AT2G17560 : high mobility group B4
Query Information
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AGICode AT2G17560
Description high mobility group B4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 1 0.31 -0.29
2 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 0.77 0.32 -0.3
3 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 0.75 0.32 -0.28
4 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 -0.75 0.32 -0.33
5 AT3G54250 GHMP kinase family protein 0.74 0.34 -0.33
6 AT3G28050 nodulin MtN21 /EamA-like transporter family protein -0.74 0.3 -0.32
7 AT3G03590 SWIB/MDM2 domain superfamily protein 0.74 0.32 -0.33
8 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.73 0.32 -0.32
9 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A 0.72 0.31 -0.3
10 AT3G57030 Calcium-dependent phosphotriesterase superfamily protein 0.72 0.31 -0.31
11 AT5G27350 Major facilitator superfamily protein SFP1 -0.72 0.3 -0.33
12 AT5G42850 Thioredoxin superfamily protein -0.72 0.31 -0.29
13 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 0.72 0.32 -0.31
14 AT1G31820 Amino acid permease family protein -0.72 0.32 -0.32
15 AT5G23810 amino acid permease 7 amino acid permease 7 -0.71 0.34 -0.32
16 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 0.71 0.3 -0.32
17 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 -0.71 0.3 -0.31
18 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 0.71 0.32 -0.29
19 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.71 0.33 -0.3
20 AT2G46610 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31a, arginine/serine-rich
splicing factor 31a		 -0.71 0.32 -0.31
21 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 0.7 0.31 -0.35
22 AT1G07630 pol-like 5 pol-like 5 -0.7 0.32 -0.3
23 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 0.7 0.31 -0.32
24 AT1G15660 centromere protein C CENP-C HOMOLOGUE, centromere
protein C		 0.7 0.32 -0.31
25 AT2G17220 Protein kinase superfamily protein kinase 3 -0.7 0.32 -0.35
26 AT3G55005 tonneau 1b (TON1b) tonneau 1b 0.69 0.3 -0.31
27 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 0.69 0.32 -0.3
28 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 0.69 0.34 -0.3
29 AT3G01360 Family of unknown function (DUF716) -0.68 0.3 -0.32
30 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 0.68 0.29 -0.32
31 AT2G38730 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.68 0.3 -0.32
32 AT1G32860 Glycosyl hydrolase superfamily protein 0.68 0.32 -0.3
33 AT3G14890 phosphoesterase 0.68 0.31 -0.32
34 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.68 0.29 -0.32
35 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.32 -0.32
36 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 0.67 0.31 -0.33
37 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 0.67 0.32 -0.31
38 AT1G10540 nucleobase-ascorbate transporter 8 ATNAT8, nucleobase-ascorbate
transporter 8		 -0.67 0.29 -0.3
39 AT5G13520 peptidase M1 family protein 0.67 0.33 -0.3
40 AT3G27200 Cupredoxin superfamily protein 0.67 0.3 -0.29
41 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.31 -0.32
42 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.67 0.32 -0.32
43 AT1G47670 Transmembrane amino acid transporter family protein 0.67 0.32 -0.32
44 AT5G45590 Ribosomal protein L35 0.66 0.31 -0.33
45 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 0.66 0.32 -0.31
46 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.31 -0.34
47 AT4G31140 O-Glycosyl hydrolases family 17 protein 0.66 0.32 -0.33
48 AT1G18330 Homeodomain-like superfamily protein EARLY-PHYTOCHROME-RESPONSIVE1,
REVEILLE 7		 0.66 0.33 -0.3
49 AT4G35220 Cyclase family protein -0.66 0.29 -0.31
50 AT4G24960 HVA22 homologue D ARABIDOPSIS THALIANA HVA22
HOMOLOGUE D, HVA22 homologue D		 0.66 0.3 -0.3
51 AT5G40390 Raffinose synthase family protein raffinose synthase 5, seed
imbibition 1-like		 0.66 0.3 -0.33
52 AT2G07690 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 5 0.66 0.33 -0.31
53 AT1G12370 photolyase 1 photolyase 1, UV RESISTANCE 2 0.66 0.31 -0.32
54 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.66 0.29 -0.32
55 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.66 0.31 -0.32
56 AT2G32520 alpha/beta-Hydrolases superfamily protein -0.65 0.3 -0.33
57 AT5G09470 dicarboxylate carrier 3 dicarboxylate carrier 3 -0.65 0.34 -0.32
58 AT4G01010 cyclic nucleotide-gated channel 13 CYCLIC NUCLEOTIDE-GATED CHANNEL
13, cyclic nucleotide-gated
channel 13		 -0.65 0.31 -0.32
59 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 0.65 0.32 -0.32
60 AT2G27970 CDK-subunit 2 CDK-subunit 2 0.65 0.29 -0.3
61 AT5G46070 Guanylate-binding family protein 0.65 0.3 -0.32
62 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.32 -0.33
63 AT4G10890 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2439 (InterPro:IPR018838); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.32 -0.32
64 AT2G16940 Splicing factor, CC1-like 0.64 0.32 -0.31
65 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).		 EMBRYO DEFECTIVE 2795 0.64 0.3 -0.3
66 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 0.64 0.32 -0.33
67 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.64 0.31 -0.31
