AT1G54320 : -
Query Information
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AGICode AT1G54320
Description LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 1 0.31 -0.33
2 AT1G05010 ethylene-forming enzyme ethylene forming enzyme, EAT1,
ethylene-forming enzyme		 0.73 0.31 -0.32
3 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.72 0.29 -0.31
4 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 -0.71 0.3 -0.32
5 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein -0.7 0.3 -0.31
6 AT2G30870 glutathione S-transferase PHI 10 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 10, ATGSTF4,
EARLY DEHYDRATION-INDUCED 13,
glutathione S-transferase PHI 10		 0.69 0.3 -0.32
7 AT3G08650 ZIP metal ion transporter family 0.69 0.34 -0.31
8 AT5G43320 casein kinase I-like 8 casein kinase I-like 8 0.69 0.34 -0.31
9 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.69 0.29 -0.3
10 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 0.69 0.32 -0.32
11 AT1G17160 pfkB-like carbohydrate kinase family protein 0.68 0.31 -0.33
12 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 0.68 0.31 -0.32
13 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 0.67 0.32 -0.31
14 AT4G01700 Chitinase family protein 0.67 0.3 -0.31
15 AT2G19930 RNA-dependent RNA polymerase family protein -0.67 0.33 -0.31
16 AT5G59210 myosin heavy chain-related 0.67 0.3 -0.31
17 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 0.67 0.32 -0.29
18 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 0.66 0.32 -0.33
19 AT1G03250 unknown protein; Has 89 Blast hits to 89 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.66 0.33 -0.29
20 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 0.65 0.3 -0.31
21 AT3G19770 Vacuolar sorting protein 9 (VPS9) domain ARABIDOPSIS THALIANA VACUOLAR
PROTEIN SORTING 9A, VPS9, VPS9A		 0.65 0.31 -0.32
22 AT1G16360 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 0.65 0.3 -0.32
23 AT3G19020 Leucine-rich repeat (LRR) family protein 0.64 0.3 -0.32
24 AT1G74210 PLC-like phosphodiesterases superfamily protein AtGDPD5, glycerophosphodiester
phosphodiesterase 5		 0.64 0.33 -0.32
25 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 -0.63 0.32 -0.3
26 AT1G07090 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 6 0.63 0.33 -0.34
27 AT4G29810 MAP kinase kinase 2 MAP kinase kinase 2, MAP KINASE
KINASE 1, MAP kinase kinase 2		 0.63 0.31 -0.31
28 AT4G17430 O-fucosyltransferase family protein 0.63 0.3 -0.32
29 AT4G28770 Tetraspanin family protein 0.62 0.31 -0.32
30 AT5G61760 inositol polyphosphate kinase 2 beta ARABIDOPSIS THALIANA INOSITOL
POLYPHOSPHATE KINASE 2 BETA,
INOSITOL POLYPHOSPHATE KINASE 2
BETA, inositol polyphosphate
kinase 2 beta		 0.62 0.3 -0.32
31 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.62 0.29 -0.31
32 AT5G25475 AP2/B3-like transcriptional factor family protein -0.62 0.33 -0.33
33 AT5G51740 Peptidase family M48 family protein 0.61 0.33 -0.3
34 AT2G44830 Protein kinase superfamily protein -0.61 0.31 -0.32
35 AT5G48170 F-box family protein SLEEPY2, SNEEZY -0.61 0.3 -0.32
36 AT1G74055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 6 growth stages; Has 24 Blast hits to 24 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.6 0.33 -0.31
37 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 0.6 0.32 -0.32
38 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.6 0.3 -0.3
39 AT5G20320 dicer-like 4 DICER-LIKE 4, dicer-like 4 -0.6 0.29 -0.33
40 AT3G57790 Pectin lyase-like superfamily protein 0.6 0.32 -0.31
41 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.33 -0.3
42 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.59 0.31 -0.32
43 AT3G48740 Nodulin MtN3 family protein AtSWEET11, SWEET11 0.59 0.33 -0.31
44 AT1G72410 COP1-interacting protein-related -0.58 0.3 -0.31
45 AT3G07690 6-phosphogluconate dehydrogenase family protein 0.58 0.32 -0.3
46 AT1G01340 cyclic nucleotide gated channel 10 ACBK1, cyclic nucleotide gated
channel 10, cyclic nucleotide
gated channel 10		 0.58 0.33 -0.33
47 AT1G50380 Prolyl oligopeptidase family protein -0.57 0.32 -0.3
48 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.33
49 AT5G63910 farnesylcysteine lyase farnesylcysteine lyase 0.56 0.3 -0.31
50 AT1G79940 DnaJ / Sec63 Brl domains-containing protein ATERDJ2A 0.56 0.32 -0.31
51 AT4G11970 YTH family protein -0.56 0.32 -0.33
52 AT4G31980 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF247, plant (InterPro:IPR004158),
Protein of unknown function DUF862, eukaryotic
(InterPro:IPR008580); BEST Arabidopsis thaliana protein
match is: Plant protein of unknown function (DUF247)
(TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in
183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi
- 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178
(source: NCBI BLink).		 0.56 0.31 -0.31
53 AT3G07990 serine carboxypeptidase-like 27 serine carboxypeptidase-like 27 0.56 0.32 -0.34
54 AT1G72090 Methylthiotransferase -0.55 0.32 -0.31
55 AT2G35670 VEFS-Box of polycomb protein FERTILIZATION-INDEPENDENT
ENDOSPERM 2, FERTILIZATION
INDEPENDENT SEED 2		 -0.55 0.32 -0.33
56 AT4G31430 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.55 0.3 -0.32
57 AT4G19350 embryo defective 3006 embryo defective 3006 -0.55 0.31 -0.32
58 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2		 -0.54 0.31 -0.31
59 AT1G31360 RECQ helicase L2 ARABIDOPSIS THALIANA RECQ 2,
MED34, RECQ helicase L2		 -0.54 0.33 -0.33
60 AT3G52490 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.54 0.32 -0.32
61 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 -0.53 0.33 -0.32
62 AT3G29800 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.32 -0.31
63 AT5G02010 RHO guanyl-nucleotide exchange factor 7 ATROPGEF7, RHO guanyl-nucleotide
exchange factor 7		 -0.52 0.32 -0.32
64 AT1G58340 MATE efflux family protein BUSH-AND-CHLOROTIC-DWARF 1, ZF14,
ZRIZI		 -0.52 0.3 -0.29
65 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 -0.51 0.34 -0.32
66 AT1G61240 Protein of unknown function (DUF707) -0.51 0.32 -0.31
67 AT5G39220 alpha/beta-Hydrolases superfamily protein -0.5 0.33 -0.31
68 AT3G58330 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.5 0.31 -0.31
69 AT5G47470 Nodulin MtN21 /EamA-like transporter family protein -0.5 0.32 -0.31