AGICode | AT2G05370 |
Description | BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G05370 | BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.33 | -0.32 | |||
2 | AT3G02500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.3 | -0.33 | |||
3 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | -0.65 | 0.32 | -0.32 | ||
4 | AT3G60260 | ELMO/CED-12 family protein | -0.65 | 0.32 | -0.34 | |||
5 | AT1G50950 | Thioredoxin protein with domain of unknown function (DUF1692) |
0.64 | 0.32 | -0.33 | |||
6 | AT3G18940 | clast3-related | -0.63 | 0.32 | -0.32 | |||
7 | AT2G40620 | Basic-leucine zipper (bZIP) transcription factor family protein |
-0.62 | 0.32 | -0.32 | |||
8 | AT1G19220 | auxin response factor 19 | AUXIN RESPONSE FACTOR11, auxin response factor 19, indole-3-acetic acid inducible 22 |
-0.6 | 0.33 | -0.31 | ||
9 | AT3G50010 | Cysteine/Histidine-rich C1 domain family protein | -0.6 | 0.33 | -0.3 | |||
10 | AT3G15040 | Protein of unknown function, DUF584 | -0.6 | 0.32 | -0.34 | |||
11 | AT1G07520 | GRAS family transcription factor | -0.59 | 0.29 | -0.33 | |||
12 | AT1G52380 | NUP50 (Nucleoporin 50 kDa) protein | -0.59 | 0.3 | -0.32 | |||
13 | AT2G40030 | nuclear RNA polymerase D1B | ATNRPD1B, DEFECTIVE IN MERISTEM SILENCING 5, DRD3, nuclear RNA polymerase D1B, NRPE1 |
0.59 | 0.32 | -0.32 | ||
14 | AT1G26270 | Phosphatidylinositol 3- and 4-kinase family protein | -0.58 | 0.34 | -0.32 | |||
15 | AT1G64040 | type one serine/threonine protein phosphatase 3 | type one serine/threonine protein phosphatase 3 |
-0.58 | 0.32 | -0.29 | ||
16 | AT2G19210 | Leucine-rich repeat transmembrane protein kinase protein | 0.58 | 0.34 | -0.32 | |||
17 | AT1G51160 | SNARE-like superfamily protein | -0.57 | 0.29 | -0.33 | |||
18 | AT1G51840 | protein kinase-related | -0.57 | 0.32 | -0.32 | |||
19 | AT5G29040 | pseudogene, hypothetical protein | 0.57 | 0.31 | -0.32 | |||
20 | AT3G50870 | GATA type zinc finger transcription factor family protein | GATA TRANSCRIPTION FACTOR 18, HANABA TANARU, MONOPOLE |
-0.56 | 0.32 | -0.3 | ||
21 | AT2G15920 | transposable element gene | 0.56 | 0.32 | -0.3 | |||
22 | AT1G03590 | Protein phosphatase 2C family protein | -0.56 | 0.3 | -0.33 | |||
23 | AT4G15410 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma |
serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma |
-0.56 | 0.33 | -0.32 | ||
24 | AT1G19370 | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
25 | AT5G57400 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.3 | -0.31 | |||
26 | AT1G17260 | autoinhibited H(+)-ATPase isoform 10 | autoinhibited H(+)-ATPase isoform 10 |
0.55 | 0.32 | -0.31 | ||
27 | AT4G39400 | Leucine-rich receptor-like protein kinase family protein | ATBRI1, BR INSENSITIVE 1, BRASSINOSTEROID INSENSITIVE 1, CABBAGE 2, DWARF 2 |
-0.54 | 0.33 | -0.3 | ||
28 | AT5G32490 | transposable element gene | 0.54 | 0.32 | -0.31 | |||
29 | AT5G45570 | Ulp1 protease family protein | 0.54 | 0.32 | -0.32 | |||
30 | AT2G37980 | O-fucosyltransferase family protein | -0.54 | 0.3 | -0.32 | |||
31 | AT3G02200 | Proteasome component (PCI) domain protein | -0.54 | 0.32 | -0.31 | |||
32 | AT2G31460 | Domain of unknown function (DUF313) | -0.53 | 0.31 | -0.34 | |||
33 | AT2G43700 | Concanavalin A-like lectin protein kinase family protein | 0.53 | 0.32 | -0.3 | |||
34 | AT5G53100 | NAD(P)-binding Rossmann-fold superfamily protein | -0.53 | 0.31 | -0.3 | |||
35 | AT5G17800 | myb domain protein 56 | myb domain protein 56, myb domain protein 56 |
-0.53 | 0.34 | -0.31 | ||
36 | AT2G17960 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.33 | -0.33 | |||
37 | AT5G28640 | SSXT family protein | ANGUSTIFOLIA 3, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GRF1-INTERACTING FACTOR, GRF1-INTERACTING FACTOR 1 |
-0.52 | 0.31 | -0.31 | ||
38 | AT5G62310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
INCOMPLETE ROOT HAIR ELONGATION | -0.51 | 0.32 | -0.34 |