AGICode | AT2G16200 |
Description | structural molecules |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G16200 | structural molecules | 1 | 0.32 | -0.31 | |||
2 | AT4G37950 | Rhamnogalacturonate lyase family protein | 0.74 | 0.33 | -0.33 | |||
3 | AT5G08190 | nuclear factor Y, subunit B12 | nuclear factor Y, subunit B12 | -0.71 | 0.34 | -0.31 | ||
4 | AT5G66890 | Leucine-rich repeat (LRR) family protein | 0.71 | 0.29 | -0.34 | |||
5 | AT2G03320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.32 | -0.3 | |||
6 | AT1G37537 | transposable element gene | 0.69 | 0.33 | -0.29 | |||
7 | AT4G05500 | pseudogene, F-box protein family, AtFBL9/AtFBL23, contains similarity to N7 protein GI:3273101 from (Medicago truncatula); blastp match of 39% identity and 1.6e-34 P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein {Medicago truncatula} |
0.68 | 0.31 | -0.34 | |||
8 | AT4G36370 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.29 | -0.31 | |||
9 | AT1G48095 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 | |||
10 | AT4G35170 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.66 | 0.34 | -0.32 | |||
11 | AT1G54720 | early-responsive to dehydration protein-related / ERD protein-related |
0.66 | 0.32 | -0.32 | |||
12 | AT2G10620 | transposable element gene | -0.66 | 0.32 | -0.31 | |||
13 | AT1G23570 | Domain of unknown function (DUF220) | -0.66 | 0.31 | -0.33 | |||
14 | AT2G36700 | Pectin lyase-like superfamily protein | 0.65 | 0.32 | -0.31 | |||
15 | AT2G16010 | transposable element gene | -0.65 | 0.31 | -0.31 | |||
16 | AT3G23350 | ENTH/VHS family protein | 0.64 | 0.32 | -0.3 | |||
17 | AT3G54490 | RNA polymerase II fifth largest subunit, E | RNA polymerase II fifth largest subunit, E |
0.64 | 0.31 | -0.3 | ||
18 | AT5G39310 | expansin A24 | ATEXP24, expansin A24, ATHEXP ALPHA 1.19, EXPANSIN 24, expansin A24 |
-0.64 | 0.29 | -0.31 | ||
19 | AT4G30540 | Class I glutamine amidotransferase-like superfamily protein | -0.64 | 0.31 | -0.33 | |||
20 | AT3G15930 | Pentatricopeptide repeat (PPR) superfamily protein | 0.64 | 0.33 | -0.34 | |||
21 | AT5G17480 | pollen calcium-binding protein 1 | pollen calcium-binding protein 1, pollen calcium-binding protein 1 |
-0.63 | 0.32 | -0.32 | ||
22 | AT3G62880 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
ATOEP16-4 | -0.63 | 0.32 | -0.33 | ||
23 | AT4G22620 | SAUR-like auxin-responsive protein family | -0.63 | 0.32 | -0.3 | |||
24 | AT4G19850 | lectin-related | ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-A2, phloem protein 2-A2, PP2A2 |
-0.63 | 0.32 | -0.3 | ||
25 | AT3G46400 | Leucine-rich repeat protein kinase family protein | 0.63 | 0.31 | -0.32 | |||
26 | AT4G25010 | Nodulin MtN3 family protein | AtSWEET14, SWEET14 | 0.62 | 0.33 | -0.32 | ||
27 | AT4G20200 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
0.62 | 0.32 | -0.33 | |||
28 | AT3G22920 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.62 | 0.31 | -0.32 | |||
29 | AT1G72570 | Integrase-type DNA-binding superfamily protein | -0.62 | 0.31 | -0.31 | |||
30 | AT5G53690 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.33 | -0.32 | |||
31 | AT4G27300 | S-locus lectin protein kinase family protein | 0.62 | 0.32 | -0.33 | |||
32 | AT4G22940 | Protein kinase superfamily protein | 0.61 | 0.34 | -0.32 | |||
33 | AT1G20480 | AMP-dependent synthetase and ligase family protein | -0.61 | 0.32 | -0.31 | |||
34 | AT2G16040 | hAT dimerisation domain-containing protein / transposase-related |
-0.61 | 0.33 | -0.32 | |||
35 | AT3G26790 | AP2/B3-like transcriptional factor family protein | FUSCA 3 | -0.61 | 0.3 | -0.3 | ||
36 | AT1G54955 | transposable element gene | -0.61 | 0.3 | -0.33 | |||
37 | AT2G25600 | Shaker pollen inward K+ channel | AKT6, Shaker pollen inward K+ channel |
0.61 | 0.32 | -0.33 | ||
38 | AT1G18280 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.6 | 0.32 | -0.33 | |||
39 | AT4G20080 | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
-0.6 | 0.31 | -0.32 | |||
40 | AT5G48390 | Tetratricopeptide repeat (TPR)-like superfamily protein | ATZIP4 | -0.59 | 0.32 | -0.34 | ||
41 | AT3G11870 | Endoribonuclease/protein kinase IRE1-like | 0.59 | 0.31 | -0.31 | |||
42 | AT1G02670 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.31 | -0.3 | |||
