AT1G23400 : ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2
Query Information
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AGICode AT1G23400
Description RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G23400 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ARABIDOPSIS THALIANA HOMOLOG OF
MAIZE CAF2, CAF2		 1 0.33 -0.31
2 AT5G13730 sigma factor 4 sigma factor 4, SIGD 0.89 0.29 -0.3
3 AT3G23760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 20 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is:
transferases, transferring glycosyl groups
(TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi -
0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.88 0.31 -0.32
4 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.88 0.33 -0.31
5 AT4G15545 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.88 0.32 -0.31
6 AT4G25080 magnesium-protoporphyrin IX methyltransferase magnesium-protoporphyrin IX
methyltransferase		 0.87 0.34 -0.3
7 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.35 -0.29
8 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.87 0.31 -0.31
9 AT5G02710 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240
proteins in 73 species: Archae - 10; Bacteria - 110;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 95 (source: NCBI BLink).		 0.87 0.29 -0.3
10 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.87 0.31 -0.31
11 AT1G69935 short hypocotyl in white light1 SHORT HYPOCOTYL IN WHITE LIGHT1 0.87 0.33 -0.31
12 AT2G01620 RNI-like superfamily protein maternal effect embryo arrest 11 0.87 0.32 -0.32
13 AT3G51420 strictosidine synthase-like 4 STRICTOSIDINE SYNTHASE-LIKE 4,
strictosidine synthase-like 4		 0.87 0.31 -0.32
14 AT1G07440 NAD(P)-binding Rossmann-fold superfamily protein 0.87 0.32 -0.32
15 AT3G29240 Protein of unknown function (DUF179) 0.86 0.33 -0.33
16 AT4G14870 secE/sec61-gamma protein transport protein SECE1 0.86 0.3 -0.32
17 AT1G10360 glutathione S-transferase TAU 18 glutathione S-transferase TAU 18,
GLUTATHIONE S-TRANSFERASE 29,
glutathione S-transferase TAU 18		 0.86 0.35 -0.32
18 AT1G55360 Protein of Unknown Function (DUF239) 0.86 0.34 -0.29
19 AT2G47910 chlororespiratory reduction 6 chlororespiratory reduction 6 0.85 0.32 -0.31
20 AT1G12250 Pentapeptide repeat-containing protein 0.85 0.3 -0.31
21 AT2G17033 pentatricopeptide (PPR) repeat-containing protein 0.85 0.34 -0.35
22 AT3G02180 SPIRAL1-like3 SPIRAL1-like3 0.85 0.32 -0.29
23 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.85 0.32 -0.3
24 AT5G35790 glucose-6-phosphate dehydrogenase 1 glucose-6-phosphate dehydrogenase
1		 0.84 0.3 -0.34
25 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.84 0.28 -0.33
26 AT1G34640 peptidases 0.84 0.31 -0.3
27 AT3G20680 Domain of unknown function (DUF1995) 0.83 0.3 -0.32
28 AT3G14760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, LP.02 two
leaves visible; Has 63 Blast hits to 63 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.33 -0.3
29 AT5G47900 Protein of unknown function (DUF1624) 0.83 0.33 -0.32
30 AT5G52780 Protein of unknown function (DUF3464) 0.83 0.33 -0.33
31 AT4G37300 maternal effect embryo arrest 59 maternal effect embryo arrest 59 0.83 0.3 -0.3
32 AT2G29310 NAD(P)-binding Rossmann-fold superfamily protein 0.83 0.33 -0.33
33 AT4G30690 Translation initiation factor 3 protein 0.83 0.33 -0.32
34 AT4G33000 calcineurin B-like protein 10 ATCBL10, calcineurin B-like
protein 10, SOS3-LIKE CALCIUM
BINDING PROTEIN 8		 0.83 0.34 -0.31
35 AT1G17850 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.83 0.32 -0.32
36 AT2G41720 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2654 0.82 0.31 -0.33
37 AT5G13140 Pollen Ole e 1 allergen and extensin family protein 0.82 0.31 -0.31
38 AT4G33660 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.32 -0.3
39 AT4G17240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 8 growth stages; Has 1142 Blast hits to 1055
proteins in 252 species: Archae - 22; Bacteria - 318;
Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other
Eukaryotes - 396 (source: NCBI BLink).		 0.82 0.31 -0.3
40 AT3G47560 alpha/beta-Hydrolases superfamily protein 0.82 0.31 -0.31
41 AT4G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.82 0.29 -0.29
42 AT1G01170 Protein of unknown function (DUF1138) 0.82 0.32 -0.33
43 AT1G63260 tetraspanin10 tetraspanin10 0.82 0.31 -0.32
44 AT4G17540 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.32 -0.33
45 AT4G14540 nuclear factor Y, subunit B3 nuclear factor Y, subunit B3 0.82 0.31 -0.32
46 AT5G52190 Sugar isomerase (SIS) family protein 0.82 0.35 -0.32
47 AT5G67070 ralf-like 34 ralf-like 34 0.81 0.32 -0.31
48 AT5G16940 carbon-sulfur lyases 0.81 0.33 -0.3
49 AT1G20540 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.3
50 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 0.81 0.31 -0.32
