AT1G54500 : -
Query Information
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AGICode AT1G54500
Description Rubredoxin-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54500 Rubredoxin-like superfamily protein 1 0.33 -0.3
2 AT4G10340 light harvesting complex of photosystem II 5 light harvesting complex of
photosystem II 5		 0.91 0.32 -0.29
3 AT1G31330 photosystem I subunit F photosystem I subunit F 0.89 0.34 -0.32
4 AT4G19100 Protein of unknown function (DUF3464) photosynthesis affected mutant 68 0.88 0.31 -0.31
5 AT3G21055 photosystem II subunit T photosystem II subunit T 0.87 0.32 -0.3
6 AT1G27480 alpha/beta-Hydrolases superfamily protein 0.87 0.3 -0.3
7 AT2G21210 SAUR-like auxin-responsive protein family 0.86 0.34 -0.32
8 AT2G28605 Photosystem II reaction center PsbP family protein 0.86 0.31 -0.31
9 AT1G20870 HSP20-like chaperones superfamily protein 0.86 0.31 -0.32
10 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.86 0.31 -0.3
11 AT1G22630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages; Has
87 Blast hits to 86 proteins in 34 species: Archae - 0;
Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.86 0.32 -0.32
12 AT1G54780 thylakoid lumen 18.3 kDa protein AtTLP18.3, thylakoid lumen protein
18.3		 0.85 0.32 -0.33
13 AT4G15110 cytochrome P450, family 97, subfamily B, polypeptide 3 cytochrome P450, family 97,
subfamily B, polypeptide 3		 0.85 0.31 -0.32
14 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.85 0.32 -0.33
15 AT4G35440 chloride channel E ATCLC-E, chloride channel E,
CHLORIDE CHANNEL E		 0.85 0.3 -0.32
16 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.85 0.31 -0.3
17 AT1G14700 purple acid phosphatase 3 ATPAP3, purple acid phosphatase 3 0.84 0.31 -0.28
18 AT2G38170 cation exchanger 1 ATCAX1, cation exchanger 1, RARE
COLD INDUCIBLE 4		 0.84 0.31 -0.31
19 ATCG00640 ribosomal protein L33 ribosomal protein L33 0.84 0.34 -0.32
20 AT5G48730 Pentatricopeptide repeat (PPR) superfamily protein 0.84 0.32 -0.31
21 AT4G28080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.84 0.31 -0.33
22 AT1G76520 Auxin efflux carrier family protein -0.83 0.3 -0.3
23 AT5G55470 Na+/H+ (sodium hydrogen) exchanger 3 ARABIDOPSIS THALIANA NA+/H+
(SODIUM HYDROGEN) EXCHANGER 3,
Na+/H+ (sodium hydrogen) exchanger
3		 0.83 0.3 -0.31
24 AT1G45230 Protein of unknown function (DUF3223) 0.83 0.31 -0.31
25 AT1G75460 ATP-dependent protease La (LON) domain protein 0.83 0.31 -0.32
26 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 0.83 0.31 -0.3
27 AT2G04790 unknown protein; Has 45 Blast hits to 45 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.83 0.32 -0.3
28 AT1G60600 UbiA prenyltransferase family protein ABERRANT CHLOROPLAST DEVELOPMENT 4 0.83 0.33 -0.32
29 AT5G20910 RING/U-box superfamily protein ABI3-interacting protein 2 -0.83 0.34 -0.31
30 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.3 -0.31
31 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 0.83 0.3 -0.29
32 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 -0.82 0.31 -0.32
33 AT3G53250 SAUR-like auxin-responsive protein family 0.82 0.3 -0.31
34 AT4G23270 cysteine-rich RLK (RECEPTOR-like protein kinase) 19 cysteine-rich RLK (RECEPTOR-like
protein kinase) 19		 -0.82 0.32 -0.31
35 AT3G50530 CDPK-related kinase CDPK-related kinase 0.82 0.32 -0.33
36 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.82 0.33 -0.31
37 AT2G28310 Protein of unknown function (DUF707) 0.81 0.32 -0.3
38 AT3G10160 DHFS-FPGS homolog C A. THALIANA DHFS-FPGS HOMOLOG C,
DHFS-FPGS homolog C,
folylpolyglutamate synthetase 2		 0.81 0.32 -0.32
39 AT5G14410 unknown protein; Has 23 Blast hits to 23 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.34 -0.34
40 AT3G29375 XH domain-containing protein 0.81 0.31 -0.32
41 AT2G36430 Plant protein of unknown function (DUF247) 0.81 0.33 -0.32
42 AT2G39510 nodulin MtN21 /EamA-like transporter family protein 0.81 0.31 -0.33
43 AT3G02070 Cysteine proteinases superfamily protein -0.81 0.31 -0.32
44 AT2G29310 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.34 -0.32
45 AT4G26060 Ribosomal protein L18ae family -0.81 0.31 -0.31