43 | AT4G00130 | DNA-binding storekeeper protein-related transcriptional regulator |
-0.59 | 0.3 | -0.31 | |||
44 | AT3G28120 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.59 | 0.34 | -0.29 | |||
45 | AT1G33900 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.32 | -0.33 | |||
46 | AT1G02340 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
FBI1, LONG HYPOCOTYL IN FAR-RED, REDUCED PHYTOCHROME SIGNALING 1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 |
-0.58 | 0.29 | -0.33 | ||
47 | AT3G32280 | ATP-dependent helicase family protein | -0.58 | 0.32 | -0.33 | |||
48 | AT2G06020 | Homeodomain-like superfamily protein | -0.58 | 0.32 | -0.33 | |||
49 | AT5G57570 | GCK domain-containing protein | -0.58 | 0.3 | -0.3 | |||
50 | AT1G08630 | threonine aldolase 1 | threonine aldolase 1 | -0.58 | 0.32 | -0.32 | ||
51 | AT4G22030 | F-box family protein with a domain of unknown function (DUF295) |
0.57 | 0.3 | -0.32 | |||
52 | AT1G79660 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.31 | -0.32 | |||
53 | AT5G36990 | transposable element gene | 0.57 | 0.3 | -0.32 | |||
54 | AT2G39520 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.31 | -0.31 | |||
55 | AT3G61720 | Ca2+dependent plant phosphoribosyltransferase family protein |
-0.57 | 0.32 | -0.33 | |||
56 | AT4G08030 | transposable element gene | -0.57 | 0.3 | -0.34 | |||
57 | AT1G32980 | Subtilisin-like serine endopeptidase family protein | 0.57 | 0.34 | -0.29 | |||
58 | AT1G55220 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.32 | -0.3 | |||
59 | AT4G11720 | hapless 2 | GENERATIVE CELL-SPECIFIC 1, HAPLESS 2 |
-0.57 | 0.31 | -0.35 | ||
60 | AT3G18910 | EIN2 targeting protein2 | EIN2 targeting protein2 | -0.57 | 0.35 | -0.32 | ||
61 | AT1G04560 | AWPM-19-like family protein | -0.57 | 0.31 | -0.3 | |||
62 | AT4G09360 | NB-ARC domain-containing disease resistance protein | 0.57 | 0.32 | -0.34 | |||
63 | AT2G20550 | HSP40/DnaJ peptide-binding protein | -0.57 | 0.33 | -0.31 | |||
64 | AT5G61980 | ARF-GAP domain 1 | ARF-GAP domain 1 | -0.56 | 0.33 | -0.32 | ||
65 | AT3G08880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). |
-0.56 | 0.29 | -0.32 | |||
66 | AT3G25490 | Protein kinase family protein | 0.56 | 0.32 | -0.31 | |||
67 | AT1G32610 | hydroxyproline-rich glycoprotein family protein | 0.56 | 0.3 | -0.31 | |||
68 | AT3G23030 | indole-3-acetic acid inducible 2 | indole-3-acetic acid inducible 2 | -0.56 | 0.3 | -0.32 | ||
69 | AT4G13070 | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.56 | 0.29 | -0.29 | |||
70 | AT1G35183 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.32 | |||
71 | AT5G58003 | C-terminal domain phosphatase-like 4 | C-terminal domain phosphatase-like 4 |
-0.56 | 0.3 | -0.29 | ||
72 | AT5G44770 | Cysteine/Histidine-rich C1 domain family protein | 0.55 | 0.32 | -0.32 | |||
73 | AT1G11040 | HSP40/DnaJ peptide-binding protein | -0.55 | 0.3 | -0.31 | |||
74 | AT1G19170 | Pectin lyase-like superfamily protein | 0.55 | 0.32 | -0.31 | |||
75 | AT1G76210 | Arabidopsis protein of unknown function (DUF241) | -0.55 | 0.31 | -0.3 | |||
76 | AT1G72660 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.55 | 0.31 | -0.3 | |||
77 | AT1G32040 | transposable element gene | -0.54 | 0.31 | -0.34 | |||
78 | AT3G16857 | response regulator 1 | response regulator 1, response regulator 1 |
0.54 | 0.32 | -0.33 | ||
79 | AT4G15090 | FRS (FAR1 Related Sequences) transcription factor family | FAR-RED IMPAIRED RESPONSE 1 | -0.54 | 0.33 | -0.31 | ||
80 | AT1G07705 | NOT2 / NOT3 / NOT5 family | 0.54 | 0.3 | -0.32 | |||
81 | AT3G46920 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.54 | 0.31 | -0.32 | |||
82 | AT4G23960 | F-box family protein | 0.54 | 0.3 | -0.33 | |||
83 | ATMG01410 | open reading frame 204 | open reading frame 204 | -0.54 | 0.34 | -0.31 | ||
84 | AT1G69500 | cytochrome P450, family 704, subfamily B, polypeptide 1 | cytochrome P450, family 704, subfamily B, polypeptide 1 |
-0.53 | 0.32 | -0.32 | ||
85 | AT5G20460 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.53 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
86 | C0196 | Phosphatidylcholine-34:3 | - | Phosphatidylcholine-34:3 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
0.66 | 0.45 | -0.47 |