AGICode | AT2G16090 |
Description | RING/U-box superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G16090 | RING/U-box superfamily protein | ARIADNE 2, ARABIDOPSIS ARIADNE 2 | 1 | 0.3 | -0.32 | ||
2 | AT1G10900 | Phosphatidylinositol-4-phosphate 5-kinase family protein | 0.71 | 0.31 | -0.32 | |||
3 | AT2G45100 | Cyclin/Brf1-like TBP-binding protein | 0.7 | 0.3 | -0.32 | |||
4 | AT4G16500 | Cystatin/monellin superfamily protein | -0.68 | 0.31 | -0.32 | |||
5 | AT3G12840 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.68 | 0.33 | -0.33 | |||
6 | AT4G13020 | Protein kinase superfamily protein | MHK | 0.68 | 0.33 | -0.31 | ||
7 | AT5G55300 | DNA topoisomerase I alpha | MGOUN 1, TOPOISOMERASE 1, DNA topoisomerase I alpha |
0.67 | 0.34 | -0.33 | ||
8 | AT5G03250 | Phototropic-responsive NPH3 family protein | 0.66 | 0.33 | -0.31 | |||
9 | AT1G55200 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
0.66 | 0.33 | -0.32 | |||
10 | AT3G17360 | phragmoplast orienting kinesin 1 | phragmoplast orienting kinesin 1 | 0.66 | 0.31 | -0.31 | ||
11 | AT2G30400 | ovate family protein 2 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2, ovate family protein 2 |
-0.66 | 0.29 | -0.31 | ||
12 | AT3G56600 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.29 | |||
13 | AT4G33370 | DEA(D/H)-box RNA helicase family protein | -0.65 | 0.3 | -0.31 | |||
14 | AT2G15790 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase |
CYCLOPHILIN 40, SQUINT | -0.65 | 0.3 | -0.3 | ||
15 | AT3G22950 | ADP-ribosylation factor C1 | ADP-ribosylation factor C1, ADP-ribosylation factor C1 |
-0.65 | 0.3 | -0.31 | ||
16 | AT3G58770 | unknown protein; Has 38 Blast hits to 36 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.65 | 0.31 | -0.34 | |||
17 | AT4G17260 | Lactate/malate dehydrogenase family protein | -0.65 | 0.3 | -0.32 | |||
18 | AT2G23940 | Protein of unknown function (DUF788) | -0.64 | 0.33 | -0.32 | |||
19 | AT5G22360 | vesicle-associated membrane protein 714 | vesicle-associated membrane protein 714, VAMP714, vesicle-associated membrane protein 714 |
-0.64 | 0.32 | -0.31 | ||
20 | AT3G52560 | ubiquitin E2 variant 1D-4 | MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN E2 VARIANT 1D, ubiquitin E2 variant 1D-4 |
-0.64 | 0.34 | -0.3 | ||
21 | AT4G36790 | Major facilitator superfamily protein | -0.64 | 0.31 | -0.3 | |||
22 | AT3G47670 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.64 | 0.32 | -0.3 | |||
23 | AT5G55610 | unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.64 | 0.32 | -0.32 | |||
24 | AT2G03320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.34 | -0.33 | |||
25 | AT1G63300 | Myosin heavy chain-related protein | 0.64 | 0.3 | -0.31 | |||
26 | AT4G11130 | RNA-dependent RNA polymerase 2 | RNA-dependent RNA polymerase 2, SILENCING MOVEMENT DEFICIENT 1 |
0.64 | 0.31 | -0.32 | ||
27 | AT3G60260 | ELMO/CED-12 family protein | -0.64 | 0.33 | -0.31 | |||
28 | AT1G09920 | TRAF-type zinc finger-related | -0.64 | 0.33 | -0.33 | |||
29 | AT1G47260 | gamma carbonic anhydrase 2 | APFI, gamma carbonic anhydrase 2 | -0.63 | 0.32 | -0.34 | ||
30 | AT2G29700 | pleckstrin homologue 1 | pleckstrin homologue 1, pleckstrin homologue 1 |
-0.63 | 0.33 | -0.3 | ||
31 | AT3G01340 | Transducin/WD40 repeat-like superfamily protein | -0.63 | 0.32 | -0.3 | |||
32 | AT5G48270 | Plant protein of unknown function (DUF868) | 0.63 | 0.32 | -0.33 | |||
33 | AT1G63640 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain |
0.63 | 0.3 | -0.32 | |||
34 | AT1G01230 | ORMDL family protein | -0.63 | 0.32 | -0.29 | |||
35 | AT3G44050 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.63 | 0.32 | -0.29 | |||
36 | AT4G00420 | Double-stranded RNA-binding domain (DsRBD)-containing protein |
-0.63 | 0.31 | -0.3 | |||
