AT1G54420 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G54420
Description unknown protein; Has 9 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 1 0.32 -0.31
2 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.71 0.33 -0.3
3 AT4G29090 Ribonuclease H-like superfamily protein -0.7 0.29 -0.31
4 AT1G50350 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.33
5 AT1G15190 Fasciclin-like arabinogalactan family protein 0.69 0.32 -0.31
6 AT3G60410 Protein of unknown function (DUF1639) 0.67 0.3 -0.32
7 AT5G46660 protein kinase C-like zinc finger protein -0.67 0.3 -0.33
8 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.3 -0.31
9 AT1G18830 Transducin/WD40 repeat-like superfamily protein -0.66 0.32 -0.31
10 AT4G09290 transposable element gene -0.66 0.34 -0.35
11 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.29 -0.33
12 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 -0.64 0.32 -0.32
13 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 0.64 0.31 -0.32
14 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.63 0.32 -0.32
15 AT4G21323 Subtilase family protein -0.63 0.31 -0.33
16 AT5G40680 Galactose oxidase/kelch repeat superfamily protein -0.63 0.31 -0.31
17 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 -0.63 0.31 -0.3
18 AT1G75600 Histone superfamily protein 0.63 0.31 -0.31
19 AT5G51320 transposable element gene 0.62 0.31 -0.31
20 AT1G64320 myosin heavy chain-related -0.62 0.31 -0.31
21 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein -0.62 0.33 -0.3
22 AT3G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G05180.1); Has 15699 Blast
hits to 11378 proteins in 1134 species: Archae - 391;
Bacteria - 2054; Metazoa - 6851; Fungi - 1354; Plants -
1096; Viruses - 119; Other Eukaryotes - 3834 (source: NCBI
BLink).		 0.62 0.29 -0.3
23 AT5G34895 transposable element gene 0.61 0.32 -0.31
24 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 -0.61 0.33 -0.31
25 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.61 0.33 -0.31
26 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 -0.61 0.31 -0.31
27 AT2G35100 Exostosin family protein ARABINAN DEFICIENT 1 -0.6 0.33 -0.33
28 AT4G03670 transposable element gene 0.6 0.31 -0.29
29 AT5G14770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.33 -0.33
30 AT5G57200 ENTH/ANTH/VHS superfamily protein -0.6 0.32 -0.34
31 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.33
32 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 -0.6 0.31 -0.3
33 AT1G07160 Protein phosphatase 2C family protein -0.6 0.32 -0.29
34 AT5G59860 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.32 -0.3
35 AT4G38200 SEC7-like guanine nucleotide exchange family protein -0.59 0.3 -0.32
36 AT3G15430 Regulator of chromosome condensation (RCC1) family protein -0.59 0.31 -0.3
37 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 -0.59 0.32 -0.31
38 AT4G29990 Leucine-rich repeat transmembrane protein kinase protein 0.59 0.3 -0.34
39 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 0.59 0.31 -0.33
40 AT4G03750 transposable element gene -0.59 0.32 -0.32
41 AT2G16840 transposable element gene 0.58 0.31 -0.32
42 AT3G48960 Ribosomal protein L13e family protein -0.58 0.32 -0.3
43 AT1G57650 ATP binding -0.58 0.29 -0.33
44 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 -0.58 0.3 -0.34
45 AT2G07360 SH3 domain-containing protein -0.58 0.31 -0.3
46 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein -0.58 0.31 -0.32
47 AT5G49120 Protein of unknown function (DUF581) 0.58 0.3 -0.32
48 AT3G30150 transposable element gene 0.58 0.31 -0.32
49 AT1G06320 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.57 0.33 -0.32
50 AT1G15870 Mitochondrial glycoprotein family protein -0.57 0.31 -0.31
51 AT5G59660 Leucine-rich repeat protein kinase family protein 0.57 0.33 -0.28
52 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.57 0.31 -0.3
53 AT4G20400 JUMONJI 14 JUMONJI 14, PKDM7B -0.57 0.29 -0.32
54 AT2G11150 transposable element gene -0.57 0.31 -0.3
55 AT4G36870 BEL1-like homeodomain 2 BEL1-like homeodomain 2, SAWTOOTH
1		 -0.57 0.32 -0.3
56 AT5G01290 mRNA capping enzyme family protein -0.57 0.31 -0.3
57 AT3G45480 RING/U-box protein with C6HC-type zinc finger 0.56 0.31 -0.31
58 AT2G45460 SMAD/FHA domain-containing protein -0.56 0.32 -0.31
59 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.56 0.31 -0.3
60 AT3G05790 lon protease 4 lon protease 4 -0.56 0.34 -0.31
61 AT5G11040 TRS120 AtTRS120, TRS120 -0.56 0.32 -0.31
