AT1G54210 : AUTOPHAGY 12
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G54210
Description Ubiquitin-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 1 0.31 -0.32
2 AT2G20740 Tetraspanin family protein 0.86 0.33 -0.31
3 AT2G19350 Eukaryotic protein of unknown function (DUF872) 0.83 0.32 -0.3
4 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.83 0.31 -0.32
5 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.82 0.32 -0.32
6 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.82 0.32 -0.31
7 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.82 0.33 -0.31
8 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 0.81 0.32 -0.34
9 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.31 -0.31
10 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 0.8 0.3 -0.32
11 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.8 0.35 -0.33
12 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 0.79 0.3 -0.32
13 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 0.79 0.31 -0.3
14 AT1G36980 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0220
(InterPro:IPR007919); Has 424 Blast hits to 424 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi
- 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.79 0.32 -0.32
15 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 -0.77 0.32 -0.32
16 AT3G53940 Mitochondrial substrate carrier family protein -0.77 0.32 -0.33
17 AT5G27280 Zim17-type zinc finger protein 0.77 0.3 -0.32
18 AT5G65860 ankyrin repeat family protein -0.77 0.33 -0.29
19 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.76 0.32 -0.29
20 AT4G10330 glycine-rich protein 0.76 0.31 -0.31
21 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.76 0.31 -0.33
22 AT2G31800 Integrin-linked protein kinase family 0.76 0.33 -0.31
23 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.76 0.32 -0.3
24 AT5G59680 Leucine-rich repeat protein kinase family protein -0.75 0.33 -0.32
25 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.75 0.31 -0.3
26 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 -0.74 0.32 -0.3
27 AT1G06130 glyoxalase 2-4 glyoxalase 2-4 0.74 0.31 -0.31
28 AT4G33940 RING/U-box superfamily protein 0.74 0.32 -0.33
29 AT1G66900 alpha/beta-Hydrolases superfamily protein 0.74 0.31 -0.31
30 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 0.74 0.29 -0.32
31 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.74 0.31 -0.32
32 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.73 0.32 -0.34
33 AT3G11100 sequence-specific DNA binding transcription factors 0.73 0.3 -0.3
34 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.34 -0.31
35 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 -0.73 0.31 -0.32
36 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 0.73 0.33 -0.33
37 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 0.73 0.33 -0.33
38 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.73 0.3 -0.33
39 AT4G18530 Protein of unknown function (DUF707) 0.73 0.33 -0.32
40 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 -0.72 0.3 -0.31
41 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.32 -0.31
42 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life 0.72 0.33 -0.31
43 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 -0.72 0.3 -0.3
44 AT3G03330 NAD(P)-binding Rossmann-fold superfamily protein 0.72 0.32 -0.3
45 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.72 0.31 -0.32
46 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.32
47 AT5G11490 adaptin family protein -0.72 0.32 -0.32
48 AT3G24280 small acidic protein 2 small acidic protein 2 -0.72 0.31 -0.32
49 AT1G19230 Riboflavin synthase-like superfamily protein 0.72 0.33 -0.31
50 AT5G58150 Leucine-rich repeat protein kinase family protein -0.72 0.32 -0.33
51 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.72 0.31 -0.3
52 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.71 0.3 -0.3
53 AT2G26210 Ankyrin repeat family protein 0.71 0.29 -0.32
54 AT5G67100 DNA-directed DNA polymerases INCURVATA2 -0.71 0.32 -0.35
55 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.71 0.33 -0.32
56 AT5G38895 RING/U-box superfamily protein 0.71 0.31 -0.31
57 AT3G18560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits
to 95 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.31
58 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.32 -0.31
59 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT 0.7 0.32 -0.31
60 AT3G60590 unknown protein; LOCATED IN: chloroplast, chloroplast inner
membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19
species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.7 0.32 -0.29
61 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.7 0.32 -0.33
62 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.7 0.31 -0.31
63 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.32 -0.31
64 AT1G15880 golgi snare 11 atgos11, golgi snare 11 0.7 0.32 -0.32
65 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.7 0.32 -0.31
66 AT5G43610 sucrose-proton symporter 6 sucrose-proton symporter 6,
sucrose-proton symporter 6		 -0.7 0.32 -0.32
67 AT1G11280 S-locus lectin protein kinase family protein -0.7 0.32 -0.33
68 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 -0.7 0.33 -0.32
69 AT1G26800 RING/U-box superfamily protein 0.7 0.33 -0.3
