AGICode | AT1G75600 |
Description | Histone superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G75600 | Histone superfamily protein | 1 | 0.3 | -0.31 | |||
2 | AT3G51120 | DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding |
-0.67 | 0.31 | -0.32 | |||
3 | AT1G06440 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.66 | 0.3 | -0.32 | |||
4 | AT4G19580 | DNAJ heat shock N-terminal domain-containing protein | -0.65 | 0.32 | -0.32 | |||
5 | AT5G17020 | exportin 1A | ATCRM1, ARABIDOPSIS THALIANA EXPORTIN 1, HEAT-INTOLERANT 2, EXPORTIN 1, exportin 1A |
-0.64 | 0.31 | -0.32 | ||
6 | AT1G54420 | unknown protein; Has 9 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.63 | 0.29 | -0.32 | |||
7 | AT5G46660 | protein kinase C-like zinc finger protein | -0.63 | 0.33 | -0.31 | |||
8 | AT2G27460 | sec23/sec24 transport family protein | -0.63 | 0.35 | -0.3 | |||
9 | AT3G15430 | Regulator of chromosome condensation (RCC1) family protein | -0.61 | 0.32 | -0.31 | |||
10 | AT1G33760 | Integrase-type DNA-binding superfamily protein | 0.61 | 0.3 | -0.33 | |||
11 | AT5G58450 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.3 | -0.29 | |||
12 | AT5G23110 | Zinc finger, C3HC4 type (RING finger) family protein | -0.6 | 0.3 | -0.31 | |||
13 | AT3G52640 | Zn-dependent exopeptidases superfamily protein | -0.6 | 0.33 | -0.33 | |||
14 | AT5G38840 | SMAD/FHA domain-containing protein | -0.6 | 0.32 | -0.31 | |||
15 | AT1G03890 | RmlC-like cupins superfamily protein | -0.6 | 0.31 | -0.31 | |||
16 | AT2G35100 | Exostosin family protein | ARABINAN DEFICIENT 1 | -0.59 | 0.3 | -0.3 | ||
17 | AT2G07360 | SH3 domain-containing protein | -0.59 | 0.32 | -0.31 | |||
18 | AT4G37770 | 1-amino-cyclopropane-1-carboxylate synthase 8 | 1-amino-cyclopropane-1-carboxylate synthase 8 |
0.59 | 0.31 | -0.31 | ||
19 | AT2G03630 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
0.59 | 0.31 | -0.33 | |||
20 | AT4G29450 | Leucine-rich repeat protein kinase family protein | -0.59 | 0.32 | -0.32 | |||
21 | AT5G15800 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 2, SEPALLATA1 | -0.58 | 0.31 | -0.32 | ||
22 | AT1G05550 | Protein of unknown function (DUF295) | -0.57 | 0.31 | -0.31 | |||
23 | AT5G66030 | Golgi-localized GRIP domain-containing protein | ATGRIP, GRIP | -0.57 | 0.32 | -0.33 | ||
24 | AT3G25750 | F-box family protein with a domain of unknown function (DUF295) |
-0.57 | 0.31 | -0.32 | |||
25 | AT2G47120 | NAD(P)-binding Rossmann-fold superfamily protein | 0.57 | 0.31 | -0.32 | |||
26 | AT2G45540 | WD-40 repeat family protein / beige-related | -0.56 | 0.28 | -0.33 | |||
27 | AT1G67880 | beta-1,4-N-acetylglucosaminyltransferase family protein | 0.56 | 0.32 | -0.32 | |||
28 | AT3G50590 | Transducin/WD40 repeat-like superfamily protein | -0.56 | 0.33 | -0.33 | |||
29 | AT3G05080 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
30 | AT3G42350 | transposable element gene | -0.56 | 0.28 | -0.32 | |||
31 | AT5G01280 | BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
32 | AT1G49930 | BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.33 | -0.29 | |||
33 | AT5G53480 | ARM repeat superfamily protein | -0.56 | 0.3 | -0.32 | |||
34 | AT5G43230 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.32 | -0.29 | |||
35 | AT2G16630 | Pollen Ole e 1 allergen and extensin family protein | 0.56 | 0.31 | -0.32 | |||
36 | AT4G32410 | cellulose synthase 1 | CELLULOSE SYNTHASE 1, cellulose synthase 1, RADIALLY SWOLLEN 1 |
-0.55 | 0.32 | -0.31 | ||
37 | AT1G09730 | Cysteine proteinases superfamily protein | -0.55 | 0.31 | -0.31 | |||
38 | AT5G28090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.55 | 0.32 | -0.3 | |||
39 | AT2G19880 | Nucleotide-diphospho-sugar transferases superfamily protein | -0.55 | 0.29 | -0.3 | |||
