AT1G54240 : -
Query Information
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AGICode AT1G54240
Description winged-helix DNA-binding transcription factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 1 0.33 -0.33
2 AT5G22720 F-box/RNI-like superfamily protein -0.76 0.33 -0.31
3 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 -0.69 0.31 -0.32
4 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.68 0.34 -0.34
5 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.66 0.34 -0.32
6 AT2G21490 dehydrin LEA dehydrin LEA -0.66 0.3 -0.33
7 AT2G17975 zinc finger (Ran-binding) family protein -0.64 0.32 -0.31
8 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.64 0.31 -0.3
9 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.32 -0.32
10 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 -0.63 0.33 -0.32
11 AT1G61500 S-locus lectin protein kinase family protein -0.62 0.33 -0.33
12 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein -0.62 0.33 -0.32
13 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 0.62 0.31 -0.32
14 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.62 0.33 -0.32
15 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 -0.61 0.3 -0.32
16 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.61 0.3 -0.31
17 AT1G28160 Integrase-type DNA-binding superfamily protein 0.61 0.3 -0.34
18 AT2G13020 transposable element gene 0.61 0.29 -0.32
19 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.6 0.33 -0.32
20 AT1G62890 transposable element gene -0.6 0.31 -0.31
21 AT1G62914 pentatricopeptide (PPR) repeat-containing protein -0.6 0.32 -0.32
22 AT2G23420 nicotinate phosphoribosyltransferase 2 nicotinate
phosphoribosyltransferase 2		 -0.59 0.29 -0.3
23 AT3G02670 Glycine-rich protein family 0.59 0.32 -0.32
24 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.59 0.33 -0.31
25 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.59 0.3 -0.32
26 AT1G22860 Vacuolar sorting protein 39 -0.59 0.32 -0.31
27 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.59 0.3 -0.29
28 AT2G30925 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.3 -0.33
29 AT1G42250 transposable element gene -0.59 0.32 -0.31
30 AT4G34140 D111/G-patch domain-containing protein -0.59 0.32 -0.32
31 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.58 0.31 -0.32
32 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 -0.58 0.3 -0.31
33 AT2G17000 Mechanosensitive ion channel family protein -0.58 0.32 -0.31
34 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.31 -0.3
35 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.57 0.3 -0.32
36 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.3 -0.32
37 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 0.57 0.32 -0.32
38 ATCG01040 Cytochrome C assembly protein YCF5 -0.57 0.3 -0.3
39 AT1G34240 transposable element gene -0.57 0.32 -0.32
40 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.31 -0.32
41 AT1G75550 glycine-rich protein -0.57 0.31 -0.33
42 AT5G39390 Leucine-rich repeat protein kinase family protein 0.57 0.33 -0.28
43 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 -0.57 0.31 -0.32
44 AT2G21655 Protein of unknown function (DUF784) -0.57 0.31 -0.32
45 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.3 -0.31
46 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 0.56 0.31 -0.33
47 AT3G32060 transposable element gene 0.56 0.33 -0.31
48 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.56 0.31 -0.36
49 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.56 0.34 -0.34
50 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.55 0.32 -0.29
51 AT2G19060 SGNH hydrolase-type esterase superfamily protein 0.55 0.32 -0.31
52 AT4G12270 Copper amine oxidase family protein 0.55 0.32 -0.33
53 AT2G42930 Carbohydrate-binding X8 domain superfamily protein 0.55 0.3 -0.32
54 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 0.55 0.31 -0.33
55 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.55 0.32 -0.31
56 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.54 0.32 -0.32
57 AT3G53290 cytochrome P450, family 71, subfamily B, polypeptide 30
pseudogene		 cytochrome P450, family 71,
subfamily B, polypeptide 30
pseudogene		 0.54 0.32 -0.32
58 AT4G24050 NAD(P)-binding Rossmann-fold superfamily protein 0.54 0.33 -0.3
59 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.32 -0.29
60 AT3G22700 F-box and associated interaction domains-containing protein 0.54 0.3 -0.34
61 AT3G32000 transposable element gene 0.54 0.3 -0.31
62 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.31 -0.33
63 AT5G60070 ankyrin repeat family protein -0.54 0.31 -0.32
64 AT4G25660 PPPDE putative thiol peptidase family protein -0.53 0.31 -0.31
65 AT3G16220 Predicted eukaryotic LigT -0.53 0.31 -0.33
66 AT1G55390 Cysteine/Histidine-rich C1 domain family protein 0.53 0.32 -0.33
67 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha -0.53 0.34 -0.31
68 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.53 0.33 -0.32
69 AT4G33180 alpha/beta-Hydrolases superfamily protein -0.53 0.34 -0.3
70 AT5G37560 RING/U-box superfamily protein -0.53 0.31 -0.32
71 AT5G59940 Cysteine/Histidine-rich C1 domain family protein 0.52 0.3 -0.32
72 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein -0.52 0.32 -0.34
73 AT2G30630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.33 -0.33
74 AT5G67430 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.52 0.35 -0.31
75 AT5G62040 PEBP (phosphatidylethanolamine-binding protein) family
protein		 brother of FT and TFL1 -0.52 0.33 -0.32
76 AT1G03990 Long-chain fatty alcohol dehydrogenase family protein -0.52 0.32 -0.29
77 AT3G45060 high affinity nitrate transporter 2.6 ARABIDOPSIS THALIANA HIGH AFFINITY
NITRATE TRANSPORTER 2.6, high
affinity nitrate transporter 2.6		 -0.52 0.32 -0.29
78 AT3G22650 F-box and associated interaction domains-containing protein S-LOCUS F-BOX 61, CEGENDUO,
S-LOCUS F-BOX 61		 -0.52 0.32 -0.3
79 AT1G50160 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT2G04420.1); Has 34 Blast hits to 34 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.33 -0.32
80 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 0.52 0.32 -0.29
81 AT2G25640 SPOC domain / Transcription elongation factor S-II protein 0.52 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.77 0.47 -0.44 C0136