51 AT1G49730 Protein kinase superfamily protein 0.81 0.31 -0.31
52 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.81 0.3 -0.31
53 AT3G11090 LOB domain-containing protein 21 LOB domain-containing protein 21 0.81 0.29 -0.3
54 AT4G38490 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.81 0.33 -0.32
55 AT2G15820 endonucleases ORGANELLE TRANSCRIPT PROCESSING 51 0.81 0.32 -0.32
56 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.81 0.3 -0.33
57 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase 0.81 0.32 -0.34
58 AT5G53760 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 11,
MILDEW RESISTANCE LOCUS O 11		 -0.8 0.32 -0.33
59 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.8 0.31 -0.32
60 AT5G09995 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.33 -0.3
61 AT4G09670 Oxidoreductase family protein 0.8 0.32 -0.32
62 AT1G51400 Photosystem II 5 kD protein 0.8 0.32 -0.33
63 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.8 0.31 -0.32
64 AT4G35760 NAD(P)H dehydrogenase (quinone)s 0.8 0.29 -0.32
65 AT2G35780 serine carboxypeptidase-like 26 serine carboxypeptidase-like 26 0.8 0.32 -0.34
66 AT5G48590 Protein of unknown function (DUF760) 0.8 0.31 -0.3
67 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE 0.8 0.3 -0.31
68 AT3G11750 Dihydroneopterin aldolase FOLB1 0.79 0.34 -0.32
69 AT2G35020 N-acetylglucosamine-1-phosphate uridylyltransferase 2 N-acetylglucosamine-1-phosphate
uridylyltransferase 2		 0.79 0.32 -0.34
70 AT1G23360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 MENG 0.79 0.3 -0.3
71 AT3G22420 with no lysine (K) kinase 2 ARABIDOPSIS THALIANA WITH NO K 2,
with no lysine (K) kinase 2, ZIK3		 0.79 0.32 -0.31
72 AT2G33255 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.79 0.3 -0.32
73 AT1G79720 Eukaryotic aspartyl protease family protein 0.79 0.31 -0.3
74 AT3G53250 SAUR-like auxin-responsive protein family 0.79 0.32 -0.32
75 AT1G67910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast
hits to 167 proteins in 19 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.31 -0.3
76 AT2G45740 peroxin 11D peroxin 11D 0.79 0.32 -0.3
77 AT1G76100 plastocyanin 1 plastocyanin 1 0.79 0.32 -0.32
78 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.79 0.32 -0.32
79 AT5G19290 alpha/beta-Hydrolases superfamily protein 0.79 0.3 -0.3
80 AT2G25830 YebC-related 0.79 0.33 -0.31
81 AT4G20830 FAD-binding Berberine family protein -0.77 0.33 -0.29
82 AT4G04860 DERLIN-2.2 DERLIN-2.2 -0.76 0.29 -0.31
83 AT5G11230 Nucleotide-sugar transporter family protein -0.76 0.32 -0.3
84 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 -0.76 0.28 -0.33
85 AT3G29310 calmodulin-binding protein-related -0.75 0.34 -0.32
86 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.74 0.33 -0.32
87 AT5G49280 hydroxyproline-rich glycoprotein family protein -0.74 0.33 -0.29
88 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 -0.73 0.32 -0.35
89 AT2G47890 B-box type zinc finger protein with CCT domain -0.73 0.31 -0.31
90 AT1G78340 glutathione S-transferase TAU 22 glutathione S-transferase TAU 22,
glutathione S-transferase TAU 22		 -0.73 0.31 -0.32
91 AT4G33430 BRI1-associated receptor kinase ATBAK1, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3,
BRI1-associated receptor kinase,
ELONGATED, RECEPTOR KINASES LIKE
SERK 10, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3		 -0.7 0.3 -0.34
92 AT1G30620 NAD(P)-binding Rossmann-fold superfamily protein HIGH SUGAR RESPONSE8, MURUS 4,
UDP-D-XYLOSE 4-EPIMERASE 1		 -0.69 0.31 -0.31
93 AT2G18200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G18210.1); Has 19 Blast hits to 19
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.68 0.32 -0.31
94 AT5G58210 hydroxyproline-rich glycoprotein family protein -0.68 0.31 -0.33
95 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.34 -0.34
96 AT1G06780 galacturonosyltransferase 6 galacturonosyltransferase 6 -0.66 0.3 -0.33
97 AT4G12120 Sec1/munc18-like (SM) proteins superfamily ATSEC1B, SEC1B -0.66 0.32 -0.3
98 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.66 0.32 -0.31
99 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.65 0.31 -0.31
100 AT5G49900 Beta-glucosidase, GBA2 type family protein -0.64 0.31 -0.33
101 AT4G19140 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.33 -0.29
102 AT4G37640 calcium ATPase 2 calcium ATPase 2 -0.64 0.34 -0.32
103 AT5G58700 phosphatidylinositol-speciwc phospholipase C4 ATPLC4,
phosphatidylinositol-speciwc
phospholipase C4		 -0.63 0.33 -0.29
104 AT1G27770 autoinhibited Ca2+-ATPase 1 autoinhibited Ca2+-ATPase 1,
PLASTID ENVELOPE ATPASE 1		 -0.63 0.32 -0.32
105 AT5G12270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.32 -0.32
106 AT2G30110 ubiquitin-activating enzyme 1 ubiquitin-activating enzyme 1,
MODIFIER OF SNC1 5,
ubiquitin-activating enzyme 1		 -0.63 0.3 -0.31