46 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 -0.81 0.34 -0.31
47 AT5G23920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.81 0.29 -0.31
48 AT4G28750 Photosystem I reaction centre subunit IV / PsaE protein PSA E1 KNOCKOUT 0.81 0.32 -0.32
49 AT4G02940 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.81 0.33 -0.3
50 AT1G31130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in
29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi -
0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.8 0.32 -0.32
51 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.8 0.31 -0.32
52 AT3G15180 ARM repeat superfamily protein -0.8 0.32 -0.3
53 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a -0.8 0.3 -0.33
54 AT3G46930 Protein kinase superfamily protein -0.8 0.32 -0.3
55 AT3G63310 Bax inhibitor-1 family protein BRZ-INSENSITIVE-LONG HYPOCOTYLS 4 -0.79 0.32 -0.33
56 AT1G25370 Protein of unknown function (DUF1639) -0.79 0.3 -0.32
57 AT3G12740 ALA-interacting subunit 1 ALA-interacting subunit 1 -0.79 0.32 -0.32
58 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 -0.79 0.32 -0.29
59 AT2G15760 Protein of unknown function (DUF1645) -0.79 0.29 -0.34
60 AT1G06010 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.79 0.29 -0.33
61 AT3G50260 cooperatively regulated by ethylene and jasmonate 1 ATERF#011, cooperatively regulated
by ethylene and jasmonate 1, DREB
AND EAR MOTIF PROTEIN 1		 -0.79 0.32 -0.32
62 AT5G40580 20S proteasome beta subunit PBB2 20S proteasome beta subunit PBB2 -0.79 0.31 -0.32
63 AT4G17615 calcineurin B-like protein 1 ARABIDOPSIS THALIANA CALCINEURIN
B-LIKE PROTEIN, calcineurin B-like
protein 1, SOS3-LIKE CALCIUM
BINDING PROTEIN 5		 -0.79 0.33 -0.33
64 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.79 0.33 -0.31
65 AT2G06255 ELF4-like 3 ELF4-like 3 -0.79 0.33 -0.31
66 AT2G44500 O-fucosyltransferase family protein -0.79 0.33 -0.33
67 AT5G38710 Methylenetetrahydrofolate reductase family protein -0.79 0.33 -0.31
68 AT2G06530 SNF7 family protein VPS2.1 -0.79 0.33 -0.29
69 AT1G25500 Plasma-membrane choline transporter family protein -0.79 0.34 -0.34
70 AT5G61010 exocyst subunit exo70 family protein E2 exocyst subunit exo70 family
protein E2, exocyst subunit exo70
family protein E2		 -0.78 0.3 -0.33
71 AT1G76640 Calcium-binding EF-hand family protein -0.78 0.31 -0.31
72 AT3G08690 ubiquitin-conjugating enzyme 11 ATUBC11, ubiquitin-conjugating
enzyme 11		 -0.78 0.3 -0.3
73 AT1G19020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits
to 88 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.32
74 AT5G01800 saposin B domain-containing protein -0.78 0.32 -0.29
75 AT4G28300 Protein of unknown function (DUF1421) -0.78 0.34 -0.31
76 AT1G74950 TIFY domain/Divergent CCT motif family protein JASMONATE-ZIM-DOMAIN PROTEIN 2,
TIFY10B		 -0.78 0.32 -0.31
77 AT3G62600 DNAJ heat shock family protein ATERDJ3B, ERDJ3B -0.78 0.32 -0.33
78 AT1G64610 Transducin/WD40 repeat-like superfamily protein -0.78 0.32 -0.33
79 AT3G53970 proteasome inhibitor-related -0.78 0.31 -0.33
80 AT1G78660 gamma-glutamyl hydrolase 1 gamma-glutamyl hydrolase 1,
gamma-glutamyl hydrolase 1		 -0.78 0.33 -0.3
81 AT3G13910 Protein of unknown function (DUF3511) -0.78 0.32 -0.33
82 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.78 0.33 -0.32
83 AT3G27880 Protein of unknown function (DUF1645) -0.78 0.33 -0.31
84 AT1G72470 exocyst subunit exo70 family protein D1 exocyst subunit exo70 family
protein D1, exocyst subunit exo70
family protein D1		 -0.78 0.31 -0.32
85 AT5G56750 N-MYC downregulated-like 1 N-MYC downregulated-like 1 -0.77 0.31 -0.32
86 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.77 0.31 -0.34
87 AT1G28190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits
to 162 proteins in 36 species: Archae - 0; Bacteria - 2;
Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other
Eukaryotes - 20 (source: NCBI BLink).		 -0.77 0.33 -0.3
88 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 -0.77 0.35 -0.31
89 AT5G35200 ENTH/ANTH/VHS superfamily protein -0.77 0.32 -0.31