40 | AT3G30220 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits to 30 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.32 | |||
41 | AT4G20090 | Pentatricopeptide repeat (PPR) superfamily protein | embryo defective 1025 | -0.55 | 0.32 | -0.32 | ||
42 | AT4G33530 | K+ uptake permease 5 | K+ uptake permease 5 | -0.55 | 0.34 | -0.33 | ||
43 | AT4G36620 | GATA transcription factor 19 | GATA transcription factor 19, hanaba taranu like 2 |
-0.55 | 0.32 | -0.32 | ||
44 | AT4G28280 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 |
0.55 | 0.31 | -0.32 | ||
45 | AT5G11040 | TRS120 | AtTRS120, TRS120 | -0.55 | 0.34 | -0.33 | ||
46 | AT5G01860 | C2H2 and C2HC zinc fingers superfamily protein | -0.55 | 0.31 | -0.32 | |||
47 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
0.55 | 0.31 | -0.33 | ||
48 | AT1G15890 | Disease resistance protein (CC-NBS-LRR class) family | 0.55 | 0.32 | -0.31 | |||
49 | AT2G15930 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.34 | -0.33 | |||
50 | AT4G36430 | Peroxidase superfamily protein | 0.55 | 0.32 | -0.33 | |||
51 | AT2G33540 | C-terminal domain phosphatase-like 3 | ATCPL3, C-terminal domain phosphatase-like 3 |
-0.55 | 0.31 | -0.33 | ||
52 | AT5G18880 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
0.55 | 0.29 | -0.3 | |||
53 | AT5G41400 | RING/U-box superfamily protein | 0.55 | 0.31 | -0.28 | |||
54 | AT5G59860 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.55 | 0.3 | -0.32 | |||
55 | AT3G23870 | Protein of unknown function (DUF803) | -0.54 | 0.32 | -0.33 | |||
56 | AT5G61620 | myb-like transcription factor family protein | -0.54 | 0.31 | -0.31 | |||
57 | AT4G03330 | syntaxin of plants 123 | ATSYP123, syntaxin of plants 123 | -0.54 | 0.3 | -0.32 | ||
58 | AT1G79350 | RING/FYVE/PHD zinc finger superfamily protein | embryo defective 1135 | -0.54 | 0.31 | -0.32 | ||
59 | AT1G08860 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 3 | -0.54 | 0.34 | -0.32 | ||
60 | AT2G06950 | transposable element gene | -0.54 | 0.32 | -0.3 | |||
61 | AT1G01780 | GATA type zinc finger transcription factor family protein | PLIM2b | -0.54 | 0.29 | -0.31 | ||
62 | AT5G47970 | Aldolase-type TIM barrel family protein | -0.54 | 0.31 | -0.32 | |||
63 | AT4G36870 | BEL1-like homeodomain 2 | BEL1-like homeodomain 2, SAWTOOTH 1 |
-0.54 | 0.34 | -0.34 | ||
64 | AT5G24710 | Transducin/WD40 repeat-like superfamily protein | -0.54 | 0.36 | -0.31 | |||
65 | AT1G54840 | HSP20-like chaperones superfamily protein | 0.53 | 0.31 | -0.32 | |||
66 | AT1G16460 | rhodanese homologue 2 | ARABIDOPSIS THALIANA MERCAPTOPYRUVATE SULFURTRANSFERASE 2, rhodanese homologue 2, MERCAPTOPYRUVATE SULFURTRANSFERASE 2, rhodanese homologue 2, SULFURTRANSFERASE 2, SULFURTRANSFERASE 2 |
0.53 | 0.33 | -0.31 | ||
67 | AT1G71820 | SEC6 | SEC6 | -0.53 | 0.32 | -0.34 | ||
68 | AT3G26614 | transposable element gene | -0.53 | 0.31 | -0.33 | |||
69 | AT2G41020 | WW domain-containing protein | -0.53 | 0.32 | -0.31 | |||
70 | AT3G03510 | Phototropic-responsive NPH3 family protein | -0.53 | 0.3 | -0.32 | |||
71 | AT3G01130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.3 | -0.33 | |||
72 | AT1G18950 | DDT domain superfamily | -0.53 | 0.31 | -0.33 | |||
73 | AT1G05800 | alpha/beta-Hydrolases superfamily protein | DONGLE | -0.53 | 0.31 | -0.31 | ||
74 | AT4G07425 | transposable element gene | -0.53 | 0.3 | -0.31 | |||
75 | AT2G15670 | BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT3G51670.1); Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.29 | -0.31 | |||
76 | AT4G24980 | nodulin MtN21 /EamA-like transporter family protein | -0.52 | 0.33 | -0.3 | |||
77 | AT2G44000 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
0.52 | 0.31 | -0.31 | |||
78 | AT5G27150 | Na+/H+ exchanger 1 | AT-NHX1, ATNHX, ATNHX1, Na+/H+ exchanger 1 |
