AT1G54380 : -
Query Information
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AGICode AT1G54380
Description spliceosome protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54380 spliceosome protein-related 1 0.32 -0.32
2 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.86 0.33 -0.31
3 AT3G21540 transducin family protein / WD-40 repeat family protein 0.86 0.31 -0.33
4 AT1G79150 binding 0.84 0.31 -0.33
5 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 0.84 0.3 -0.3
6 AT3G55510 Noc2p family REBELOTE 0.84 0.32 -0.32
7 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.83 0.34 -0.31
8 AT5G11240 transducin family protein / WD-40 repeat family protein 0.83 0.33 -0.33
9 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.83 0.32 -0.32
10 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.82 0.31 -0.32
11 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.82 0.32 -0.3
12 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 0.81 0.32 -0.3
13 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.31 -0.31
14 AT1G13160 ARM repeat superfamily protein 0.81 0.3 -0.32
15 AT4G25730 FtsJ-like methyltransferase family protein 0.81 0.31 -0.31
16 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.31 -0.32
17 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 0.81 0.3 -0.32
18 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.8 0.32 -0.33
19 AT1G79150 binding 0.8 0.31 -0.31
20 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.8 0.32 -0.3
21 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.79 0.32 -0.33
22 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.79 0.29 -0.31
23 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.31 -0.32
24 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.78 0.31 -0.3
25 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.78 0.35 -0.31
26 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.78 0.33 -0.32
27 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 0.78 0.31 -0.31
28 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.78 0.33 -0.3
29 AT5G59980 Polymerase/histidinol phosphatase-like 0.78 0.32 -0.3
30 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.31 -0.31
31 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.78 0.32 -0.3
32 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.78 0.31 -0.34
33 AT1G30960 GTP-binding family protein 0.78 0.32 -0.31
34 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.78 0.29 -0.34
35 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.77 0.3 -0.33
36 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.77 0.31 -0.32
37 AT3G15460 Ribosomal RNA processing Brix domain protein 0.77 0.29 -0.3
38 AT2G25970 KH domain-containing protein 0.77 0.32 -0.31
39 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.77 0.33 -0.31
40 AT1G13030 sphere organelles protein-related 0.77 0.3 -0.31
41 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.77 0.3 -0.3
42 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.77 0.3 -0.32
43 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.77 0.29 -0.31
44 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.76 0.31 -0.32
45 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c 0.76 0.33 -0.31
46 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.76 0.3 -0.31
47 AT4G38710 glycine-rich protein 0.76 0.31 -0.32
48 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.76 0.33 -0.31
49 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.76 0.33 -0.3
50 AT3G11964 RNA binding;RNA binding 0.76 0.33 -0.32
51 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 0.75 0.29 -0.29
52 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.3 -0.32
53 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.33 -0.31
54 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.74 0.33 -0.31
55 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.32 -0.32
56 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.3 -0.3
57 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.74 0.33 -0.31
58 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 0.74 0.33 -0.31
59 AT2G02880 mucin-related 0.73 0.32 -0.3
60 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.73 0.33 -0.32
61 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.73 0.31 -0.3
62 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.34 -0.31
63 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.68 0.31 -0.32
64 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.66 0.31 -0.31
65 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.33 -0.3
66 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 -0.65 0.34 -0.31
67 AT5G13760 Plasma-membrane choline transporter family protein -0.65 0.31 -0.3
68 AT2G23780 RING/U-box superfamily protein -0.65 0.33 -0.32
69 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.64 0.3 -0.29
70 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 -0.63 0.29 -0.32
71 AT1G79420 Protein of unknown function (DUF620) -0.63 0.33 -0.3
72 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.63 0.36 -0.31
73 AT1G70290 trehalose-6-phosphatase synthase S8 ATTPS8, ATTPSC,
trehalose-6-phosphatase synthase
S8		 -0.63 0.29 -0.33
74 AT2G25350 Phox (PX) domain-containing protein -0.62 0.32 -0.3
75 AT3G23200 Uncharacterised protein family (UPF0497) -0.62 0.28 -0.31
76 AT1G59520 CW7 CW7 -0.61 0.33 -0.3
77 AT4G20820 FAD-binding Berberine family protein -0.61 0.32 -0.32
78 AT1G60260 beta glucosidase 5 beta glucosidase 5 -0.61 0.34 -0.31
79 AT3G44280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.3 -0.34
80 AT3G18295 Protein of unknown function (DUF1639) -0.6 0.31 -0.31
81 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.6 0.33 -0.33
82 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E -0.59 0.3 -0.29
83 AT3G02700 NC domain-containing protein-related -0.58 0.32 -0.32
84 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.32 -0.31
85 AT2G30540 Thioredoxin superfamily protein -0.58 0.32 -0.3