68 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 0.64 0.32 -0.35
69 AT3G60900 FASCICLIN-like arabinogalactan-protein 10 FASCICLIN-like
arabinogalactan-protein 10		 0.64 0.3 -0.29
70 AT4G16442 Uncharacterised protein family (UPF0497) 0.64 0.33 -0.31
71 AT5G61520 Major facilitator superfamily protein -0.64 0.32 -0.31
72 AT1G25320 Leucine-rich repeat protein kinase family protein 0.64 0.33 -0.3
73 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 -0.63 0.31 -0.32
74 AT1G28320 protease-related DEG15 -0.63 0.32 -0.33
75 AT4G03960 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP4, plant and fungi
atypical dual-specificity
phosphatase 4		 -0.63 0.32 -0.33
76 AT1G55090 carbon-nitrogen hydrolase family protein -0.63 0.33 -0.31
77 AT4G28320 Glycosyl hydrolase superfamily protein AtMAN5, endo-beta-mannase 5 0.63 0.3 -0.31
78 AT4G31360 selenium binding 0.63 0.31 -0.32
79 AT1G02090 Proteasome component (PCI) domain protein ARABIDOPSIS THALIANA COP9
SIGNALOSOME SUBUNIT 7,
CONSTITUTIVE PHOTOMORPHOGENIC 15,
COP9 SIGNALOSOME SUBUNIT 7, FUSCA
5		 0.63 0.32 -0.3
80 AT1G80350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AAA1, ATKTN1, BOTERO 1, ECTOPIC
ROOT HAIR 3, FRAGILE FIBER 2,
FURCA2, FAT ROOT, KATANIN 1, LUE1		 0.63 0.32 -0.31
81 AT3G51970 acyl-CoA sterol acyl transferase 1 acyl-CoA sterol acyl transferase
1, ATASAT1, ARABIDOPSIS THALIANA
STEROL O-ACYLTRANSFERASE 1		 -0.63 0.31 -0.33
82 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 -0.62 0.3 -0.32
83 AT3G11500 Small nuclear ribonucleoprotein family protein 0.62 0.3 -0.32
84 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.62 0.31 -0.31
85 AT5G48600 structural maintenance of chromosome 3 ARABIDOPSIS THALIANA CHROMOSOME
ASSOCIATED PROTEIN-C, structural
maintenance of chromosome 3,
ARABIDOPSIS THALIANA STRUCTURAL
MAINTENANCE OF CHROMOSOME 4,
structural maintenance of
chromosome 3		 0.62 0.3 -0.29
86 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.62 0.31 -0.32
87 AT2G01680 Ankyrin repeat family protein -0.62 0.29 -0.31
88 AT1G67720 Leucine-rich repeat protein kinase family protein -0.62 0.33 -0.31
89 AT1G66530 Arginyl-tRNA synthetase, class Ic 0.62 0.33 -0.32
90 AT4G38400 expansin-like A2 expansin-like A2, ATEXPL2, ATHEXP
BETA 2.2, expansin-like A2,
EXPANSIN L2		 0.62 0.33 -0.34
91 AT1G17340 Phosphoinositide phosphatase family protein -0.62 0.31 -0.32
92 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 0.62 0.32 -0.31
93 AT4G14300 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.31 -0.32
94 AT1G68440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits
to 86 proteins in 29 species: Archae - 0; Bacteria - 6;
Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 -0.62 0.31 -0.32
95 AT1G20440 cold-regulated 47 AtCOR47, cold-regulated 47, RD17 0.61 0.31 -0.31
96 AT2G19130 S-locus lectin protein kinase family protein -0.61 0.32 -0.31
97 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.3 -0.3
98 AT3G06450 HCO3- transporter family -0.61 0.29 -0.32
99 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 0.61 0.32 -0.31
100 AT3G16950 lipoamide dehydrogenase 1 lipoamide dehydrogenase 1, ptlpd1 0.61 0.31 -0.34
101 AT5G47910 respiratory burst oxidase homologue D ATRBOHD, respiratory burst oxidase
homologue D		 -0.61 0.29 -0.3
102 AT3G25840 Protein kinase superfamily protein -0.61 0.3 -0.33
103 AT5G19670 Exostosin family protein 0.61 0.35 -0.33
104 AT2G02100 low-molecular-weight cysteine-rich 69 low-molecular-weight cysteine-rich
69, PDF2.2		 0.61 0.31 -0.31
105 AT4G12010 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.3 -0.31
106 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.61 0.3 -0.31
107 AT1G31910 GHMP kinase family protein -0.61 0.32 -0.3
108 AT2G43970 RNA-binding protein -0.61 0.33 -0.32
109 AT4G00310 Putative membrane lipoprotein EMBRYO SAC DEVELOPMENT ARREST 8,
MATERNAL EFFECT EMBRYO ARREST 46		 0.61 0.31 -0.31
110 AT1G54410 dehydrin family protein 0.61 0.32 -0.31
111 AT2G42490 Copper amine oxidase family protein -0.61 0.31 -0.3
112 AT4G29540 bacterial transferase hexapeptide repeat-containing protein AtLpxA, LpxA 0.61 0.32 -0.31
113 AT5G55810 nicotinate/nicotinamide mononucleotide adenyltransferase nicotinate/nicotinamide
mononucleotide adenyltransferase,
nicotinate/nicotinamide
mononucleotide adenyltransferase		 -0.61 0.31 -0.32
114 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.6 0.32 -0.31
115 AT4G16590 cellulose synthase-like A01 cellulose synthase-like A01,
CELLULOSE SYNTHASE-LIKE A1,
CSLA01, cellulose synthase-like
A01		 -0.6 0.33 -0.32
116 AT5G53360 TRAF-like superfamily protein -0.6 0.3 -0.33
117 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.6 0.32 -0.31
118 AT1G52880 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 18, ATNAM, NO APICAL
MERISTEM, NAC-REGULATED SEED
MORPHOLOGY 2		 -0.6 0.33 -0.3
119 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 -0.6 0.31 -0.3
120 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 -0.6 0.32 -0.31
121 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.59 0.32 -0.32
122 AT1G75810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		0.73 0.45 -0.43 C0118