70 AT2G15830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G33960.1); Has 18 Blast hits to 18 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.32
71 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.7 0.32 -0.31
72 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.7 0.36 -0.29
73 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.7 0.31 -0.32
74 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.7 0.34 -0.33
75 AT1G32950 Subtilase family protein 0.7 0.32 -0.31
76 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.29 -0.32
77 AT1G14200 RING/U-box superfamily protein 0.7 0.3 -0.33
78 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 -0.69 0.31 -0.33
79 AT5G05230 RING/U-box superfamily protein 0.69 0.33 -0.32
80 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases -0.69 0.33 -0.32
81 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.32 -0.32
82 AT3G13662 Disease resistance-responsive (dirigent-like protein)
family protein		 0.69 0.33 -0.32
83 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 0.69 0.31 -0.32
84 AT1G26300 BSD domain-containing protein 0.69 0.28 -0.34
85 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 -0.69 0.3 -0.3
86 AT2G03360 Glycosyltransferase family 61 protein 0.69 0.32 -0.32
87 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.69 0.31 -0.29
88 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 0.69 0.32 -0.34
89 AT3G13820 F-box and associated interaction domains-containing protein -0.69 0.32 -0.32
90 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE -0.69 0.31 -0.31
91 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 0.69 0.31 -0.31
92 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 -0.69 0.31 -0.32
93 AT1G50180 NB-ARC domain-containing disease resistance protein -0.68 0.3 -0.3
94 AT2G27260 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.68 0.3 -0.32
95 AT3G52240 unknown protein; Has 220 Blast hits to 193 proteins in 66
species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi -
33; Plants - 66; Viruses - 0; Other Eukaryotes - 53
(source: NCBI BLink).		 0.68 0.32 -0.33
96 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.33
97 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.33 -0.3
98 AT4G13160 Protein of unknown function, DUF593 0.68 0.31 -0.31
99 AT2G40660 Nucleic acid-binding, OB-fold-like protein -0.68 0.32 -0.31
100 AT3G13430 RING/U-box superfamily protein 0.68 0.32 -0.3
101 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 0.68 0.31 -0.3
102 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.68 0.32 -0.32
103 AT5G03080 Phosphatidic acid phosphatase (PAP2) family protein 0.68 0.31 -0.32
104 AT2G20960 Arabidopsis phospholipase-like protein (PEARLI 4) family pEARLI4 0.68 0.32 -0.31
105 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 0.68 0.31 -0.31
106 AT2G35040 AICARFT/IMPCHase bienzyme family protein -0.68 0.33 -0.31
107 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.68 0.3 -0.29
108 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.33
109 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 -0.67 0.34 -0.3
110 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.3
111 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.67 0.32 -0.31
112 AT4G05610 transposable element gene -0.67 0.31 -0.32
113 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.67 0.31 -0.3
114 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein -0.67 0.3 -0.33
115 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.67 0.31 -0.33
116 AT4G30840 Transducin/WD40 repeat-like superfamily protein -0.67 0.32 -0.31
117 AT2G10010 transposable element gene -0.66 0.3 -0.31
118 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 -0.66 0.31 -0.32
119 AT1G43140 Cullin family protein -0.66 0.32 -0.34
120 AT5G34800 transposable element gene -0.66 0.34 -0.32
121 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 -0.66 0.32 -0.31
122 AT1G79220 Mitochondrial transcription termination factor family
protein		 -0.66 0.33 -0.29
123 AT1G69330 RING/U-box superfamily protein -0.66 0.32 -0.3
124 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.66 0.32 -0.32
125 AT1G30350 Pectin lyase-like superfamily protein -0.66 0.32 -0.3
126 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.66 0.32 -0.31
127 AT1G64410 transposable element gene -0.65 0.32 -0.3
128 AT1G14850 nucleoporin 155 nucleoporin 155 -0.65 0.31 -0.31
129 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.31
130 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.35
131 AT3G27170 chloride channel B ATCLC-B, chloride channel B -0.65 0.32 -0.33
132 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.32 -0.32
133 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 -0.65 0.3 -0.32
134 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 -0.65 0.32 -0.29
135 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.33 -0.35
136 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.31
137 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.34 -0.33
138 AT5G38460 ALG6, ALG8 glycosyltransferase family -0.65 0.34 -0.3
139 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.3
140 AT2G45080 cyclin p3;1 cyclin p3;1 -0.65 0.32 -0.33
141 AT5G11290 Plant protein of unknown function (DUF247) -0.65 0.32 -0.29
142 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.65 0.32 -0.32
143 AT3G52460 hydroxyproline-rich glycoprotein family protein -0.65 0.33 -0.32