNP motifs) family protein LHP1-Interacting Factor 2 0.63 0.31 -0.31
38 AT5G49400 zinc knuckle (CCHC-type) family protein 0.63 0.31 -0.32
39 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.63 0.31 -0.31
40 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.3
41 AT2G27760 tRNAisopentenyltransferase 2 tRNAisopentenyltransferase 2,
IPPT, tRNAisopentenyltransferase 2		 0.62 0.33 -0.33
42 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.62 0.33 -0.33
43 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.32 -0.32
44 AT3G43940 unknown protein; Has 24 Blast hits to 24 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.31
45 AT2G02850 plantacyanin plantacyanin 0.61 0.32 -0.33
46 AT3G53420 plasma membrane intrinsic protein 2A PLASMA MEMBRANE INTRINSIC PROTEIN
2, PLASMA MEMBRANE INTRINSIC
PROTEIN 2;1, plasma membrane
intrinsic protein 2A		 -0.61 0.31 -0.31
47 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.6 0.32 -0.31
48 AT2G19780 Leucine-rich repeat (LRR) family protein -0.6 0.34 -0.3
49 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 -0.6 0.31 -0.33
50 AT1G69220 Protein kinase superfamily protein SIK1 0.6 0.34 -0.34
51 AT1G35220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 313
Blast hits to 185 proteins in 75 species: Archae - 0;
Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		 0.6 0.32 -0.32
52 AT5G52540 Protein of unknown function (DUF819) -0.6 0.31 -0.29
53 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.6 0.32 -0.33
54 AT5G41900 alpha/beta-Hydrolases superfamily protein -0.59 0.32 -0.3
55 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 0.59 0.33 -0.32
56 AT4G09430 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.32 -0.33
57 AT5G42820 Zinc finger C-x8-C-x5-C-x3-H type family protein ATU2AF35B, U2AF35B 0.59 0.32 -0.3
58 AT5G09770 Ribosomal protein L17 family protein 0.59 0.31 -0.3
59 AT1G61130 serine carboxypeptidase-like 32 serine carboxypeptidase-like 32 -0.58 0.3 -0.33
60 AT5G26330 Cupredoxin superfamily protein -0.58 0.31 -0.31
61 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.3
62 AT4G26390 Pyruvate kinase family protein -0.58 0.32 -0.32
63 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.58 0.3 -0.33
64 AT4G31330 Protein of unknown function, DUF599 -0.58 0.31 -0.32
65 AT1G56710 Pectin lyase-like superfamily protein -0.57 0.32 -0.31
66 AT3G01080 WRKY DNA-binding protein 58 WRKY DNA-BINDING PROTEIN 58, WRKY
DNA-binding protein 58		 -0.57 0.34 -0.3
67 AT4G17250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits
to 31 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.31
68 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 -0.55 0.31 -0.28
69 AT2G23830 PapD-like superfamily protein -0.54 0.3 -0.3
70 AT1G04660 glycine-rich protein -0.54 0.32 -0.3
71 AT1G17800 early nodulin-like protein 22 AtENODL22, early nodulin-like
protein 22		 -0.53 0.33 -0.31
72 AT3G23410 fatty alcohol oxidase 3 ARABIDOPSIS FATTY ALCOHOL OXIDASE
3, fatty alcohol oxidase 3		 -0.53 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
73 C0215 PR_MST_2527.1 - - - 0.72 0.46 -0.44
74 C0213 PR_MST_2410.2 - - - 0.62 0.42 -0.44
75 C0202 Phosphatidylglycerol-34:0 - Phosphatidylglycerol-34:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.53 0.32 -0.33