37 | AT2G23080 | Protein kinase superfamily protein | casein kinase II, alpha chain 3 | -0.63 | 0.31 | -0.32 | ||
38 | AT3G28480 | Oxoglutarate/iron-dependent oxygenase | -0.63 | 0.3 | -0.3 | |||
39 | AT5G50960 | nucleotide binding protein 35 | NUCLEOTIDE BINDING PROTEIN 35, nucleotide binding protein 35 |
-0.63 | 0.33 | -0.32 | ||
40 | AT2G35590 | pseudogene, serpin (serine protease inhibitor), putative, similar to protein zx (Hordeum vulgare subsp. vulgare) GI:19071, serpin (Triticum aestivum) GI:1885346; contains Pfam profile PF00079: Serpin (serine protease inhibitor); this is very likely a pseudogene.; blastp match of 52% identity and 2.2e-73 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} |
-0.62 | 0.31 | -0.31 | |||
41 | AT1G51620 | Protein kinase superfamily protein | -0.62 | 0.3 | -0.3 | |||
42 | AT2G47970 | Nuclear pore localisation protein NPL4 | -0.62 | 0.31 | -0.31 | |||
43 | AT4G03790 | transposable element gene | 0.62 | 0.3 | -0.31 | |||
44 | AT4G08030 | transposable element gene | -0.62 | 0.33 | -0.32 | |||
45 | AT3G15930 | Pentatricopeptide repeat (PPR) superfamily protein | 0.62 | 0.3 | -0.33 | |||
46 | AT3G13410 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.62 | 0.31 | -0.33 | |||
47 | AT3G07400 | lipase class 3 family protein | 0.62 | 0.3 | -0.31 | |||
48 | AT5G05850 | plant intracellular ras group-related LRR 1 | plant intracellular ras group-related LRR 1 |
-0.62 | 0.29 | -0.31 | ||
49 | AT1G11130 | Leucine-rich repeat protein kinase family protein | SCRAMBLED, STRUBBELIG-RECEPTOR FAMILY 9, STRUBBELIG |
0.62 | 0.31 | -0.3 | ||
50 | AT5G03320 | Protein kinase superfamily protein | -0.62 | 0.34 | -0.32 | |||
51 | AT1G23570 | Domain of unknown function (DUF220) | -0.62 | 0.31 | -0.31 | |||
52 | AT4G14920 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
0.62 | 0.33 | -0.33 | |||
53 | AT5G50930 | Histone superfamily protein | -0.62 | 0.3 | -0.31 | |||
54 | AT4G08710 | transposable element gene | -0.62 | 0.33 | -0.32 | |||
55 | AT2G10020 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.33 | -0.31 | |||
56 | AT4G20290 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
57 | AT3G01880 | Plant protein of unknown function (DUF946) | 0.61 | 0.3 | -0.33 | |||
58 | AT3G13840 | GRAS family transcription factor | 0.61 | 0.36 | -0.31 | |||
59 | AT4G08650 | transposable element gene | 0.61 | 0.3 | -0.31 | |||
60 | AT3G42070 | transposable element gene | 0.61 | 0.31 | -0.32 | |||
61 | AT3G57340 | Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) |
-0.61 | 0.33 | -0.33 | |||
62 | AT1G80780 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.61 | 0.32 | -0.31 | |||
63 | AT3G51580 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to 1607 proteins in 294 species: Archae - 2; Bacteria - 552; Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38; Other Eukaryotes - 253 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 | |||
64 | AT5G65930 | kinesin-like calmodulin-binding protein (ZWICHEL) | KINESIN-LIKE CALMODULIN-BINDING PROTEIN, POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, ZWICHEL |
0.61 | 0.29 | -0.33 | ||
65 | AT1G19120 | Small nuclear ribonucleoprotein family protein | -0.61 | 0.31 | -0.32 | |||
66 | AT5G06410 | DNAJ heat shock N-terminal domain-containing protein | -0.61 | 0.32 | -0.31 | |||
67 | AT1G31650 | RHO guanyl-nucleotide exchange factor 14 | ATROPGEF14, RHO guanyl-nucleotide exchange factor 14 |
0.61 | 0.32 | -0.32 | ||
68 | AT1G47830 | SNARE-like superfamily protein | -0.6 | 0.3 | -0.32 | |||
69 | AT1G31810 | Formin Homology 14 | Formin Homology 14 | 0.6 | 0.32 | -0.33 | ||
70 | AT3G45810 | ferric reductase-like transmembrane component family protein |
0.6 | 0.33 | -0.31 | |||
71 | AT5G22960 | alpha/beta-Hydrolases superfamily protein | 0.6 | 0.33 | -0.32 | |||
72 | AT5G43000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
