AT1G75560 : -
Query Information
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AGICode AT1G75560
Description zinc knuckle (CCHC-type) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G75560 zinc knuckle (CCHC-type) family protein 1 0.3 -0.32
2 AT1G67430 Ribosomal protein L22p/L17e family protein 0.92 0.32 -0.33
3 AT1G04480 Ribosomal protein L14p/L23e family protein 0.91 0.35 -0.31
4 AT3G56340 Ribosomal protein S26e family protein 0.91 0.32 -0.33
5 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.91 0.31 -0.34
6 AT3G53890 Ribosomal protein S21e 0.9 0.32 -0.31
7 AT3G09200 Ribosomal protein L10 family protein 0.9 0.31 -0.29
8 AT2G19730 Ribosomal L28e protein family 0.9 0.31 -0.3
9 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.89 0.29 -0.3
10 AT5G27770 Ribosomal L22e protein family 0.89 0.33 -0.3
11 AT3G23390 Zinc-binding ribosomal protein family protein 0.89 0.3 -0.34
12 AT5G47700 60S acidic ribosomal protein family 0.89 0.31 -0.32
13 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.89 0.3 -0.3
14 AT3G47370 Ribosomal protein S10p/S20e family protein 0.88 0.33 -0.33
15 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.88 0.33 -0.31
16 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.88 0.31 -0.3
17 AT1G48830 Ribosomal protein S7e family protein 0.88 0.32 -0.32
18 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.88 0.29 -0.31
19 AT4G16720 Ribosomal protein L23/L15e family protein 0.87 0.3 -0.32
20 AT1G34030 Ribosomal protein S13/S18 family 0.87 0.33 -0.32
21 AT5G57290 60S acidic ribosomal protein family 0.87 0.32 -0.31
22 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.87 0.33 -0.31
23 AT4G13170 Ribosomal protein L13 family protein 0.87 0.3 -0.33
24 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.32 -0.33
25 AT2G27720 60S acidic ribosomal protein family 0.86 0.3 -0.32
26 AT2G01250 Ribosomal protein L30/L7 family protein 0.86 0.31 -0.32
27 AT1G26880 Ribosomal protein L34e superfamily protein 0.86 0.3 -0.32
28 AT3G60770 Ribosomal protein S13/S15 0.86 0.29 -0.32
29 AT3G09500 Ribosomal L29 family protein 0.86 0.32 -0.29
30 AT3G04840 Ribosomal protein S3Ae 0.86 0.3 -0.32
31 AT4G14320 Zinc-binding ribosomal protein family protein 0.86 0.32 -0.31
32 AT3G06680 Ribosomal L29e protein family 0.86 0.31 -0.32
33 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.85 0.32 -0.32
34 AT5G67510 Translation protein SH3-like family protein 0.85 0.31 -0.33
35 AT4G31985 Ribosomal protein L39 family protein 0.85 0.33 -0.33
36 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.85 0.32 -0.31
37 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.85 0.32 -0.32
38 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.85 0.32 -0.31
39 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.85 0.31 -0.34
40 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.85 0.31 -0.33
41 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.85 0.32 -0.35
42 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.85 0.33 -0.31
43 AT2G44120 Ribosomal protein L30/L7 family protein 0.84 0.34 -0.33
44 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.84 0.33 -0.32
45 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.84 0.31 -0.31
46 AT4G33865 Ribosomal protein S14p/S29e family protein 0.84 0.33 -0.32
47 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.84 0.33 -0.32
48 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.31 -0.3
49 AT2G43460 Ribosomal L38e protein family 0.84 0.31 -0.31
50 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.84 0.3 -0.31
51 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.84 0.35 -0.31
52 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.84 0.33 -0.3
53 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.83 0.32 -0.35
54 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.3 -0.31
55 AT3G05560 Ribosomal L22e protein family 0.83 0.31 -0.33
56 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.83 0.3 -0.32
57 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.31 -0.32
58 AT3G02080 Ribosomal protein S19e family protein 0.83 0.3 -0.3
59 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.83 0.33 -0.32
60 AT5G56670 Ribosomal protein S30 family protein 0.83 0.33 -0.3
61 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.83 0.3 -0.32
