AT1G54450 : -
Query Information
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AGICode AT1G54450
Description Calcium-binding EF-hand family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54450 Calcium-binding EF-hand family protein 1 0.3 -0.31
2 AT2G04420 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.72 0.3 -0.32
3 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.69 0.31 -0.32
4 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 0.68 0.32 -0.32
5 AT3G15870 Fatty acid desaturase family protein 0.67 0.32 -0.32
6 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.3 -0.3
7 AT3G10410 SERINE CARBOXYPEPTIDASE-LIKE 49 CARBOXYPEPTIDASE Y, SERINE
CARBOXYPEPTIDASE-LIKE 49		 -0.66 0.32 -0.33
8 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 0.66 0.32 -0.31
9 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.3 -0.28
10 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.3 -0.31
11 AT1G80110 phloem protein 2-B11 phloem protein 2-B11, phloem
protein 2-B11		 -0.65 0.33 -0.31
12 AT4G33980 BEST Arabidopsis thaliana protein match is: cold regulated
gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.31 -0.33
13 AT1G20696 high mobility group B3 high mobility group B3, NFD03,
NFD3		 -0.64 0.32 -0.33
14 AT5G38460 ALG6, ALG8 glycosyltransferase family 0.64 0.3 -0.32
15 AT3G13630 unknown protein; Has 21 Blast hits to 21 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.32
16 AT1G54730 Major facilitator superfamily protein 0.64 0.32 -0.32
17 AT5G48450 SKU5 similar 3 SKU5 similar 3 0.64 0.32 -0.32
18 AT3G42860 zinc knuckle (CCHC-type) family protein -0.64 0.32 -0.3
19 AT3G55740 proline transporter 2 PROLINE TRANSPORTER 2, proline
transporter 2		 -0.63 0.32 -0.31
20 AT5G35640 Putative endonuclease or glycosyl hydrolase 0.63 0.33 -0.33
21 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 0.63 0.34 -0.32
22 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 -0.63 0.33 -0.32
23 AT4G21560 vacuolar protein sorting-associated protein 28 homolog 1 vacuolar protein sorting 28,
vacuolar protein
sorting-associated protein 28
homolog 1		 -0.63 0.29 -0.33
24 AT4G00416 methyl-CPG-binding domain 3 methyl-CPG-binding domain 3 0.62 0.33 -0.31
25 AT5G55060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in
80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi
- 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33
(source: NCBI BLink).		 0.62 0.32 -0.33
26 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.62 0.33 -0.34
27 AT1G26800 RING/U-box superfamily protein -0.62 0.34 -0.31
28 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.62 0.3 -0.31
29 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 0.62 0.31 -0.29
30 AT4G13020 Protein kinase superfamily protein MHK 0.62 0.31 -0.33
31 AT5G42900 cold regulated gene 27 cold regulated gene 27 -0.61 0.3 -0.32
32 AT2G26630 transposable element gene 0.61 0.33 -0.3
33 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.61 0.31 -0.32
34 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 0.61 0.31 -0.33
35 AT5G28620 protein kinase C-related -0.61 0.31 -0.31
36 AT2G34850 NAD(P)-binding Rossmann-fold superfamily protein maternal effect embryo arrest 25 -0.61 0.32 -0.31
37 AT1G64890 Major facilitator superfamily protein -0.61 0.29 -0.33
38 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.32 -0.32
39 AT4G23110 insulin-like growth factor binding 0.6 0.31 -0.33
40 AT3G28960 Transmembrane amino acid transporter family protein 0.6 0.31 -0.33
41 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 -0.6 0.33 -0.3
42 AT5G65440 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G24610.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.3 -0.32
43 AT5G57690 diacylglycerol kinase 4 ATDGK4, diacylglycerol kinase 4 0.6 0.32 -0.31
44 AT1G67970 heat shock transcription factor A8 AT-HSFA8, heat shock transcription
factor A8		 -0.6 0.33 -0.31
45 AT2G23160 F-box family protein 0.6 0.31 -0.29
46 AT1G21670 LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller
(InterPro:IPR011659), Six-bladed beta-propeller, TolB-like
(InterPro:IPR011042); BEST Arabidopsis thaliana protein
match is: DPP6 N-terminal domain-like protein
(TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in
1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37;
Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes -
2591 (source: NCBI BLink).		 -0.59 0.3 -0.33
47 AT3G15310 transposable element gene 0.59 0.3 -0.33
48 AT1G21120 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 2		 -0.59 0.3 -0.32
49 AT5G22960 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.32
50 AT2G01630 O-Glycosyl hydrolases family 17 protein 0.59 0.31 -0.29
51 AT5G12430 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 16 0.59 0.32 -0.31
52 AT4G34990 myb domain protein 32 myb domain protein 32, myb domain
protein 32		 -0.59 0.32 -0.3
53 AT3G62700 multidrug resistance-associated protein 10 ATP-binding cassette C14,
multidrug resistance-associated
protein 10, multidrug
resistance-associated protein 10		 -0.59 0.29 -0.31
54 AT3G54940 Papain family cysteine protease -0.59 0.28 -0.31
55 AT5G47970 Aldolase-type TIM barrel family protein 0.59 0.29 -0.32
56 AT5G53080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.32 -0.34
57 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 0.58 0.32 -0.31
58 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.58 0.34 -0.31
59 AT2G40935 PLAC8 family protein -0.58 0.31 -0.32
60 AT2G17840 Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 -0.58 0.32 -0.33
61 AT2G20350 Integrase-type DNA-binding superfamily protein -0.57 0.3 -0.31
62 AT1G65590 beta-hexosaminidase 3 ATHEX1, beta-hexosaminidase 3 0.57 0.32 -0.33
63 AT3G46180 UDP-galactose transporter 5 UDP-GALACTOSE TRANSPORTER 5,
UDP-galactose transporter 5		 0.57 0.3 -0.29
64 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.3
65 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.32 -0.33
66 AT1G76180 Dehydrin family protein EARLY RESPONSE TO DEHYDRATION 14 -0.56 0.3 -0.3
67 AT3G08960 ARM repeat superfamily protein 0.56 0.31 -0.35
68 AT2G23640 Reticulan like protein B13 Reticulan like protein B13 -0.56 0.31 -0.3
69 AT3G30160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G35320.1); Has 9 Blast hits to 9 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.3 -0.32
70 AT1G01470 Late embryogenesis abundant protein LATE EMBRYOGENESIS ABUNDANT 14,
LIGHT STRESS-REGULATED 3		 -0.56 0.3 -0.32
71 AT2G14420 transposable element gene 0.56 0.31 -0.3
72 AT4G28703 RmlC-like cupins superfamily protein -0.56 0.3 -0.31
73 AT1G52560 HSP20-like chaperones superfamily protein -0.55 0.31 -0.28
74 AT2G01150 RING-H2 finger protein 2B RING-H2 finger protein 2B -0.55 0.34 -0.33
75 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.55 0.3 -0.31
76 AT1G08070 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3102, ORGANELLE
TRANSCRIPT PROCESSING 82		 -0.54 0.31 -0.3
77 AT2G24140 Protein of unknown function, DUF593 -0.54 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.81 0.46 -0.43 C0017