73 | AT3G29200 | chorismate mutase 1 | ARABIDOPSIS THALIANA CHORISMATE MUTASE 1, chorismate mutase 1 |
-0.6 | 0.3 | -0.31 | ||
74 | AT1G80790 | XH/XS domain-containing protein | factor of DNA methylation 5 | 0.6 | 0.3 | -0.32 | ||
75 | AT1G09930 | oligopeptide transporter 2 | oligopeptide transporter 2, oligopeptide transporter 2 |
-0.6 | 0.34 | -0.32 | ||
76 | AT1G11130 | Leucine-rich repeat protein kinase family protein | SCRAMBLED, STRUBBELIG-RECEPTOR FAMILY 9, STRUBBELIG |
0.6 | 0.33 | -0.3 | ||
77 | AT4G21550 | VP1/ABI3-like 3 | VP1/ABI3-like 3 | 0.59 | 0.31 | -0.31 | ||
78 | AT3G13065 | STRUBBELIG-receptor family 4 | STRUBBELIG-receptor family 4 | 0.59 | 0.32 | -0.31 | ||
79 | AT1G28250 | unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.3 | |||
80 | AT4G18500 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.33 | -0.29 | |||
81 | AT4G02730 | Transducin/WD40 repeat-like superfamily protein | AtWDR5b, human WDR5 (WD40 repeat) homolog b |
-0.59 | 0.31 | -0.34 | ||
82 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
0.59 | 0.31 | -0.31 | ||
83 | AT5G15870 | glycosyl hydrolase family 81 protein | -0.59 | 0.31 | -0.32 | |||
84 | AT2G21780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits to 13 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
85 | AT3G43500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.3 | |||
86 | AT5G28620 | protein kinase C-related | -0.59 | 0.33 | -0.33 | |||
87 | AT1G26260 | cryptochrome-interacting basic-helix-loop-helix 5 | cryptochrome-interacting basic-helix-loop-helix 5 |
0.59 | 0.28 | -0.31 | ||
88 | AT2G22630 | AGAMOUS-like 17 | AGAMOUS-like 17 | -0.59 | 0.33 | -0.32 | ||
89 | AT1G05070 | Protein of unknown function (DUF1068) | -0.59 | 0.31 | -0.31 | |||
90 | AT2G40070 | BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.59 | 0.32 | -0.3 | |||
91 | AT3G45590 | splicing endonuclease 1 | splicing endonuclease 1, splicing endonuclease 1 |
-0.59 | 0.32 | -0.33 | ||
92 | AT3G61690 | nucleotidyltransferases | 0.58 | 0.35 | -0.32 | |||
93 | AT1G14970 | O-fucosyltransferase family protein | 0.58 | 0.29 | -0.34 | |||
94 | AT5G01270 | carboxyl-terminal domain (ctd) phosphatase-like 2 | ATCPL2, carboxyl-terminal domain (ctd) phosphatase-like 2 |
0.58 | 0.34 | -0.31 | ||
95 | AT1G44050 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.29 | -0.34 | |||
96 | AT4G17330 | G2484-1 protein | G2484-1 protein, G2484-1 protein | 0.58 | 0.35 | -0.31 | ||
97 | AT2G21870 | copper ion binding;cobalt ion binding;zinc ion binding | MALE GAMETOPHYTE DEFECTIVE 1 | -0.58 | 0.33 | -0.31 | ||
98 | AT5G60210 | ROP interactive partner 5 | ROP interactive partner 5 | 0.57 | 0.32 | -0.33 | ||
99 | AT3G53690 | RING/U-box superfamily protein | -0.57 | 0.31 | -0.32 | |||
100 | AT3G49050 | alpha/beta-Hydrolases superfamily protein | 0.57 | 0.3 | -0.28 | |||
101 | AT1G21730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.57 | 0.33 | -0.3 | |||
102 | AT4G17310 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
103 | AT5G58550 | ETO1-like 2 | ETO1-like 2 | 0.57 | 0.29 | -0.32 | ||
104 | AT2G41100 | Calcium-binding EF hand family protein | ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TOUCH 3 |
-0.57 | 0.31 | -0.3 | ||
105 | AT1G11250 | syntaxin of plants 125 | ATSYP125, syntaxin of plants 125 | -0.57 | 0.33 | -0.31 | ||
106 | AT5G50370 | Adenylate kinase family protein | -0.57 | 0.31 | -0.29 | |||
107 | AT5G64350 | FK506-binding protein 12 | ARABIDOPSIS THALIANA FK506-BINDING PROTEIN 12, FK506-binding protein 12, FKP12 |
-0.57 | 0.29 | -0.32 | ||
108 | AT1G40230 | transposable element gene | 0.57 | 0.31 | -0.3 | |||
109 | AT5G54750 | Transport protein particle (TRAPP) component | -0.57 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
110 | C0185 | MST_3139.9 | - | - | - | -0.62 | 0.46 | -0.46 |