62 AT3G52590 ubiquitin extension protein 1 EMBRYO DEFECTIVE 2167,
EARLY-RESPONSIVE TO DEHYDRATION
16, HAPLESS 4, ubiquitin extension
protein 1		 0.83 0.32 -0.33
63 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.83 0.32 -0.31
64 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.83 0.31 -0.31
65 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.82 0.34 -0.32
66 AT2G45710 Zinc-binding ribosomal protein family protein 0.82 0.3 -0.3
67 AT2G33370 Ribosomal protein L14p/L23e family protein 0.82 0.33 -0.31
68 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.31 -0.34
69 AT5G23900 Ribosomal protein L13e family protein 0.82 0.32 -0.34
70 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.82 0.3 -0.31
71 AT1G01100 60S acidic ribosomal protein family 0.82 0.3 -0.31
72 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.82 0.3 -0.31
73 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.82 0.35 -0.31
74 AT1G05055 general transcription factor II H2 ATGTF2H2, general transcription
factor II H2		 0.82 0.3 -0.3
75 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.82 0.29 -0.31
76 AT5G41970 Metal-dependent protein hydrolase 0.81 0.33 -0.32
77 AT3G07230 wound-responsive protein-related 0.81 0.35 -0.33
78 AT3G53430 Ribosomal protein L11 family protein 0.81 0.31 -0.32
79 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.81 0.31 -0.32
80 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.81 0.3 -0.32
81 AT1G74270 Ribosomal protein L35Ae family protein 0.81 0.31 -0.31
82 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.81 0.32 -0.34
83 AT5G02610 Ribosomal L29 family protein 0.81 0.3 -0.34
84 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 0.81 0.32 -0.33
85 AT3G60245 Zinc-binding ribosomal protein family protein 0.81 0.31 -0.32
86 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.81 0.34 -0.3
87 AT3G05000 Transport protein particle (TRAPP) component 0.81 0.32 -0.29
88 AT4G13600 Carbohydrate-binding X8 domain superfamily protein 0.81 0.31 -0.33
89 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.79 0.34 -0.33
90 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.31 -0.3
91 AT2G38800 Plant calmodulin-binding protein-related -0.79 0.32 -0.32
92 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.78 0.32 -0.31
93 AT3G24740 Protein of unknown function (DUF1644) -0.77 0.32 -0.32
94 AT5G28520 Mannose-binding lectin superfamily protein -0.76 0.33 -0.31
95 AT3G16940 calmodulin binding;transcription regulators -0.75 0.32 -0.31
96 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.3 -0.33
97 AT1G28260 Telomerase activating protein Est1 -0.74 0.31 -0.33
98 AT5G01990 Auxin efflux carrier family protein -0.72 0.33 -0.31
99 AT2G18050 histone H1-3 histone H1-3 -0.72 0.31 -0.3
100 AT4G38350 Patched family protein -0.71 0.31 -0.31
101 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.33 -0.31
102 AT1G09910 Rhamnogalacturonate lyase family protein -0.71 0.32 -0.32
103 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.71 0.32 -0.31
104 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.7 0.32 -0.31
105 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.7 0.33 -0.33
106 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.69 0.31 -0.32
107 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.32 -0.3
108 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.68 0.3 -0.28
109 AT1G80440 Galactose oxidase/kelch repeat superfamily protein -0.68 0.29 -0.33
110 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.67 0.28 -0.32
111 AT1G48840 Plant protein of unknown function (DUF639) -0.66 0.31 -0.31
112 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 -0.65 0.3 -0.33
113 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.65 0.28 -0.32
114 AT3G20120 cytochrome P450, family 705, subfamily A, polypeptide 21 cytochrome P450, family 705,
subfamily A, polypeptide 21		 -0.65 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.84 0.44 -0.45 C0123
116 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.83 0.45 -0.47
117 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.76 0.31 -0.33 C0260
118 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.69 0.32 -0.3 C0137
119 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.69 0.33 -0.31 C0054
120 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.67 0.31 -0.31 C0257