90 AT5G55850 RPM1-interacting protein 4 (RIN4) family protein NOI -0.77 0.33 -0.32
91 AT2G39725 LYR family of Fe/S cluster biogenesis protein -0.77 0.3 -0.32
92 AT5G63880 SNF7 family protein VPS20.1 -0.77 0.31 -0.33
93 AT5G35735 Auxin-responsive family protein -0.77 0.33 -0.31
94 AT5G11230 Nucleotide-sugar transporter family protein -0.77 0.32 -0.32
95 AT2G37940 Arabidopsis Inositol phosphorylceramide synthase 2 Arabidopsis Inositol
phosphorylceramide synthase 2,
enhancing RPW8-mediated HR-like
cell death 1		 -0.77 0.29 -0.32
96 AT1G72900 Toll-Interleukin-Resistance (TIR) domain-containing protein -0.77 0.32 -0.32
97 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 -0.77 0.3 -0.31
98 AT2G36330 Uncharacterised protein family (UPF0497) -0.77 0.3 -0.3
99 AT4G25390 Protein kinase superfamily protein -0.77 0.31 -0.33
100 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1		 -0.77 0.32 -0.33
101 AT5G20230 blue-copper-binding protein blue-copper-binding protein, BLUE
COPPER BINDING PROTEIN,
blue-copper-binding protein,
SENESCENCE ASSOCIATED GENE 14		 -0.77 0.32 -0.31
102 AT4G24160 alpha/beta-Hydrolases superfamily protein -0.77 0.3 -0.32
103 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).		 -0.77 0.31 -0.31
104 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 -0.77 0.31 -0.3
105 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 -0.76 0.34 -0.31
106 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein -0.76 0.32 -0.32
107 AT2G34930 disease resistance family protein / LRR family protein -0.76 0.31 -0.31
108 AT3G51660 Tautomerase/MIF superfamily protein -0.76 0.31 -0.31
109 AT1G16470 proteasome subunit PAB1 proteasome subunit PAB1 -0.76 0.33 -0.28
110 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 -0.76 0.3 -0.34
111 AT4G18950 Integrin-linked protein kinase family -0.76 0.3 -0.32
112 AT1G15520 pleiotropic drug resistance 12 ATP-binding cassette G40,
Arabidopsis thaliana ATP-binding
cassette G40, PLEIOTROPIC DRUG
RESISTANCE 12, pleiotropic drug
resistance 12		 -0.76 0.34 -0.34
113 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 -0.76 0.31 -0.31
114 AT2G17790 VPS35 homolog A VPS35 homolog A, ZIG suppressor 3 -0.76 0.33 -0.32
115 AT1G35910 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
D		 -0.76 0.32 -0.3
116 AT1G79680 WALL ASSOCIATED KINASE (WAK)-LIKE 10 ATWAKL10, WALL ASSOCIATED KINASE
(WAK)-LIKE 10		 -0.76 0.32 -0.3
117 AT3G05290 peroxisomal adenine nucleotide carrier 1 AtPNC1, peroxisomal adenine
nucleotide carrier 1		 -0.76 0.3 -0.28
118 AT5G25930 Protein kinase family protein with leucine-rich repeat
domain		 -0.76 0.3 -0.3
119 AT2G02370 SNARE associated Golgi protein family -0.76 0.3 -0.29
120 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2		 -0.76 0.33 -0.31
121 AT5G54860 Major facilitator superfamily protein -0.76 0.33 -0.32
122 AT1G28050 B-box type zinc finger protein with CCT domain -0.76 0.32 -0.32
123 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 -0.75 0.34 -0.32
124 AT1G78420 RING/U-box superfamily protein -0.75 0.32 -0.31
125 AT5G18490 Plant protein of unknown function (DUF946) -0.75 0.3 -0.32
126 AT2G29440 glutathione S-transferase tau 6 glutathione S-transferase tau 6,
GLUTATHIONE S-TRANSFERASE 24,
glutathione S-transferase tau 6		 -0.75 0.33 -0.3
127 AT3G11330 plant intracellular ras group-related LRR 9 plant intracellular ras
group-related LRR 9		 -0.75 0.32 -0.32
128 AT1G71190 senescence associated gene 18 senescence associated gene 18 -0.75 0.3 -0.32
129 AT1G68140 Protein of unknown function (DUF1644) -0.75 0.3 -0.31
130 AT5G58290 regulatory particle triple-A ATPase 3 regulatory particle triple-A
ATPase 3		 -0.75 0.31 -0.31
131 AT3G22290 Endoplasmic reticulum vesicle transporter protein -0.75 0.32 -0.32
132 AT3G08990 Yippee family putative zinc-binding protein -0.75 0.33 -0.3
133 AT3G26020 Protein phosphatase 2A regulatory B subunit family protein -0.75 0.32 -0.33
134 AT1G33110 MATE efflux family protein -0.75 0.33 -0.31
135 AT1G03740 Protein kinase superfamily protein -0.75 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.8 0.45 -0.43 C0051