-0.52 | 0.3 | -0.3 | ||
79 | AT4G14940 | amine oxidase 1 | amine oxidase 1, amine oxidase 1 | -0.52 | 0.32 | -0.32 | ||
80 | AT1G73310 | serine carboxypeptidase-like 4 | serine carboxypeptidase-like 4 | -0.52 | 0.3 | -0.31 | ||
81 | AT5G62830 | F-box associated ubiquitination effector family protein | -0.52 | 0.32 | -0.32 | |||
82 | AT2G13330 | transposable element gene | -0.52 | 0.32 | -0.35 | |||
83 | AT3G10100 | transposable element gene | 0.52 | 0.33 | -0.3 | |||
84 | AT5G48990 | Galactose oxidase/kelch repeat superfamily protein | -0.52 | 0.32 | -0.3 | |||
85 | AT1G08100 | nitrate transporter 2.2 | ACH2, NITRATE TRANSPORTER 2.2, nitrate transporter 2.2, NRT2;2AT |
-0.51 | 0.33 | -0.32 | ||
86 | AT4G38880 | GLN phosphoribosyl pyrophosphate amidotransferase 3 | GLN phosphoribosyl pyrophosphate amidotransferase 3, GLN phosphoribosyl pyrophosphate amidotransferase 3 |
-0.51 | 0.29 | -0.32 | ||
87 | AT1G21220 | transposable element gene | 0.51 | 0.31 | -0.32 | |||
88 | AT3G44690 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.51 | 0.31 | -0.32 | |||
89 | AT5G61350 | Protein kinase superfamily protein | -0.51 | 0.32 | -0.32 | |||
90 | AT3G61040 | cytochrome P450, family 76, subfamily C, polypeptide 7 | cytochrome P450, family 76, subfamily C, polypeptide 7 |
-0.51 | 0.34 | -0.31 | ||
91 | AT5G25060 | RNA recognition motif (RRM)-containing protein | -0.51 | 0.34 | -0.31 | |||
92 | AT3G24360 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.5 | 0.32 | -0.31 | |||
93 | AT5G48710 | Ubiquitin-like superfamily protein | 0.5 | 0.33 | -0.32 | |||
94 | AT3G42340 | transposable element gene | 0.5 | 0.3 | -0.29 | |||
95 | AT1G35740 | pseudogene, similar to putative beta-1,3-glucan synthase, blastp match of 57% identity and 2.1e-14 P-value to GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative beta-1,3-glucan synthase {Nicotiana alata} |
0.5 | 0.3 | -0.33 | |||
96 | AT3G04800 | translocase inner membrane subunit 23-3 | translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3 |
0.49 | 0.32 | -0.31 | ||
97 | AT3G20690 | F-box and associated interaction domains-containing protein | 0.49 | 0.32 | -0.3 | |||
98 | AT1G65630 | DegP protease 3 | DegP protease 3 | 0.48 | 0.32 | -0.32 | ||
99 | AT2G10380 | transposable element gene | 0.48 | 0.3 | -0.32 | |||
100 | AT5G19720 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain |
0.48 | 0.3 | -0.31 | |||
101 | AT5G36960 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.48 | 0.31 | -0.3 | |||
102 | AT4G13985 | FBD-associated F-box protein | FBD-associated F-box protein | 0.48 | 0.31 | -0.31 | ||
103 | AT2G18470 | roline-rich extensin-like receptor kinase 4 | proline-rich extensin-like receptor kinase 4, proline-rich extensin-like receptor kinase 4 |
0.48 | 0.31 | -0.31 | ||
104 | AT4G29600 | Cytidine/deoxycytidylate deaminase family protein | 0.48 | 0.32 | -0.3 | |||
105 | AT5G09340 | Ubiquitin family protein | 0.47 | 0.31 | -0.29 | |||
106 | AT1G64620 | Dof-type zinc finger DNA-binding family protein | 0.46 | 0.33 | -0.31 | |||
107 | AT2G25565 | BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 27 Blast hits to 27 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.3 | -0.3 | |||
108 | AT3G28520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.46 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0231 | Serine | D,L-Serine | D-Serine; L-Serine | sphingolipid biosynthesis (plants), folate polyglutamylation, tryptophan biosynthesis, phospholipid biosynthesis II, homocysteine and cysteine interconversion, photorespiration, seleno-amino acid biosynthesis, glycine biosynthesis, tRNA charging, serine racemization, phosphatidylethanolamine biosynthesis I, serine biosynthesis, choline biosynthesis I, cysteine biosynthesis I, folate transformations II |
0.52 | 0.34 | -0.31 |