62 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.56 0.32 -0.32
63 AT2G07380 transposable element gene -0.56 0.33 -0.3
64 AT1G06530 Tropomyosin-related peroxisomal and mitochondrial
division factor 2		 -0.55 0.33 -0.33
65 AT4G13230 Late embryogenesis abundant protein (LEA) family protein 0.55 0.32 -0.31
66 AT2G05020 transposable element gene -0.55 0.3 -0.31
67 AT1G42610 transposable element gene -0.55 0.32 -0.3
68 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 0.55 0.34 -0.31
69 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 -0.55 0.33 -0.31
70 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.34 -0.3
71 AT2G26850 F-box family protein 0.55 0.31 -0.31
72 AT3G29775 transposable element gene -0.54 0.31 -0.33
73 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10		 -0.54 0.32 -0.34
74 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 0.54 0.32 -0.29
75 AT5G08200 peptidoglycan-binding LysM domain-containing protein -0.54 0.34 -0.31
76 AT3G16930 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.31 -0.33
77 AT1G08170 Histone superfamily protein -0.54 0.31 -0.32
78 AT4G36620 GATA transcription factor 19 GATA transcription factor 19,
hanaba taranu like 2		 -0.54 0.33 -0.33
79 AT4G15590 transposable element gene -0.54 0.34 -0.3
80 AT4G20420 Tapetum specific protein TAP35/TAP44 0.54 0.34 -0.32
81 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.54 0.31 -0.31
82 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.54 0.31 -0.32
83 AT1G79990 structural molecules -0.54 0.3 -0.32
84 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14		 0.53 0.33 -0.31
85 AT1G08100 nitrate transporter 2.2 ACH2, NITRATE TRANSPORTER 2.2,
nitrate transporter 2.2, NRT2;2AT		 -0.53 0.32 -0.34
86 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.29 -0.31
87 AT1G36430 transposable element gene 0.53 0.31 -0.33
88 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.53 0.33 -0.33
89 AT5G66710 Protein kinase superfamily protein -0.53 0.31 -0.3
90 AT3G58740 citrate synthase 1 citrate synthase 1 -0.53 0.33 -0.31
91 AT1G68270 AMP-dependent synthetase and ligase family protein -0.53 0.32 -0.32
92 AT4G19580 DNAJ heat shock N-terminal domain-containing protein -0.53 0.32 -0.31
93 AT5G52140 RING/U-box superfamily protein 0.53 0.34 -0.34
94 AT4G28900 transposable element gene 0.53 0.32 -0.3
95 AT1G54840 HSP20-like chaperones superfamily protein 0.52 0.3 -0.32
96 AT5G28090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.32 -0.31
97 AT1G21220 transposable element gene 0.52 0.3 -0.33
98 AT5G22900 cation/H+ exchanger 3 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 3, cation/H+ exchanger 3		 0.52 0.33 -0.3
99 AT1G65630 DegP protease 3 DegP protease 3 0.52 0.31 -0.31
100 AT4G02310 Galactose oxidase/kelch repeat superfamily protein -0.52 0.32 -0.31
101 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 -0.52 0.31 -0.32
102 ATMG01020 hypothetical protein ORF153B -0.52 0.31 -0.32
103 AT5G35960 Protein kinase family protein 0.52 0.32 -0.33
104 AT2G14170 aldehyde dehydrogenase 6B2 aldehyde dehydrogenase 6B2 0.52 0.3 -0.32
105 AT2G36020 HVA22-like protein J HVA22-like protein J 0.52 0.34 -0.3
106 AT2G13600 Pentatricopeptide repeat (PPR) superfamily protein -0.52 0.33 -0.29
107 AT2G35540 DNAJ heat shock N-terminal domain-containing protein -0.52 0.31 -0.33
108 AT2G41570 transposable element gene 0.52 0.32 -0.31
109 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein 0.51 0.31 -0.32
110 AT2G10380 transposable element gene 0.51 0.32 -0.32
111 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.51 0.33 -0.32
112 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 0.51 0.3 -0.32
113 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.51 0.32 -0.33
114 AT5G57830 Protein of unknown function, DUF593 0.5 0.31 -0.34
115 AT3G32040 Terpenoid synthases superfamily protein 0.5 0.31 -0.31
116 AT1G29490 SAUR-like auxin-responsive protein family 0.5 0.31 -0.33
117 AT3G20030 F-box and associated interaction domains-containing protein 0.5 0.31 -0.33
118 AT1G70360 F-box family protein 0.5 0.29 -0.29
119 AT3G30830 transposable element gene 0.5 0.31 -0.33
120 AT1G35740 pseudogene, similar to putative beta-1,3-glucan synthase,
blastp match of 57% identity and 2.1e-14 P-value to
GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative
beta-1,3-glucan synthase {Nicotiana alata}		 0.5 0.32 -0.29
121 AT3G05720 importin alpha isoform 7 importin alpha isoform 7 0.5 0.3 -0.31