AT1G79560 : EMBRYO DEFECTIVE 1047
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G79560
Description FTSH protease 12
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 1 0.31 -0.3
2 AT1G06950 translocon at the inner envelope membrane of chloroplasts
110		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE INNER ENVELOPE MEMBRANE OF
CHLOROPLASTS 110, translocon at
the inner envelope membrane of
chloroplasts 110		 0.9 0.31 -0.3
3 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.9 0.29 -0.32
4 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.9 0.31 -0.32
5 AT4G36390 Methylthiotransferase 0.88 0.34 -0.32
6 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.88 0.31 -0.32
7 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.88 0.33 -0.33
8 AT3G21300 RNA methyltransferase family protein 0.87 0.31 -0.32
9 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.32 -0.29
10 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.87 0.32 -0.32
11 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.86 0.33 -0.32
12 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.86 0.31 -0.34
13 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.86 0.31 -0.33
14 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.86 0.31 -0.31
15 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.85 0.31 -0.31
16 AT3G48500 Nucleic acid-binding, OB-fold-like protein PIGMENT DEFECTIVE 312, PLASTID
TRANSCRIPTIONALLY ACTIVE 10		 0.85 0.32 -0.3
17 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.85 0.32 -0.31
18 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.85 0.31 -0.35
19 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.85 0.33 -0.32
20 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.84 0.34 -0.3
21 AT3G16260 tRNAse Z4 tRNAse Z4 0.84 0.32 -0.35
22 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.83 0.31 -0.3
23 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.83 0.31 -0.31
24 AT1G50000 methyltransferases 0.83 0.31 -0.32
25 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.83 0.33 -0.31
26 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.83 0.31 -0.32
27 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.82 0.33 -0.33
28 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 0.81 0.3 -0.31
29 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.81 0.31 -0.3
30 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.81 0.31 -0.27
31 AT3G23070 CRM family member 3A ATCFM3A, CRM family member 3A 0.81 0.32 -0.3
32 AT1G11870 Seryl-tRNA synthetase ATSRS, ovule abortion 7,
Seryl-tRNA synthetase		 0.8 0.32 -0.31
33 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 0.8 0.32 -0.33
34 AT3G02060 DEAD/DEAH box helicase, putative 0.8 0.32 -0.32
35 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.33 -0.3
36 AT3G16290 AAA-type ATPase family protein embryo defective 2083 0.8 0.31 -0.33
37 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.8 0.32 -0.33
38 AT3G02450 cell division protein ftsH, putative 0.79 0.32 -0.3
39 AT1G15140 FAD/NAD(P)-binding oxidoreductase 0.79 0.33 -0.3
40 AT3G29290 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2076 0.79 0.31 -0.32
41 AT2G25870 haloacid dehalogenase-like hydrolase family protein 0.79 0.31 -0.31
42 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.79 0.31 -0.3
43 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.79 0.33 -0.31
44 AT4G09730 RH39 RH39 0.79 0.31 -0.28
45 AT4G33760 tRNA synthetase class II (D, K and N) family protein 0.79 0.31 -0.33
46 AT5G55280 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 ARABIDOPSIS THALIANA HOMOLOG OF
BACTERIAL CYTOKINESIS Z-RING
PROTEIN FTSZ 1-1, CHLOROPLAST
FTSZ, homolog of bacterial
cytokinesis Z-ring protein FTSZ
1-1		 0.79 0.33 -0.33
47 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.78 0.33 -0.31
48 AT5G52010 C2H2-like zinc finger protein 0.78 0.32 -0.31
49 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 0.78 0.32 -0.31
50 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 0.78 0.29 -0.31
51 AT1G10910 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 3103 0.78 0.32 -0.34
52 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.78 0.31 -0.33
53 AT4G01610 Cysteine proteinases superfamily protein -0.78 0.32 -0.32
54 AT5G23070 Thymidine kinase 0.77 0.33 -0.33
55 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.77 0.31 -0.31
56 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.77 0.29 -0.31
57 AT4G22820 A20/AN1-like zinc finger family protein -0.77 0.34 -0.29
58 AT2G15230 lipase 1 lipase 1, lipase 1 -0.76 0.32 -0.33
59 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.76 0.32 -0.32
60 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.75 0.32 -0.34
61 AT3G11100 sequence-specific DNA binding transcription factors -0.73 0.3 -0.32
62 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.73 0.31 -0.31
63 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.72 0.31 -0.3
64 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.32 -0.31
65 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.72 0.32 -0.32
66 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.71 0.34 -0.31
67 AT5G05230 RING/U-box superfamily protein -0.71 0.32 -0.33
68 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 -0.71 0.33 -0.31
69 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.71 0.31 -0.33
70 AT5G04750 F1F0-ATPase inhibitor protein, putative -0.71 0.32 -0.32
71 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.71 0.3 -0.32
72 AT4G35110 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.71 0.32 -0.29
73 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.69 0.3 -0.32
74 AT5G10730 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.3 -0.32
75 AT5G02420 unknown protein; Has 90 Blast hits to 90 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.32
76 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 -0.69 0.33 -0.3
77 AT5G54300 Protein of unknown function (DUF761) -0.69 0.32 -0.29
78 AT3G62580 Late embryogenesis abundant protein (LEA) family protein -0.68 0.31 -0.32
79 AT3G23570 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.32
80 AT1G06630 F-box/RNI-like superfamily protein -0.68 0.33 -0.3
81 AT3G01740 Mitochondrial ribosomal protein L37 -0.67 0.3 -0.34
82 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B -0.67 0.32 -0.31
83 AT1G19230 Riboflavin synthase-like superfamily protein -0.67 0.31 -0.32
84 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 -0.66 0.32 -0.31
85 AT1G78780 pathogenesis-related family protein -0.65 0.3 -0.3
86 AT1G07870 Protein kinase superfamily protein -0.65 0.33 -0.33
87 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.65 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.87 0.45 -0.47 C0133